Protein–RNA interactions for Protein: O00257

CBX4, E3 SUMO-protein ligase CBX4, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4O00257 SNORA32.2-201ENST00000384049 122 ntBASIC4.48□□□□□ -1.69
CBX4O00257 SNORA70C-201ENST00000384538 135 ntBASIC4.48□□□□□ -1.69
CBX4O00257 MIR23B-201ENST00000384832 97 ntBASIC4.48□□□□□ -1.69
CBX4O00257 MIR514A2-201ENST00000385131 88 ntBASIC4.48□□□□□ -1.69
CBX4O00257 MIR514A3-201ENST00000385132 88 ntBASIC4.48□□□□□ -1.69
CBX4O00257 RNU6-510P-201ENST00000391239 108 ntBASIC4.48□□□□□ -1.69
CBX4O00257 AC097374.1-203ENST00000400783 485 ntBASIC4.48□□□□□ -1.69
CBX4O00257 RNU4-46P-201ENST00000410818 138 ntBASIC4.48□□□□□ -1.69
CBX4O00257 ARL5AP1-201ENST00000418991 388 ntBASIC4.48□□□□□ -1.69
CBX4O00257 AC018630.2-202ENST00000422992 927 ntBASIC4.48□□□□□ -1.69
CBX4O00257 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.48□□□□□ -1.69
CBX4O00257 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.48□□□□□ -1.69
CBX4O00257 FABP5P13-201ENST00000452144 328 ntBASIC4.48□□□□□ -1.69
CBX4O00257 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.48□□□□□ -1.69
CBX4O00257 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CBX4O00257 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.48□□□□□ -1.69
CBX4O00257 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
CBX4O00257 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.48□□□□□ -1.69
CBX4O00257 AF186190.1-201ENST00000517470 480 ntBASIC4.48□□□□□ -1.69
CBX4O00257 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CBX4O00257 AC078814.3-201ENST00000553036 491 ntBASIC4.48□□□□□ -1.69
CBX4O00257 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.48□□□□□ -1.69
CBX4O00257 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CBX4O00257 Z98200.1-201ENST00000607298 470 ntBASIC4.48□□□□□ -1.69
CBX4O00257 SNORD91B-202ENST00000608459 222 ntBASIC4.48□□□□□ -1.69
CBX4O00257 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CBX4O00257 AL136221.1-201ENST00000621449 509 ntBASIC4.48□□□□□ -1.69
CBX4O00257 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CBX4O00257 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CBX4O00257 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.48□□□□□ -1.69
CBX4O00257 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CBX4O00257 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CBX4O00257 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CBX4O00257 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CBX4O00257 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CBX4O00257 AC027290.2-201ENST00000623210 18662 ntBASIC4.48□□□□□ -1.69
CBX4O00257 SCN1A-220ENST00000641603 12506 ntBASIC4.48□□□□□ -1.69
CBX4O00257 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CBX4O00257 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CBX4O00257 LINC01109-201ENST00000603837 3081 ntBASIC4.47□□□□□ -1.69
CBX4O00257 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
CBX4O00257 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.47□□□□□ -1.69
CBX4O00257 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CBX4O00257 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CBX4O00257 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CBX4O00257 RNU6-629P-201ENST00000384061 103 ntBASIC4.47□□□□□ -1.69
CBX4O00257 RNU1-44P-201ENST00000384453 163 ntBASIC4.47□□□□□ -1.69
CBX4O00257 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.47□□□□□ -1.69
CBX4O00257 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.47□□□□□ -1.69
CBX4O00257 AC008850.1-201ENST00000427546 362 ntBASIC4.47□□□□□ -1.69
CBX4O00257 AL365400.1-201ENST00000431854 640 ntBASIC4.47□□□□□ -1.69
CBX4O00257 OR4C10P-201ENST00000434991 931 ntBASIC4.47□□□□□ -1.69
CBX4O00257 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.47□□□□□ -1.69
CBX4O00257 RPL23AP52-201ENST00000439311 478 ntBASIC4.47□□□□□ -1.69
CBX4O00257 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.47□□□□□ -1.69
CBX4O00257 NEFMP1-201ENST00000443423 1006 ntBASIC4.47□□□□□ -1.69
CBX4O00257 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.47□□□□□ -1.69
CBX4O00257 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.47□□□□□ -1.69
CBX4O00257 AC007547.1-201ENST00000462177 490 ntBASIC4.47□□□□□ -1.69
CBX4O00257 RPL21P8-201ENST00000465083 535 ntBASIC4.47□□□□□ -1.69
CBX4O00257 RPL35AP15-201ENST00000468042 339 ntBASIC4.47□□□□□ -1.69
CBX4O00257 RPL7P19-201ENST00000469948 618 ntBASIC4.47□□□□□ -1.69
CBX4O00257 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.47□□□□□ -1.69
CBX4O00257 SNORA31.22-201ENST00000517204 135 ntBASIC4.47□□□□□ -1.69
CBX4O00257 BTF3P12-201ENST00000519620 469 ntBASIC4.47□□□□□ -1.69
CBX4O00257 MTND4P7-201ENST00000523876 130 ntBASIC4.47□□□□□ -1.69
CBX4O00257 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.47□□□□□ -1.69
CBX4O00257 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.47□□□□□ -1.69
CBX4O00257 AC037471.2-201ENST00000564941 598 ntBASIC4.47□□□□□ -1.69
CBX4O00257 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
CBX4O00257 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.47□□□□□ -1.69
CBX4O00257 VN1R80P-201ENST00000597126 338 ntBASIC4.47□□□□□ -1.69
CBX4O00257 RPL7P50-201ENST00000600588 727 ntBASIC4.47□□□□□ -1.69
CBX4O00257 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.47□□□□□ -1.69
CBX4O00257 AC010201.1-201ENST00000605051 540 ntBASIC4.47□□□□□ -1.69
CBX4O00257 RNU6-89P-201ENST00000606519 100 ntBASIC4.47□□□□□ -1.69
CBX4O00257 AC023043.4-201ENST00000612081 449 ntBASIC4.47□□□□□ -1.69
CBX4O00257 AC004696.1-201ENST00000614345 607 ntBASIC4.47□□□□□ -1.69
CBX4O00257 uc_338.34-201ENST00000617467 174 ntBASIC4.47□□□□□ -1.69
CBX4O00257 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.47□□□□□ -1.69
CBX4O00257 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
CBX4O00257 AC009248.2-201ENST00000619826 254 ntBASIC4.47□□□□□ -1.69
CBX4O00257 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.47□□□□□ -1.69
CBX4O00257 AL359697.1-201ENST00000624879 587 ntBASIC4.47□□□□□ -1.69
CBX4O00257 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.47□□□□□ -1.69
CBX4O00257 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.47□□□□□ -1.69
CBX4O00257 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CBX4O00257 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.47□□□□□ -1.69
CBX4O00257 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.47□□□□□ -1.69
CBX4O00257 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CBX4O00257 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
CBX4O00257 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
CBX4O00257 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.46□□□□□ -1.69
CBX4O00257 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
CBX4O00257 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.46□□□□□ -1.69
CBX4O00257 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CBX4O00257 RNA5SP307-201ENST00000362863 116 ntBASIC4.46□□□□□ -1.7
CBX4O00257 Y_RNA.100-201ENST00000363141 102 ntBASIC4.46□□□□□ -1.7
CBX4O00257 RNU4-20P-201ENST00000365601 151 ntBASIC4.46□□□□□ -1.7
CBX4O00257 RNU6-1279P-201ENST00000383917 103 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms