Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AL158042.1-201ENST00000605338 460 ntBASIC2.84□□□□□ -1.95
SMIM28A0A1B0GU29 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.84□□□□□ -1.95
SMIM28A0A1B0GU29 MIR6817-201ENST00000615588 66 ntBASIC2.84□□□□□ -1.95
SMIM28A0A1B0GU29 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.84□□□□□ -1.95
SMIM28A0A1B0GU29 AL360181.4-201ENST00000621752 134 ntBASIC2.84□□□□□ -1.95
SMIM28A0A1B0GU29 AC023510.2-201ENST00000622162 746 ntBASIC2.84□□□□□ -1.95
SMIM28A0A1B0GU29 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.84□□□□□ -1.95
SMIM28A0A1B0GU29 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
SMIM28A0A1B0GU29 AP000526.1-201ENST00000603308 1388 ntBASIC2.84□□□□□ -1.96
SMIM28A0A1B0GU29 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
SMIM28A0A1B0GU29 ZNF876P-202ENST00000398732 1485 ntBASIC2.84□□□□□ -1.96
SMIM28A0A1B0GU29 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
SMIM28A0A1B0GU29 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
SMIM28A0A1B0GU29 AC097714.1-201ENST00000511272 1647 ntBASIC2.83□□□□□ -1.96
SMIM28A0A1B0GU29 RNU6-777P-201ENST00000364265 104 ntBASIC2.83□□□□□ -1.96
SMIM28A0A1B0GU29 U3.12-201ENST00000364498 214 ntBASIC2.83□□□□□ -1.96
SMIM28A0A1B0GU29 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SMIM28A0A1B0GU29 RNU6-757P-201ENST00000410334 100 ntBASIC2.83□□□□□ -1.96
SMIM28A0A1B0GU29 RPLP0P7-201ENST00000416050 667 ntBASIC2.83□□□□□ -1.96
SMIM28A0A1B0GU29 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.83□□□□□ -1.96
SMIM28A0A1B0GU29 AC099677.1-201ENST00000420575 175 ntBASIC2.83□□□□□ -1.96
SMIM28A0A1B0GU29 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.83□□□□□ -1.96
SMIM28A0A1B0GU29 AL953862.1-201ENST00000423016 168 ntBASIC2.83□□□□□ -1.96
SMIM28A0A1B0GU29 MTCO2P17-201ENST00000424336 677 ntBASIC2.83□□□□□ -1.96
SMIM28A0A1B0GU29 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.83□□□□□ -1.96
SMIM28A0A1B0GU29 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.83□□□□□ -1.96
SMIM28A0A1B0GU29 AC244505.4-201ENST00000434905 287 ntBASIC2.83□□□□□ -1.96
SMIM28A0A1B0GU29 RABEPKP1-201ENST00000440529 1026 ntBASIC2.83□□□□□ -1.96
SMIM28A0A1B0GU29 SSXP5-201ENST00000443473 287 ntBASIC2.83□□□□□ -1.96
SMIM28A0A1B0GU29 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.83□□□□□ -1.96
SMIM28A0A1B0GU29 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.83□□□□□ -1.96
SMIM28A0A1B0GU29 HMGB1P36-201ENST00000487709 576 ntBASIC2.83□□□□□ -1.96
SMIM28A0A1B0GU29 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.83□□□□□ -1.96
SMIM28A0A1B0GU29 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.83□□□□□ -1.96
SMIM28A0A1B0GU29 COX7A2P2-201ENST00000505291 250 ntBASIC2.83□□□□□ -1.96
SMIM28A0A1B0GU29 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.83□□□□□ -1.96
SMIM28A0A1B0GU29 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.83□□□□□ -1.96
SMIM28A0A1B0GU29 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.83□□□□□ -1.96
SMIM28A0A1B0GU29 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.83□□□□□ -1.96
SMIM28A0A1B0GU29 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
SMIM28A0A1B0GU29 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.83□□□□□ -1.96
SMIM28A0A1B0GU29 AC022861.1-201ENST00000522981 663 ntBASIC2.83□□□□□ -1.96
SMIM28A0A1B0GU29 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.83□□□□□ -1.96
SMIM28A0A1B0GU29 AC018630.1-201ENST00000541376 925 ntBASIC2.83□□□□□ -1.96
SMIM28A0A1B0GU29 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.83□□□□□ -1.96
SMIM28A0A1B0GU29 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC2.83□□□□□ -1.96
SMIM28A0A1B0GU29 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.83□□□□□ -1.96
SMIM28A0A1B0GU29 AC009220.3-201ENST00000604318 586 ntBASIC2.83□□□□□ -1.96
SMIM28A0A1B0GU29 AL356585.4-201ENST00000623078 1229 ntBASIC2.83□□□□□ -1.96
SMIM28A0A1B0GU29 CR381653.2-201ENST00000624041 768 ntBASIC2.83□□□□□ -1.96
SMIM28A0A1B0GU29 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.83□□□□□ -1.96
SMIM28A0A1B0GU29 SNORA50A-202ENST00000629536 136 ntBASIC2.83□□□□□ -1.96
SMIM28A0A1B0GU29 AC243829.7-201ENST00000633081 225 ntBASIC2.83□□□□□ -1.96
SMIM28A0A1B0GU29 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.83□□□□□ -1.96
SMIM28A0A1B0GU29 AL390862.1-201ENST00000635467 1469 ntBASIC2.83□□□□□ -1.96
SMIM28A0A1B0GU29 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SMIM28A0A1B0GU29 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.83□□□□□ -1.96
SMIM28A0A1B0GU29 AC092326.2-201ENST00000624772 1561 ntBASIC2.83□□□□□ -1.96
SMIM28A0A1B0GU29 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SMIM28A0A1B0GU29 AC108206.1-201ENST00000570186 4159 ntBASIC2.82□□□□□ -1.96
SMIM28A0A1B0GU29 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SMIM28A0A1B0GU29 AL079343.1-201ENST00000572358 1771 ntBASIC2.82□□□□□ -1.96
SMIM28A0A1B0GU29 AC008264.2-201ENST00000610193 3731 ntBASIC2.82□□□□□ -1.96
SMIM28A0A1B0GU29 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SMIM28A0A1B0GU29 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SMIM28A0A1B0GU29 CYCSP45-201ENST00000402289 315 ntBASIC2.82□□□□□ -1.96
SMIM28A0A1B0GU29 AL591034.1-201ENST00000407447 340 ntBASIC2.82□□□□□ -1.96
SMIM28A0A1B0GU29 AL008987.1-201ENST00000415528 237 ntBASIC2.82□□□□□ -1.96
SMIM28A0A1B0GU29 MTATP6P27-201ENST00000416987 621 ntBASIC2.82□□□□□ -1.96
SMIM28A0A1B0GU29 MTCYBP38-201ENST00000417160 1123 ntBASIC2.82□□□□□ -1.96
SMIM28A0A1B0GU29 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC2.82□□□□□ -1.96
SMIM28A0A1B0GU29 HIGD1AP11-201ENST00000438361 280 ntBASIC2.82□□□□□ -1.96
SMIM28A0A1B0GU29 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.82□□□□□ -1.96
SMIM28A0A1B0GU29 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SMIM28A0A1B0GU29 AC103975.1-201ENST00000482506 483 ntBASIC2.82□□□□□ -1.96
SMIM28A0A1B0GU29 RN7SL283P-201ENST00000489055 303 ntBASIC2.82□□□□□ -1.96
SMIM28A0A1B0GU29 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.82□□□□□ -1.96
SMIM28A0A1B0GU29 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.82□□□□□ -1.96
SMIM28A0A1B0GU29 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.82□□□□□ -1.96
SMIM28A0A1B0GU29 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.82□□□□□ -1.96
SMIM28A0A1B0GU29 AC010265.1-201ENST00000513509 211 ntBASIC2.82□□□□□ -1.96
SMIM28A0A1B0GU29 RNA5SP148-201ENST00000516527 94 ntBASIC2.82□□□□□ -1.96
SMIM28A0A1B0GU29 MRPS36P3-201ENST00000519284 130 ntBASIC2.82□□□□□ -1.96
SMIM28A0A1B0GU29 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
SMIM28A0A1B0GU29 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SMIM28A0A1B0GU29 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SMIM28A0A1B0GU29 MTND1P24-201ENST00000552175 861 ntBASIC2.82□□□□□ -1.96
SMIM28A0A1B0GU29 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.82□□□□□ -1.96
SMIM28A0A1B0GU29 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC2.82□□□□□ -1.96
SMIM28A0A1B0GU29 AC009712.1-201ENST00000564938 316 ntBASIC2.82□□□□□ -1.96
SMIM28A0A1B0GU29 AC234778.2-201ENST00000566241 354 ntBASIC2.82□□□□□ -1.96
SMIM28A0A1B0GU29 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.82□□□□□ -1.96
SMIM28A0A1B0GU29 AC004853.1-201ENST00000604902 698 ntBASIC2.82□□□□□ -1.96
SMIM28A0A1B0GU29 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.82□□□□□ -1.96
SMIM28A0A1B0GU29 AC080013.4-201ENST00000607624 649 ntBASIC2.82□□□□□ -1.96
SMIM28A0A1B0GU29 AL139418.1-201ENST00000613613 177 ntBASIC2.82□□□□□ -1.96
SMIM28A0A1B0GU29 AC231657.1-201ENST00000624313 397 ntBASIC2.82□□□□□ -1.96
SMIM28A0A1B0GU29 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SMIM28A0A1B0GU29 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.82□□□□□ -1.96
SMIM28A0A1B0GU29 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms