Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
TRBV4-1A0A0J9YWV2 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
TRBV4-1A0A0J9YWV2 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.04□□□□□ -1.92
TRBV4-1A0A0J9YWV2 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.04□□□□□ -1.92
TRBV4-1A0A0J9YWV2 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 U3.11-201ENST00000364476 212 ntBASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 MIR591-201ENST00000385290 95 ntBASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 RN7SKP111-201ENST00000410349 271 ntBASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 RNU4-65P-201ENST00000410473 140 ntBASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 Y_RNA.598-201ENST00000410480 95 ntBASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 HMGB3P23-201ENST00000414981 585 ntBASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 RPL22P17-201ENST00000438729 315 ntBASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 Z99127.3-201ENST00000448158 395 ntBASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 RPL21P104-201ENST00000464143 478 ntBASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 MTND4LP3-201ENST00000468320 276 ntBASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 RPS4XP13-201ENST00000483219 789 ntBASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 AC068724.1-201ENST00000487100 792 ntBASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 AC109464.2-201ENST00000510242 943 ntBASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 AC104619.4-201ENST00000510773 249 ntBASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 RNA5SP468-201ENST00000516782 93 ntBASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 COX6CP3-201ENST00000580869 223 ntBASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 AP001029.3-201ENST00000588063 596 ntBASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 AC011468.4-201ENST00000603942 409 ntBASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 AL359999.1-201ENST00000604513 294 ntBASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 AC245008.1-201ENST00000608123 476 ntBASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 AC004908.2-201ENST00000609090 574 ntBASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 AL391813.2-201ENST00000609113 322 ntBASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 AC108747.1-201ENST00000609508 535 ntBASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 AL356321.1-201ENST00000621360 228 ntBASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 AC019226.1-201ENST00000625666 515 ntBASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.03□□□□□ -1.92
TRBV4-1A0A0J9YWV2 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
TRBV4-1A0A0J9YWV2 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 RNU4-35P-201ENST00000362588 141 ntBASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 Y_RNA.51-201ENST00000362725 102 ntBASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 RNU6-223P-201ENST00000362830 107 ntBASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 RN7SKP280-201ENST00000364196 304 ntBASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 RNU6-432P-201ENST00000384196 109 ntBASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 Y_RNA.553-201ENST00000384670 102 ntBASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 RNA5SP229-201ENST00000410809 99 ntBASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 HMGN1P24-201ENST00000412282 298 ntBASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 HMGN1P14-201ENST00000412459 517 ntBASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 RPL21P32-201ENST00000419877 477 ntBASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AL445584.1-201ENST00000431451 330 ntBASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 HMGB1P12-201ENST00000438594 598 ntBASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AP000936.2-201ENST00000447151 681 ntBASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 RBMY2UP-201ENST00000453474 324 ntBASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 MTCO2P18-201ENST00000457151 658 ntBASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 RNU7-59P-201ENST00000459101 61 ntBASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 RN7SL385P-201ENST00000468873 276 ntBASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC108860.1-201ENST00000484521 383 ntBASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 KCTD9P5-201ENST00000504141 1170 ntBASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 AC010424.1-201ENST00000506336 297 ntBASIC3.02□□□□□ -1.93
TRBV4-1A0A0J9YWV2 FCF1P8-201ENST00000510322 597 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 143.2 ms