Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
TRAV1-1A0A0B4J248 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.66□□□□□ -2.14
TRAV1-1A0A0B4J248 AC022336.2-201ENST00000568966 2538 ntBASIC1.66□□□□□ -2.14
TRAV1-1A0A0B4J248 OR5J1P-201ENST00000313544 939 ntBASIC1.66□□□□□ -2.14
TRAV1-1A0A0B4J248 MIR525-201ENST00000384978 85 ntBASIC1.66□□□□□ -2.14
TRAV1-1A0A0B4J248 RPA3-203ENST00000401447 414 ntTSL 3 BASIC1.66□□□□□ -2.14
TRAV1-1A0A0B4J248 AL355497.1-201ENST00000406262 551 ntBASIC1.66□□□□□ -2.14
TRAV1-1A0A0B4J248 RNU4-72P-201ENST00000410754 173 ntBASIC1.66□□□□□ -2.14
TRAV1-1A0A0B4J248 RNU6-193P-201ENST00000410977 107 ntBASIC1.66□□□□□ -2.14
TRAV1-1A0A0B4J248 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC1.66□□□□□ -2.14
TRAV1-1A0A0B4J248 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.66□□□□□ -2.14
TRAV1-1A0A0B4J248 MTND4LP14-201ENST00000429447 288 ntBASIC1.66□□□□□ -2.14
TRAV1-1A0A0B4J248 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.66□□□□□ -2.14
TRAV1-1A0A0B4J248 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.66□□□□□ -2.14
TRAV1-1A0A0B4J248 AC090774.1-201ENST00000435925 246 ntBASIC1.66□□□□□ -2.14
TRAV1-1A0A0B4J248 AL451074.3-201ENST00000437709 472 ntBASIC1.66□□□□□ -2.14
TRAV1-1A0A0B4J248 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC1.66□□□□□ -2.14
TRAV1-1A0A0B4J248 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.66□□□□□ -2.14
TRAV1-1A0A0B4J248 AC092798.1-201ENST00000458542 409 ntBASIC1.66□□□□□ -2.14
TRAV1-1A0A0B4J248 SNORD109B-201ENST00000458961 67 ntBASIC1.66□□□□□ -2.14
TRAV1-1A0A0B4J248 SNORD109A-201ENST00000459128 67 ntBASIC1.66□□□□□ -2.14
TRAV1-1A0A0B4J248 RPL31P41-201ENST00000477967 372 ntBASIC1.66□□□□□ -2.14
TRAV1-1A0A0B4J248 RN7SL432P-201ENST00000484057 298 ntBASIC1.66□□□□□ -2.14
TRAV1-1A0A0B4J248 RPS15AP34-201ENST00000487776 387 ntBASIC1.66□□□□□ -2.14
TRAV1-1A0A0B4J248 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC1.66□□□□□ -2.14
TRAV1-1A0A0B4J248 RPL30P5-201ENST00000494923 336 ntBASIC1.66□□□□□ -2.14
TRAV1-1A0A0B4J248 AC093767.1-201ENST00000504523 156 ntBASIC1.66□□□□□ -2.14
TRAV1-1A0A0B4J248 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.66□□□□□ -2.14
TRAV1-1A0A0B4J248 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.66□□□□□ -2.14
TRAV1-1A0A0B4J248 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC1.66□□□□□ -2.14
TRAV1-1A0A0B4J248 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.66□□□□□ -2.14
TRAV1-1A0A0B4J248 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC1.66□□□□□ -2.14
TRAV1-1A0A0B4J248 BPTFP1-201ENST00000579209 492 ntBASIC1.66□□□□□ -2.14
TRAV1-1A0A0B4J248 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC1.66□□□□□ -2.14
TRAV1-1A0A0B4J248 AC026790.2-201ENST00000606282 430 ntBASIC1.66□□□□□ -2.14
TRAV1-1A0A0B4J248 AC025588.4-201ENST00000615802 908 ntBASIC1.66□□□□□ -2.14
TRAV1-1A0A0B4J248 MIR1264-201ENST00000616374 69 ntBASIC1.66□□□□□ -2.14
TRAV1-1A0A0B4J248 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.66□□□□□ -2.14
TRAV1-1A0A0B4J248 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC1.66□□□□□ -2.14
TRAV1-1A0A0B4J248 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
TRAV1-1A0A0B4J248 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.66□□□□□ -2.14
TRAV1-1A0A0B4J248 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.66□□□□□ -2.14
TRAV1-1A0A0B4J248 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.65□□□□□ -2.14
TRAV1-1A0A0B4J248 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.65□□□□□ -2.15
TRAV1-1A0A0B4J248 RNU6-251P-201ENST00000363235 104 ntBASIC1.65□□□□□ -2.15
TRAV1-1A0A0B4J248 RNU6-461P-201ENST00000364195 107 ntBASIC1.65□□□□□ -2.15
TRAV1-1A0A0B4J248 SNORA68.1-201ENST00000364537 132 ntBASIC1.65□□□□□ -2.15
TRAV1-1A0A0B4J248 SNORA51.6-201ENST00000384151 125 ntBASIC1.65□□□□□ -2.15
TRAV1-1A0A0B4J248 Y_RNA.510-201ENST00000384511 114 ntBASIC1.65□□□□□ -2.15
TRAV1-1A0A0B4J248 RNU6-882P-201ENST00000391025 103 ntBASIC1.65□□□□□ -2.15
TRAV1-1A0A0B4J248 RNU6-796P-201ENST00000391086 107 ntBASIC1.65□□□□□ -2.15
TRAV1-1A0A0B4J248 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.65□□□□□ -2.15
TRAV1-1A0A0B4J248 RNA5SP489-201ENST00000410986 109 ntBASIC1.65□□□□□ -2.15
TRAV1-1A0A0B4J248 TRIM60P5Y-201ENST00000413946 574 ntBASIC1.65□□□□□ -2.15
TRAV1-1A0A0B4J248 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.65□□□□□ -2.15
TRAV1-1A0A0B4J248 AC236972.1-201ENST00000433225 199 ntBASIC1.65□□□□□ -2.15
TRAV1-1A0A0B4J248 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.65□□□□□ -2.15
TRAV1-1A0A0B4J248 AC092170.1-201ENST00000440211 356 ntBASIC1.65□□□□□ -2.15
TRAV1-1A0A0B4J248 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC1.65□□□□□ -2.15
TRAV1-1A0A0B4J248 AL139109.1-201ENST00000455491 297 ntBASIC1.65□□□□□ -2.15
TRAV1-1A0A0B4J248 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC1.65□□□□□ -2.15
TRAV1-1A0A0B4J248 SNORA59A-201ENST00000459326 152 ntBASIC1.65□□□□□ -2.15
TRAV1-1A0A0B4J248 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.65□□□□□ -2.15
TRAV1-1A0A0B4J248 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.65□□□□□ -2.15
TRAV1-1A0A0B4J248 AC234781.5-201ENST00000508429 271 ntBASIC1.65□□□□□ -2.15
TRAV1-1A0A0B4J248 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
TRAV1-1A0A0B4J248 RNA5SP356-201ENST00000515972 94 ntBASIC1.65□□□□□ -2.15
TRAV1-1A0A0B4J248 RNU5A-7P-201ENST00000515979 116 ntBASIC1.65□□□□□ -2.15
TRAV1-1A0A0B4J248 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC1.65□□□□□ -2.15
TRAV1-1A0A0B4J248 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC1.65□□□□□ -2.15
TRAV1-1A0A0B4J248 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
TRAV1-1A0A0B4J248 MTCYBP20-201ENST00000524239 1129 ntBASIC1.65□□□□□ -2.15
TRAV1-1A0A0B4J248 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC1.65□□□□□ -2.15
TRAV1-1A0A0B4J248 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.65□□□□□ -2.15
TRAV1-1A0A0B4J248 GLYCAM1-201ENST00000546596 285 ntBASIC1.65□□□□□ -2.15
TRAV1-1A0A0B4J248 AC106734.1-201ENST00000568646 663 ntBASIC1.65□□□□□ -2.15
TRAV1-1A0A0B4J248 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.65□□□□□ -2.15
TRAV1-1A0A0B4J248 MIR3921-201ENST00000577308 85 ntBASIC1.65□□□□□ -2.15
TRAV1-1A0A0B4J248 MIR4435-1-201ENST00000582552 80 ntBASIC1.65□□□□□ -2.15
TRAV1-1A0A0B4J248 OR1M4P-201ENST00000589199 287 ntBASIC1.65□□□□□ -2.15
TRAV1-1A0A0B4J248 AL136363.1-201ENST00000605349 337 ntBASIC1.65□□□□□ -2.15
TRAV1-1A0A0B4J248 AC046143.2-201ENST00000609789 160 ntBASIC1.65□□□□□ -2.15
TRAV1-1A0A0B4J248 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.65□□□□□ -2.15
TRAV1-1A0A0B4J248 AC009090.3-201ENST00000616553 565 ntBASIC1.65□□□□□ -2.15
TRAV1-1A0A0B4J248 AL031601.2-202ENST00000622650 282 ntBASIC1.65□□□□□ -2.15
TRAV1-1A0A0B4J248 AL356585.4-201ENST00000623078 1229 ntBASIC1.65□□□□□ -2.15
TRAV1-1A0A0B4J248 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC1.65□□□□□ -2.15
TRAV1-1A0A0B4J248 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
TRAV1-1A0A0B4J248 TPTE2P4-201ENST00000258589 1605 ntBASIC1.65□□□□□ -2.15
TRAV1-1A0A0B4J248 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
TRAV1-1A0A0B4J248 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
TRAV1-1A0A0B4J248 CENPCP1-201ENST00000533085 2578 ntBASIC1.64□□□□□ -2.15
TRAV1-1A0A0B4J248 DEFB108F-201ENST00000344638 222 ntBASIC1.64□□□□□ -2.15
TRAV1-1A0A0B4J248 RNU6-1072P-201ENST00000384703 107 ntBASIC1.64□□□□□ -2.15
TRAV1-1A0A0B4J248 RNU6-443P-201ENST00000384780 107 ntBASIC1.64□□□□□ -2.15
TRAV1-1A0A0B4J248 MIR34A-201ENST00000385130 110 ntBASIC1.64□□□□□ -2.15
TRAV1-1A0A0B4J248 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
TRAV1-1A0A0B4J248 AL024474.1-201ENST00000404655 591 ntBASIC1.64□□□□□ -2.15
TRAV1-1A0A0B4J248 AL030996.1-201ENST00000411430 235 ntBASIC1.64□□□□□ -2.15
TRAV1-1A0A0B4J248 OR4K11P-201ENST00000431829 904 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms