Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.88□□□□□ -1.47
LIMD1Q9UGP4 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.88□□□□□ -1.47
LIMD1Q9UGP4 RNU6-6P-201ENST00000606623 107 ntBASIC5.88□□□□□ -1.47
LIMD1Q9UGP4 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.88□□□□□ -1.47
LIMD1Q9UGP4 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC5.88□□□□□ -1.47
LIMD1Q9UGP4 AL365440.1-201ENST00000436135 2167 ntBASIC5.88□□□□□ -1.47
LIMD1Q9UGP4 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
LIMD1Q9UGP4 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC5.88□□□□□ -1.47
LIMD1Q9UGP4 AP004607.3-201ENST00000530354 3915 ntBASIC5.88□□□□□ -1.47
LIMD1Q9UGP4 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
LIMD1Q9UGP4 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
LIMD1Q9UGP4 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
LIMD1Q9UGP4 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.87□□□□□ -1.47
LIMD1Q9UGP4 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
LIMD1Q9UGP4 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.87□□□□□ -1.47
LIMD1Q9UGP4 Y_RNA.237-201ENST00000364439 102 ntBASIC5.87□□□□□ -1.47
LIMD1Q9UGP4 AP000275.1-201ENST00000411943 390 ntBASIC5.87□□□□□ -1.47
LIMD1Q9UGP4 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.87□□□□□ -1.47
LIMD1Q9UGP4 AC006466.1-201ENST00000438721 289 ntBASIC5.87□□□□□ -1.47
LIMD1Q9UGP4 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC5.87□□□□□ -1.47
LIMD1Q9UGP4 AL359073.1-201ENST00000448036 403 ntBASIC5.87□□□□□ -1.47
LIMD1Q9UGP4 AL139109.1-201ENST00000455491 297 ntBASIC5.87□□□□□ -1.47
LIMD1Q9UGP4 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.87□□□□□ -1.47
LIMD1Q9UGP4 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.87□□□□□ -1.47
LIMD1Q9UGP4 RNA5SP471-201ENST00000516971 106 ntBASIC5.87□□□□□ -1.47
LIMD1Q9UGP4 MIR2355-201ENST00000517199 87 ntBASIC5.87□□□□□ -1.47
LIMD1Q9UGP4 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.87□□□□□ -1.47
LIMD1Q9UGP4 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.87□□□□□ -1.47
LIMD1Q9UGP4 AC084851.1-201ENST00000529105 249 ntBASIC5.87□□□□□ -1.47
LIMD1Q9UGP4 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.87□□□□□ -1.47
LIMD1Q9UGP4 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.87□□□□□ -1.47
LIMD1Q9UGP4 AC130289.1-201ENST00000577321 73 ntBASIC5.87□□□□□ -1.47
LIMD1Q9UGP4 AC073410.2-201ENST00000603240 332 ntBASIC5.87□□□□□ -1.47
LIMD1Q9UGP4 AC000068.2-201ENST00000608816 460 ntBASIC5.87□□□□□ -1.47
LIMD1Q9UGP4 AC009318.2-201ENST00000610917 651 ntBASIC5.87□□□□□ -1.47
LIMD1Q9UGP4 AC004792.1-201ENST00000614523 137 ntBASIC5.87□□□□□ -1.47
LIMD1Q9UGP4 AC090607.5-201ENST00000615692 224 ntBASIC5.87□□□□□ -1.47
LIMD1Q9UGP4 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC5.87□□□□□ -1.47
LIMD1Q9UGP4 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC5.87□□□□□ -1.47
LIMD1Q9UGP4 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LIMD1Q9UGP4 AL450326.2-201ENST00000421913 1962 ntBASIC5.87□□□□□ -1.47
LIMD1Q9UGP4 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
LIMD1Q9UGP4 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
LIMD1Q9UGP4 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LIMD1Q9UGP4 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
LIMD1Q9UGP4 AC018809.2-201ENST00000602436 3823 ntBASIC5.86□□□□□ -1.47
LIMD1Q9UGP4 AL139811.1-201ENST00000424779 2299 ntBASIC5.86□□□□□ -1.47
LIMD1Q9UGP4 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.86□□□□□ -1.47
LIMD1Q9UGP4 AL121839.2-201ENST00000565058 6943 ntBASIC5.86□□□□□ -1.47
LIMD1Q9UGP4 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LIMD1Q9UGP4 RNU6-827P-201ENST00000365553 106 ntBASIC5.86□□□□□ -1.47
LIMD1Q9UGP4 Y_RNA.439-201ENST00000384119 94 ntBASIC5.86□□□□□ -1.47
LIMD1Q9UGP4 Y_RNA.458-201ENST00000384240 102 ntBASIC5.86□□□□□ -1.47
LIMD1Q9UGP4 LAP3P1-201ENST00000403648 294 ntBASIC5.86□□□□□ -1.47
LIMD1Q9UGP4 RNA5SP494-201ENST00000410653 129 ntBASIC5.86□□□□□ -1.47
LIMD1Q9UGP4 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.86□□□□□ -1.47
LIMD1Q9UGP4 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC5.86□□□□□ -1.47
LIMD1Q9UGP4 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.86□□□□□ -1.47
LIMD1Q9UGP4 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LIMD1Q9UGP4 AC074255.1-201ENST00000511259 501 ntBASIC5.86□□□□□ -1.47
LIMD1Q9UGP4 RN7SKP288-201ENST00000516227 268 ntBASIC5.86□□□□□ -1.47
LIMD1Q9UGP4 AC021006.3-201ENST00000530771 192 ntBASIC5.86□□□□□ -1.47
LIMD1Q9UGP4 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.86□□□□□ -1.47
LIMD1Q9UGP4 AC093023.1-201ENST00000547375 507 ntBASIC5.86□□□□□ -1.47
LIMD1Q9UGP4 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.86□□□□□ -1.47
LIMD1Q9UGP4 AL442163.3-201ENST00000554110 156 ntBASIC5.86□□□□□ -1.47
LIMD1Q9UGP4 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.86□□□□□ -1.47
LIMD1Q9UGP4 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.86□□□□□ -1.47
LIMD1Q9UGP4 MIR132-201ENST00000591554 101 ntBASIC5.86□□□□□ -1.47
LIMD1Q9UGP4 AL161798.1-201ENST00000604630 131 ntBASIC5.86□□□□□ -1.47
LIMD1Q9UGP4 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.86□□□□□ -1.47
LIMD1Q9UGP4 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.86□□□□□ -1.47
LIMD1Q9UGP4 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LIMD1Q9UGP4 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
LIMD1Q9UGP4 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LIMD1Q9UGP4 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LIMD1Q9UGP4 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LIMD1Q9UGP4 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LIMD1Q9UGP4 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
LIMD1Q9UGP4 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
LIMD1Q9UGP4 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
LIMD1Q9UGP4 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.85□□□□□ -1.47
LIMD1Q9UGP4 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.85□□□□□ -1.47
LIMD1Q9UGP4 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LIMD1Q9UGP4 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
LIMD1Q9UGP4 RNA5SP305-201ENST00000362665 119 ntBASIC5.85□□□□□ -1.47
LIMD1Q9UGP4 Y_RNA.297-201ENST00000364950 91 ntBASIC5.85□□□□□ -1.47
LIMD1Q9UGP4 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
LIMD1Q9UGP4 AL356981.1-201ENST00000454879 684 ntBASIC5.85□□□□□ -1.47
LIMD1Q9UGP4 AC087190.1-201ENST00000484462 480 ntBASIC5.85□□□□□ -1.47
LIMD1Q9UGP4 AC107032.1-201ENST00000485945 480 ntBASIC5.85□□□□□ -1.47
LIMD1Q9UGP4 RPL21P13-201ENST00000488305 481 ntBASIC5.85□□□□□ -1.47
LIMD1Q9UGP4 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.85□□□□□ -1.47
LIMD1Q9UGP4 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.85□□□□□ -1.47
LIMD1Q9UGP4 ATP5F1P5-201ENST00000526403 760 ntBASIC5.85□□□□□ -1.47
LIMD1Q9UGP4 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LIMD1Q9UGP4 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC5.85□□□□□ -1.47
LIMD1Q9UGP4 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.85□□□□□ -1.47
LIMD1Q9UGP4 AC012616.1-201ENST00000600294 197 ntBASIC5.85□□□□□ -1.47
LIMD1Q9UGP4 MIR376A1-201ENST00000616574 68 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms