Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC5.32□□□□□ -1.56
USP35Q9P2H5 AC008481.1-201ENST00000463278 396 ntBASIC5.32□□□□□ -1.56
USP35Q9P2H5 MTND1P3-201ENST00000484956 952 ntBASIC5.32□□□□□ -1.56
USP35Q9P2H5 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC5.32□□□□□ -1.56
USP35Q9P2H5 HMGN1P11-201ENST00000508668 303 ntBASIC5.32□□□□□ -1.56
USP35Q9P2H5 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC5.32□□□□□ -1.56
USP35Q9P2H5 GMPSP1-201ENST00000514075 579 ntBASIC5.32□□□□□ -1.56
USP35Q9P2H5 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC5.32□□□□□ -1.56
USP35Q9P2H5 RNU1-61P-201ENST00000516107 151 ntBASIC5.32□□□□□ -1.56
USP35Q9P2H5 RNU2-46P-201ENST00000517038 113 ntBASIC5.32□□□□□ -1.56
USP35Q9P2H5 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC5.32□□□□□ -1.56
USP35Q9P2H5 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC5.32□□□□□ -1.56
USP35Q9P2H5 AC055876.1-202ENST00000567053 138 ntBASIC5.32□□□□□ -1.56
USP35Q9P2H5 RPL23AP84-201ENST00000571193 464 ntBASIC5.32□□□□□ -1.56
USP35Q9P2H5 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC5.32□□□□□ -1.56
USP35Q9P2H5 AC005000.2-201ENST00000605468 310 ntBASIC5.32□□□□□ -1.56
USP35Q9P2H5 MIR486-1-201ENST00000612171 68 ntBASIC5.32□□□□□ -1.56
USP35Q9P2H5 AC019278.1-201ENST00000623516 479 ntBASIC5.32□□□□□ -1.56
USP35Q9P2H5 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC5.32□□□□□ -1.56
USP35Q9P2H5 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC5.32□□□□□ -1.56
USP35Q9P2H5 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC5.32□□□□□ -1.56
USP35Q9P2H5 PRO1804-201ENST00000623780 2050 ntBASIC5.32□□□□□ -1.56
USP35Q9P2H5 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
USP35Q9P2H5 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
USP35Q9P2H5 Y_RNA.318-201ENST00000365131 97 ntBASIC5.31□□□□□ -1.56
USP35Q9P2H5 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC5.31□□□□□ -1.56
USP35Q9P2H5 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
USP35Q9P2H5 Y_RNA.436-201ENST00000384097 102 ntBASIC5.31□□□□□ -1.56
USP35Q9P2H5 RPL23AP32-201ENST00000395315 459 ntBASIC5.31□□□□□ -1.56
USP35Q9P2H5 SNORA3.3-201ENST00000408712 125 ntBASIC5.31□□□□□ -1.56
USP35Q9P2H5 RNA5SP107-201ENST00000411358 122 ntBASIC5.31□□□□□ -1.56
USP35Q9P2H5 RPL21P24-201ENST00000413752 448 ntBASIC5.31□□□□□ -1.56
USP35Q9P2H5 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC5.31□□□□□ -1.56
USP35Q9P2H5 AL589872.1-201ENST00000426602 288 ntBASIC5.31□□□□□ -1.56
USP35Q9P2H5 USP12PX-201ENST00000432383 1057 ntBASIC5.31□□□□□ -1.56
USP35Q9P2H5 AC016696.1-201ENST00000446949 318 ntBASIC5.31□□□□□ -1.56
USP35Q9P2H5 AC006517.1-201ENST00000480485 328 ntBASIC5.31□□□□□ -1.56
USP35Q9P2H5 UBE2CP3-201ENST00000502715 450 ntBASIC5.31□□□□□ -1.56
USP35Q9P2H5 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC5.31□□□□□ -1.56
USP35Q9P2H5 SNORA70.16-201ENST00000516390 95 ntBASIC5.31□□□□□ -1.56
USP35Q9P2H5 RNU6-64P-201ENST00000517119 105 ntBASIC5.31□□□□□ -1.56
USP35Q9P2H5 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC5.31□□□□□ -1.56
USP35Q9P2H5 RFPL1S-203ENST00000539579 330 ntBASIC5.31□□□□□ -1.56
USP35Q9P2H5 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC5.31□□□□□ -1.56
USP35Q9P2H5 RPL21P12-201ENST00000559810 515 ntBASIC5.31□□□□□ -1.56
USP35Q9P2H5 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC5.31□□□□□ -1.56
USP35Q9P2H5 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC5.31□□□□□ -1.56
USP35Q9P2H5 AC137800.2-201ENST00000574375 120 ntBASIC5.31□□□□□ -1.56
USP35Q9P2H5 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC5.31□□□□□ -1.56
USP35Q9P2H5 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC5.31□□□□□ -1.56
USP35Q9P2H5 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC5.31□□□□□ -1.56
USP35Q9P2H5 AC138932.5-201ENST00000617759 563 ntBASIC5.31□□□□□ -1.56
USP35Q9P2H5 SNHG22-203ENST00000617833 660 ntBASIC5.31□□□□□ -1.56
USP35Q9P2H5 MIR7975-201ENST00000619350 68 ntBASIC5.31□□□□□ -1.56
USP35Q9P2H5 HSPA8P1-201ENST00000425843 1833 ntBASIC5.31□□□□□ -1.56
USP35Q9P2H5 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
USP35Q9P2H5 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
USP35Q9P2H5 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
USP35Q9P2H5 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
USP35Q9P2H5 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
USP35Q9P2H5 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC5.3□□□□□ -1.56
USP35Q9P2H5 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
USP35Q9P2H5 U8.3-201ENST00000363321 132 ntBASIC5.3□□□□□ -1.56
USP35Q9P2H5 RNU6-1284P-201ENST00000363701 100 ntBASIC5.3□□□□□ -1.56
USP35Q9P2H5 RNY4P16-201ENST00000364768 94 ntBASIC5.3□□□□□ -1.56
USP35Q9P2H5 RNY3P13-201ENST00000365542 102 ntBASIC5.3□□□□□ -1.56
USP35Q9P2H5 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
USP35Q9P2H5 RNU6-1119P-201ENST00000384349 108 ntBASIC5.3□□□□□ -1.56
USP35Q9P2H5 RNU6-348P-201ENST00000384386 107 ntBASIC5.3□□□□□ -1.56
USP35Q9P2H5 SNORA3C-201ENST00000408792 125 ntBASIC5.3□□□□□ -1.56
USP35Q9P2H5 RHEBP3-201ENST00000411920 351 ntBASIC5.3□□□□□ -1.56
USP35Q9P2H5 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC5.3□□□□□ -1.56
USP35Q9P2H5 AC008850.1-201ENST00000427546 362 ntBASIC5.3□□□□□ -1.56
USP35Q9P2H5 AC137499.1-201ENST00000427602 88 ntBASIC5.3□□□□□ -1.56
USP35Q9P2H5 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
USP35Q9P2H5 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC5.3□□□□□ -1.56
USP35Q9P2H5 AL662791.1-201ENST00000441992 928 ntBASIC5.3□□□□□ -1.56
USP35Q9P2H5 AC244505.5-201ENST00000443639 207 ntBASIC5.3□□□□□ -1.56
USP35Q9P2H5 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC5.3□□□□□ -1.56
USP35Q9P2H5 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC5.3□□□□□ -1.56
USP35Q9P2H5 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
USP35Q9P2H5 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC5.3□□□□□ -1.56
USP35Q9P2H5 NDUFB4P2-201ENST00000509515 391 ntBASIC5.3□□□□□ -1.56
USP35Q9P2H5 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.3□□□□□ -1.56
USP35Q9P2H5 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.3□□□□□ -1.56
USP35Q9P2H5 AC007599.1-201ENST00000568688 1174 ntBASIC5.3□□□□□ -1.56
USP35Q9P2H5 AC099489.2-201ENST00000574976 260 ntBASIC5.3□□□□□ -1.56
USP35Q9P2H5 MIR4644-201ENST00000579929 84 ntBASIC5.3□□□□□ -1.56
USP35Q9P2H5 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
USP35Q9P2H5 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC5.3□□□□□ -1.56
USP35Q9P2H5 AF038458.1-201ENST00000588406 262 ntBASIC5.3□□□□□ -1.56
USP35Q9P2H5 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC5.3□□□□□ -1.56
USP35Q9P2H5 AC012531.5-201ENST00000611375 151 ntBASIC5.3□□□□□ -1.56
USP35Q9P2H5 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC5.3□□□□□ -1.56
USP35Q9P2H5 AL110115.1-201ENST00000614396 364 ntBASIC5.3□□□□□ -1.56
USP35Q9P2H5 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
USP35Q9P2H5 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
USP35Q9P2H5 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC5.3□□□□□ -1.56
USP35Q9P2H5 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC5.3□□□□□ -1.56
USP35Q9P2H5 AC090740.1-201ENST00000623193 2262 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms