Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.18□□□□□ -1.74
COL20A1Q9P218 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.18□□□□□ -1.74
COL20A1Q9P218 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
COL20A1Q9P218 AL117351.2-201ENST00000513571 157 ntBASIC4.18□□□□□ -1.74
COL20A1Q9P218 Vault.1-201ENST00000516474 102 ntBASIC4.18□□□□□ -1.74
COL20A1Q9P218 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC4.18□□□□□ -1.74
COL20A1Q9P218 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.18□□□□□ -1.74
COL20A1Q9P218 SUMO2P20-201ENST00000520803 283 ntBASIC4.18□□□□□ -1.74
COL20A1Q9P218 DEFB108D-201ENST00000527787 222 ntBASIC4.18□□□□□ -1.74
COL20A1Q9P218 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.18□□□□□ -1.74
COL20A1Q9P218 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
COL20A1Q9P218 AC007458.1-201ENST00000542812 373 ntBASIC4.18□□□□□ -1.74
COL20A1Q9P218 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC4.18□□□□□ -1.74
COL20A1Q9P218 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.18□□□□□ -1.74
COL20A1Q9P218 AC027807.1-201ENST00000559921 996 ntBASIC4.18□□□□□ -1.74
COL20A1Q9P218 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.18□□□□□ -1.74
COL20A1Q9P218 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.18□□□□□ -1.74
COL20A1Q9P218 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.18□□□□□ -1.74
COL20A1Q9P218 AC015967.1-201ENST00000619893 476 ntBASIC4.18□□□□□ -1.74
COL20A1Q9P218 RMST_9.1-201ENST00000619945 193 ntBASIC4.18□□□□□ -1.74
COL20A1Q9P218 AC124864.2-201ENST00000624736 186 ntBASIC4.18□□□□□ -1.74
COL20A1Q9P218 OR5H6-203ENST00000642105 978 ntBASIC4.18□□□□□ -1.74
COL20A1Q9P218 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.18□□□□□ -1.74
COL20A1Q9P218 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
COL20A1Q9P218 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.18□□□□□ -1.74
COL20A1Q9P218 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.18□□□□□ -1.74
COL20A1Q9P218 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.17□□□□□ -1.74
COL20A1Q9P218 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.17□□□□□ -1.74
COL20A1Q9P218 AC138915.3-201ENST00000562908 1389 ntBASIC4.17□□□□□ -1.74
COL20A1Q9P218 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.17□□□□□ -1.74
COL20A1Q9P218 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
COL20A1Q9P218 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
COL20A1Q9P218 RNU4-1-201ENST00000363925 141 ntBASIC4.17□□□□□ -1.74
COL20A1Q9P218 RNU6-1074P-201ENST00000383995 104 ntBASIC4.17□□□□□ -1.74
COL20A1Q9P218 MIR7-3-201ENST00000384898 110 ntBASIC4.17□□□□□ -1.74
COL20A1Q9P218 AL109755.1-201ENST00000401791 649 ntBASIC4.17□□□□□ -1.74
COL20A1Q9P218 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.17□□□□□ -1.74
COL20A1Q9P218 EIF1P1-201ENST00000421436 341 ntBASIC4.17□□□□□ -1.74
COL20A1Q9P218 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC4.17□□□□□ -1.74
COL20A1Q9P218 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
COL20A1Q9P218 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.17□□□□□ -1.74
COL20A1Q9P218 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC4.17□□□□□ -1.74
COL20A1Q9P218 DPPA2P1-201ENST00000428060 556 ntBASIC4.17□□□□□ -1.74
COL20A1Q9P218 CYCSP4-201ENST00000429682 331 ntBASIC4.17□□□□□ -1.74
COL20A1Q9P218 AC073464.1-201ENST00000429823 534 ntBASIC4.17□□□□□ -1.74
COL20A1Q9P218 AL353748.1-201ENST00000440753 474 ntBASIC4.17□□□□□ -1.74
COL20A1Q9P218 HMGN2P21-201ENST00000447764 270 ntBASIC4.17□□□□□ -1.74
COL20A1Q9P218 PRDX3P3-201ENST00000447765 522 ntBASIC4.17□□□□□ -1.74
COL20A1Q9P218 AC006480.1-201ENST00000449887 378 ntBASIC4.17□□□□□ -1.74
COL20A1Q9P218 AC093392.2-201ENST00000450682 337 ntBASIC4.17□□□□□ -1.74
COL20A1Q9P218 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.17□□□□□ -1.74
COL20A1Q9P218 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.17□□□□□ -1.74
COL20A1Q9P218 RPL7P49-201ENST00000471402 708 ntBASIC4.17□□□□□ -1.74
COL20A1Q9P218 AC004924.1-201ENST00000480160 781 ntBASIC4.17□□□□□ -1.74
COL20A1Q9P218 AC007182.2-201ENST00000489251 402 ntBASIC4.17□□□□□ -1.74
COL20A1Q9P218 AC023194.1-201ENST00000493084 308 ntBASIC4.17□□□□□ -1.74
COL20A1Q9P218 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.17□□□□□ -1.74
COL20A1Q9P218 VWA8P1-201ENST00000510889 176 ntBASIC4.17□□□□□ -1.74
COL20A1Q9P218 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.17□□□□□ -1.74
COL20A1Q9P218 RNU6-314P-201ENST00000516574 104 ntBASIC4.17□□□□□ -1.74
COL20A1Q9P218 RNA5SP337-201ENST00000517007 109 ntBASIC4.17□□□□□ -1.74
COL20A1Q9P218 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC4.17□□□□□ -1.74
COL20A1Q9P218 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
COL20A1Q9P218 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC4.17□□□□□ -1.74
COL20A1Q9P218 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.17□□□□□ -1.74
COL20A1Q9P218 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC4.17□□□□□ -1.74
COL20A1Q9P218 AC087481.2-201ENST00000565492 330 ntBASIC4.17□□□□□ -1.74
COL20A1Q9P218 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
COL20A1Q9P218 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.17□□□□□ -1.74
COL20A1Q9P218 AP000553.6-201ENST00000641242 118 ntBASIC4.17□□□□□ -1.74
COL20A1Q9P218 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
COL20A1Q9P218 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.16□□□□□ -1.74
COL20A1Q9P218 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.16□□□□□ -1.74
COL20A1Q9P218 LINC02471-203ENST00000641941 4752 ntBASIC4.16□□□□□ -1.74
COL20A1Q9P218 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
COL20A1Q9P218 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.16□□□□□ -1.74
COL20A1Q9P218 AC012020.1-201ENST00000624541 1728 ntBASIC4.16□□□□□ -1.74
COL20A1Q9P218 OR1S2-201ENST00000302592 978 ntBASIC4.16□□□□□ -1.74
COL20A1Q9P218 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
COL20A1Q9P218 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
COL20A1Q9P218 MIR708-201ENST00000390708 88 ntBASIC4.16□□□□□ -1.74
COL20A1Q9P218 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
COL20A1Q9P218 RNA5SP39-201ENST00000411245 120 ntBASIC4.16□□□□□ -1.74
COL20A1Q9P218 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.16□□□□□ -1.74
COL20A1Q9P218 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.16□□□□□ -1.74
COL20A1Q9P218 AP000907.1-201ENST00000428428 510 ntBASIC4.16□□□□□ -1.74
COL20A1Q9P218 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.16□□□□□ -1.74
COL20A1Q9P218 AL159987.2-201ENST00000432754 307 ntBASIC4.16□□□□□ -1.74
COL20A1Q9P218 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.16□□□□□ -1.74
COL20A1Q9P218 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC4.16□□□□□ -1.74
COL20A1Q9P218 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.16□□□□□ -1.74
COL20A1Q9P218 USP9YP7-201ENST00000436723 430 ntBASIC4.16□□□□□ -1.74
COL20A1Q9P218 RPL21P23-201ENST00000446654 460 ntBASIC4.16□□□□□ -1.74
COL20A1Q9P218 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.16□□□□□ -1.74
COL20A1Q9P218 USP9YP32-201ENST00000452432 430 ntBASIC4.16□□□□□ -1.74
COL20A1Q9P218 AL645939.1-201ENST00000453429 797 ntBASIC4.16□□□□□ -1.74
COL20A1Q9P218 AL121877.1-201ENST00000453704 622 ntBASIC4.16□□□□□ -1.74
COL20A1Q9P218 AC133473.1-201ENST00000455173 299 ntBASIC4.16□□□□□ -1.74
COL20A1Q9P218 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.16□□□□□ -1.74
COL20A1Q9P218 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms