Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 RNU6-273P-201ENST00000516937 96 ntBASIC4.31□□□□□ -1.72
KCMF1Q9P0J7 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.31□□□□□ -1.72
KCMF1Q9P0J7 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.31□□□□□ -1.72
KCMF1Q9P0J7 AL137161.1-201ENST00000532231 390 ntBASIC4.31□□□□□ -1.72
KCMF1Q9P0J7 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.31□□□□□ -1.72
KCMF1Q9P0J7 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.31□□□□□ -1.72
KCMF1Q9P0J7 AC068790.4-201ENST00000602474 263 ntBASIC4.31□□□□□ -1.72
KCMF1Q9P0J7 AL022345.1-201ENST00000607292 135 ntBASIC4.31□□□□□ -1.72
KCMF1Q9P0J7 AL450472.3-201ENST00000615578 367 ntBASIC4.31□□□□□ -1.72
KCMF1Q9P0J7 AC099669.2-201ENST00000616549 437 ntBASIC4.31□□□□□ -1.72
KCMF1Q9P0J7 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.31□□□□□ -1.72
KCMF1Q9P0J7 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
KCMF1Q9P0J7 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
KCMF1Q9P0J7 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.31□□□□□ -1.72
KCMF1Q9P0J7 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
KCMF1Q9P0J7 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
KCMF1Q9P0J7 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
KCMF1Q9P0J7 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
KCMF1Q9P0J7 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.3□□□□□ -1.72
KCMF1Q9P0J7 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
KCMF1Q9P0J7 RNA5SP151-201ENST00000365632 117 ntBASIC4.3□□□□□ -1.72
KCMF1Q9P0J7 SMIM11P1-201ENST00000369586 178 ntBASIC4.3□□□□□ -1.72
KCMF1Q9P0J7 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
KCMF1Q9P0J7 RNU6-946P-201ENST00000383878 107 ntBASIC4.3□□□□□ -1.72
KCMF1Q9P0J7 Y_RNA.387-201ENST00000383918 102 ntBASIC4.3□□□□□ -1.72
KCMF1Q9P0J7 Y_RNA.414-201ENST00000384011 101 ntBASIC4.3□□□□□ -1.72
KCMF1Q9P0J7 RNU6-701P-201ENST00000384059 107 ntBASIC4.3□□□□□ -1.72
KCMF1Q9P0J7 RNU6-356P-201ENST00000384140 107 ntBASIC4.3□□□□□ -1.72
KCMF1Q9P0J7 Y_RNA.530-201ENST00000384587 101 ntBASIC4.3□□□□□ -1.72
KCMF1Q9P0J7 AL592114.1-201ENST00000403842 483 ntBASIC4.3□□□□□ -1.72
KCMF1Q9P0J7 RPL30P2-201ENST00000414021 291 ntBASIC4.3□□□□□ -1.72
KCMF1Q9P0J7 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.3□□□□□ -1.72
KCMF1Q9P0J7 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.3□□□□□ -1.72
KCMF1Q9P0J7 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.3□□□□□ -1.72
KCMF1Q9P0J7 RPL21P91-201ENST00000429231 479 ntBASIC4.3□□□□□ -1.72
KCMF1Q9P0J7 KCTD9P3-201ENST00000434597 1169 ntBASIC4.3□□□□□ -1.72
KCMF1Q9P0J7 AC009220.1-201ENST00000451614 275 ntBASIC4.3□□□□□ -1.72
KCMF1Q9P0J7 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.3□□□□□ -1.72
KCMF1Q9P0J7 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.3□□□□□ -1.72
KCMF1Q9P0J7 RPL21P103-201ENST00000479921 488 ntBASIC4.3□□□□□ -1.72
KCMF1Q9P0J7 AC012158.1-204ENST00000483430 465 ntBASIC4.3□□□□□ -1.72
KCMF1Q9P0J7 VN1R105P-201ENST00000486595 910 ntBASIC4.3□□□□□ -1.72
KCMF1Q9P0J7 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.3□□□□□ -1.72
KCMF1Q9P0J7 RBBP4P6-201ENST00000508098 202 ntBASIC4.3□□□□□ -1.72
KCMF1Q9P0J7 AP001804.3-201ENST00000525146 880 ntBASIC4.3□□□□□ -1.72
KCMF1Q9P0J7 AP000827.1-201ENST00000527814 258 ntBASIC4.3□□□□□ -1.72
KCMF1Q9P0J7 AP001781.1-201ENST00000530977 207 ntBASIC4.3□□□□□ -1.72
KCMF1Q9P0J7 AP003072.1-201ENST00000531740 145 ntBASIC4.3□□□□□ -1.72
KCMF1Q9P0J7 AP000763.2-201ENST00000540641 163 ntBASIC4.3□□□□□ -1.72
KCMF1Q9P0J7 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC4.3□□□□□ -1.72
KCMF1Q9P0J7 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.3□□□□□ -1.72
KCMF1Q9P0J7 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.3□□□□□ -1.72
KCMF1Q9P0J7 LLPHP1-201ENST00000603571 367 ntBASIC4.3□□□□□ -1.72
KCMF1Q9P0J7 uc_338.15-201ENST00000615470 191 ntBASIC4.3□□□□□ -1.72
KCMF1Q9P0J7 AL158196.1-201ENST00000616786 434 ntBASIC4.3□□□□□ -1.72
KCMF1Q9P0J7 MIR7641-1-201ENST00000627518 61 ntBASIC4.3□□□□□ -1.72
KCMF1Q9P0J7 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.3□□□□□ -1.72
KCMF1Q9P0J7 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.3□□□□□ -1.72
KCMF1Q9P0J7 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
KCMF1Q9P0J7 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
KCMF1Q9P0J7 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
KCMF1Q9P0J7 AP001350.1-201ENST00000601906 1524 ntBASIC4.3□□□□□ -1.72
KCMF1Q9P0J7 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
KCMF1Q9P0J7 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.3□□□□□ -1.72
KCMF1Q9P0J7 CPHL1P-201ENST00000461341 3407 ntBASIC4.3□□□□□ -1.72
KCMF1Q9P0J7 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
KCMF1Q9P0J7 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
KCMF1Q9P0J7 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
KCMF1Q9P0J7 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
KCMF1Q9P0J7 TPTE2P4-201ENST00000258589 1605 ntBASIC4.29□□□□□ -1.72
KCMF1Q9P0J7 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
KCMF1Q9P0J7 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
KCMF1Q9P0J7 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
KCMF1Q9P0J7 Y_RNA.138-201ENST00000363462 102 ntBASIC4.29□□□□□ -1.72
KCMF1Q9P0J7 RNU1-32P-201ENST00000363937 159 ntBASIC4.29□□□□□ -1.72
KCMF1Q9P0J7 U3.12-201ENST00000364498 214 ntBASIC4.29□□□□□ -1.72
KCMF1Q9P0J7 SNORA23-201ENST00000365128 182 ntBASIC4.29□□□□□ -1.72
KCMF1Q9P0J7 MIR141-201ENST00000384975 95 ntBASIC4.29□□□□□ -1.72
KCMF1Q9P0J7 RNU6-837P-201ENST00000391056 108 ntBASIC4.29□□□□□ -1.72
KCMF1Q9P0J7 RNU6-550P-201ENST00000391057 101 ntBASIC4.29□□□□□ -1.72
KCMF1Q9P0J7 RNU4-46P-201ENST00000410818 138 ntBASIC4.29□□□□□ -1.72
KCMF1Q9P0J7 RPS7P15-201ENST00000415804 584 ntBASIC4.29□□□□□ -1.72
KCMF1Q9P0J7 AC236972.2-201ENST00000434979 310 ntBASIC4.29□□□□□ -1.72
KCMF1Q9P0J7 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.29□□□□□ -1.72
KCMF1Q9P0J7 CYCSP43-201ENST00000438233 310 ntBASIC4.29□□□□□ -1.72
KCMF1Q9P0J7 RPL23AP93-201ENST00000440847 484 ntBASIC4.29□□□□□ -1.72
KCMF1Q9P0J7 AC020550.1-201ENST00000447385 163 ntBASIC4.29□□□□□ -1.72
KCMF1Q9P0J7 AL162591.2-201ENST00000449634 317 ntBASIC4.29□□□□□ -1.72
KCMF1Q9P0J7 RPS11P1-201ENST00000451072 473 ntBASIC4.29□□□□□ -1.72
KCMF1Q9P0J7 FABP5P13-201ENST00000452144 328 ntBASIC4.29□□□□□ -1.72
KCMF1Q9P0J7 snoU13.1-201ENST00000459157 104 ntBASIC4.29□□□□□ -1.72
KCMF1Q9P0J7 RPL21P8-201ENST00000465083 535 ntBASIC4.29□□□□□ -1.72
KCMF1Q9P0J7 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.29□□□□□ -1.72
KCMF1Q9P0J7 Y_RNA.654-201ENST00000497848 106 ntBASIC4.29□□□□□ -1.72
KCMF1Q9P0J7 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.29□□□□□ -1.72
KCMF1Q9P0J7 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.29□□□□□ -1.72
KCMF1Q9P0J7 AP005597.4-201ENST00000526762 229 ntBASIC4.29□□□□□ -1.72
KCMF1Q9P0J7 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.29□□□□□ -1.72
KCMF1Q9P0J7 RANP3-201ENST00000530970 276 ntBASIC4.29□□□□□ -1.72
KCMF1Q9P0J7 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms