Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2.47□□□□□ -2.01
TREX1Q9NSU2 RPS3P1-201ENST00000456781 192 ntBASIC2.47□□□□□ -2.01
TREX1Q9NSU2 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.47□□□□□ -2.01
TREX1Q9NSU2 MTND5P4-201ENST00000514978 288 ntBASIC2.47□□□□□ -2.01
TREX1Q9NSU2 SNORA70.16-201ENST00000516390 95 ntBASIC2.47□□□□□ -2.01
TREX1Q9NSU2 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.47□□□□□ -2.01
TREX1Q9NSU2 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.47□□□□□ -2.01
TREX1Q9NSU2 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.47□□□□□ -2.01
TREX1Q9NSU2 CR383656.7-201ENST00000548164 174 ntBASIC2.47□□□□□ -2.01
TREX1Q9NSU2 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.47□□□□□ -2.01
TREX1Q9NSU2 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
TREX1Q9NSU2 HMGB1P6-201ENST00000569046 646 ntBASIC2.47□□□□□ -2.01
TREX1Q9NSU2 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC2.47□□□□□ -2.01
TREX1Q9NSU2 RPL23AP92-201ENST00000603609 255 ntBASIC2.47□□□□□ -2.01
TREX1Q9NSU2 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC2.47□□□□□ -2.01
TREX1Q9NSU2 AP001521.1-201ENST00000609150 300 ntBASIC2.47□□□□□ -2.01
TREX1Q9NSU2 AC025588.4-201ENST00000615802 908 ntBASIC2.47□□□□□ -2.01
TREX1Q9NSU2 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.47□□□□□ -2.01
TREX1Q9NSU2 U6.101-201ENST00000637707 76 ntBASIC2.47□□□□□ -2.01
TREX1Q9NSU2 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
TREX1Q9NSU2 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.46□□□□□ -2.02
TREX1Q9NSU2 OR4G11P-202ENST00000642116 1414 ntBASIC2.46□□□□□ -2.02
TREX1Q9NSU2 RNU1-138P-201ENST00000384093 164 ntBASIC2.46□□□□□ -2.02
TREX1Q9NSU2 SNRPEP2-201ENST00000397592 279 ntBASIC2.46□□□□□ -2.02
TREX1Q9NSU2 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
TREX1Q9NSU2 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC2.46□□□□□ -2.02
TREX1Q9NSU2 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.46□□□□□ -2.02
TREX1Q9NSU2 AC093155.1-201ENST00000440164 826 ntBASIC2.46□□□□□ -2.02
TREX1Q9NSU2 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.46□□□□□ -2.02
TREX1Q9NSU2 AC244505.3-201ENST00000454598 187 ntBASIC2.46□□□□□ -2.02
TREX1Q9NSU2 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.46□□□□□ -2.02
TREX1Q9NSU2 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.46□□□□□ -2.02
TREX1Q9NSU2 COX7A2P2-201ENST00000505291 250 ntBASIC2.46□□□□□ -2.02
TREX1Q9NSU2 CDC42P4-201ENST00000510507 563 ntBASIC2.46□□□□□ -2.02
TREX1Q9NSU2 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.46□□□□□ -2.02
TREX1Q9NSU2 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.46□□□□□ -2.02
TREX1Q9NSU2 AC025881.1-201ENST00000518851 512 ntBASIC2.46□□□□□ -2.02
TREX1Q9NSU2 AC027309.2-201ENST00000520566 192 ntBASIC2.46□□□□□ -2.02
TREX1Q9NSU2 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.46□□□□□ -2.02
TREX1Q9NSU2 AP001189.2-201ENST00000527320 189 ntBASIC2.46□□□□□ -2.02
TREX1Q9NSU2 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.46□□□□□ -2.02
TREX1Q9NSU2 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.46□□□□□ -2.02
TREX1Q9NSU2 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.46□□□□□ -2.02
TREX1Q9NSU2 VN1R87P-201ENST00000596706 487 ntBASIC2.46□□□□□ -2.02
TREX1Q9NSU2 AL035411.2-201ENST00000604022 421 ntBASIC2.46□□□□□ -2.02
TREX1Q9NSU2 AL445435.1-201ENST00000604232 665 ntBASIC2.46□□□□□ -2.02
TREX1Q9NSU2 AC034102.8-201ENST00000615146 484 ntBASIC2.46□□□□□ -2.02
TREX1Q9NSU2 AC027309.3-201ENST00000623419 351 ntBASIC2.46□□□□□ -2.02
TREX1Q9NSU2 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.46□□□□□ -2.02
TREX1Q9NSU2 AC087821.2-201ENST00000637086 450 ntBASIC2.46□□□□□ -2.02
TREX1Q9NSU2 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.46□□□□□ -2.02
TREX1Q9NSU2 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
TREX1Q9NSU2 Z99496.1-201ENST00000469424 1477 ntBASIC2.45□□□□□ -2.02
TREX1Q9NSU2 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.45□□□□□ -2.02
TREX1Q9NSU2 AC016717.2-201ENST00000609089 5141 ntBASIC2.45□□□□□ -2.02
TREX1Q9NSU2 FRG1BP-201ENST00000278882 761 ntBASIC2.45□□□□□ -2.02
TREX1Q9NSU2 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
TREX1Q9NSU2 SUGT1P1-201ENST00000379514 476 ntBASIC2.45□□□□□ -2.02
TREX1Q9NSU2 SNORA41-201ENST00000384675 132 ntBASIC2.45□□□□□ -2.02
TREX1Q9NSU2 RNU6-882P-201ENST00000391025 103 ntBASIC2.45□□□□□ -2.02
TREX1Q9NSU2 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.45□□□□□ -2.02
TREX1Q9NSU2 RPL7P27-201ENST00000403775 720 ntBASIC2.45□□□□□ -2.02
TREX1Q9NSU2 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.45□□□□□ -2.02
TREX1Q9NSU2 DPRXP1-201ENST00000426312 460 ntBASIC2.45□□□□□ -2.02
TREX1Q9NSU2 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.45□□□□□ -2.02
TREX1Q9NSU2 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.45□□□□□ -2.02
TREX1Q9NSU2 AC098826.1-201ENST00000433943 471 ntBASIC2.45□□□□□ -2.02
TREX1Q9NSU2 SEPT7P5-201ENST00000434048 306 ntBASIC2.45□□□□□ -2.02
TREX1Q9NSU2 ARPC3P1-201ENST00000437218 533 ntBASIC2.45□□□□□ -2.02
TREX1Q9NSU2 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.45□□□□□ -2.02
TREX1Q9NSU2 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC2.45□□□□□ -2.02
TREX1Q9NSU2 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.45□□□□□ -2.02
TREX1Q9NSU2 RPL36AP51-201ENST00000487216 318 ntBASIC2.45□□□□□ -2.02
TREX1Q9NSU2 KLRA1P-201ENST00000503499 986 ntBASIC2.45□□□□□ -2.02
TREX1Q9NSU2 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.45□□□□□ -2.02
TREX1Q9NSU2 RPL37P25-201ENST00000507308 276 ntBASIC2.45□□□□□ -2.02
TREX1Q9NSU2 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.45□□□□□ -2.02
TREX1Q9NSU2 AP003355.1-201ENST00000518956 587 ntBASIC2.45□□□□□ -2.02
TREX1Q9NSU2 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.45□□□□□ -2.02
TREX1Q9NSU2 OR5AK1P-201ENST00000524837 922 ntBASIC2.45□□□□□ -2.02
TREX1Q9NSU2 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
TREX1Q9NSU2 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.45□□□□□ -2.02
TREX1Q9NSU2 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
TREX1Q9NSU2 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC2.45□□□□□ -2.02
TREX1Q9NSU2 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.45□□□□□ -2.02
TREX1Q9NSU2 AC011471.1-201ENST00000585766 187 ntBASIC2.45□□□□□ -2.02
TREX1Q9NSU2 AP000787.2-201ENST00000604432 568 ntBASIC2.45□□□□□ -2.02
TREX1Q9NSU2 AL049779.4-201ENST00000604500 156 ntBASIC2.45□□□□□ -2.02
TREX1Q9NSU2 AC084824.5-201ENST00000612009 413 ntBASIC2.45□□□□□ -2.02
TREX1Q9NSU2 AC004852.3-201ENST00000614131 326 ntBASIC2.45□□□□□ -2.02
TREX1Q9NSU2 U4.3-201ENST00000621047 82 ntBASIC2.45□□□□□ -2.02
TREX1Q9NSU2 AC068880.4-201ENST00000623082 495 ntBASIC2.45□□□□□ -2.02
TREX1Q9NSU2 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.45□□□□□ -2.02
TREX1Q9NSU2 AC006927.2-201ENST00000639256 389 ntBASIC2.45□□□□□ -2.02
TREX1Q9NSU2 TPTE2P4-201ENST00000258589 1605 ntBASIC2.45□□□□□ -2.02
TREX1Q9NSU2 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
TREX1Q9NSU2 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
TREX1Q9NSU2 AC069528.2-201ENST00000624849 1991 ntBASIC2.45□□□□□ -2.02
TREX1Q9NSU2 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
TREX1Q9NSU2 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms