Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AL391813.2-201ENST00000609113 322 ntBASIC3.58□□□□□ -1.84
BRF2Q9HAW0 AC009570.1-201ENST00000609599 745 ntBASIC3.58□□□□□ -1.84
BRF2Q9HAW0 AL136295.6-201ENST00000610486 658 ntBASIC3.58□□□□□ -1.84
BRF2Q9HAW0 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.58□□□□□ -1.84
BRF2Q9HAW0 AC011939.3-201ENST00000613686 466 ntBASIC3.58□□□□□ -1.84
BRF2Q9HAW0 AC010133.1-201ENST00000615809 842 ntBASIC3.58□□□□□ -1.84
BRF2Q9HAW0 uc_338.12-201ENST00000616344 181 ntBASIC3.58□□□□□ -1.84
BRF2Q9HAW0 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
BRF2Q9HAW0 SNHG22-203ENST00000617833 660 ntBASIC3.58□□□□□ -1.84
BRF2Q9HAW0 FP236240.3-201ENST00000623061 327 ntBASIC3.58□□□□□ -1.84
BRF2Q9HAW0 AC091953.2-201ENST00000623979 160 ntBASIC3.58□□□□□ -1.84
BRF2Q9HAW0 AC092104.1-201ENST00000497346 1441 ntBASIC3.58□□□□□ -1.84
BRF2Q9HAW0 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
BRF2Q9HAW0 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
BRF2Q9HAW0 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
BRF2Q9HAW0 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
BRF2Q9HAW0 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
BRF2Q9HAW0 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.57□□□□□ -1.84
BRF2Q9HAW0 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
BRF2Q9HAW0 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
BRF2Q9HAW0 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
BRF2Q9HAW0 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
BRF2Q9HAW0 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
BRF2Q9HAW0 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
BRF2Q9HAW0 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.57□□□□□ -1.84
BRF2Q9HAW0 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
BRF2Q9HAW0 RNU6-1284P-201ENST00000363701 100 ntBASIC3.57□□□□□ -1.84
BRF2Q9HAW0 Y_RNA.318-201ENST00000365131 97 ntBASIC3.57□□□□□ -1.84
BRF2Q9HAW0 Y_RNA.359-201ENST00000365498 102 ntBASIC3.57□□□□□ -1.84
BRF2Q9HAW0 RNA5SP283-201ENST00000365604 119 ntBASIC3.57□□□□□ -1.84
BRF2Q9HAW0 SNORA1.3-201ENST00000384676 136 ntBASIC3.57□□□□□ -1.84
BRF2Q9HAW0 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
BRF2Q9HAW0 AC007256.1-201ENST00000392253 2765 ntBASIC3.57□□□□□ -1.84
BRF2Q9HAW0 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
BRF2Q9HAW0 RNA5SP107-201ENST00000411358 122 ntBASIC3.57□□□□□ -1.84
BRF2Q9HAW0 AC007390.1-201ENST00000415722 356 ntBASIC3.57□□□□□ -1.84
BRF2Q9HAW0 HMGB3P20-201ENST00000417997 600 ntBASIC3.57□□□□□ -1.84
BRF2Q9HAW0 BX842559.1-201ENST00000419615 532 ntBASIC3.57□□□□□ -1.84
BRF2Q9HAW0 UBE2D3P2-201ENST00000424409 445 ntBASIC3.57□□□□□ -1.84
BRF2Q9HAW0 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.57□□□□□ -1.84
BRF2Q9HAW0 HSPA8P1-201ENST00000425843 1833 ntBASIC3.57□□□□□ -1.84
BRF2Q9HAW0 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.57□□□□□ -1.84
BRF2Q9HAW0 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.57□□□□□ -1.84
BRF2Q9HAW0 AL353706.1-201ENST00000436728 494 ntBASIC3.57□□□□□ -1.84
BRF2Q9HAW0 ARPC3P1-201ENST00000437218 533 ntBASIC3.57□□□□□ -1.84
BRF2Q9HAW0 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.57□□□□□ -1.84
BRF2Q9HAW0 AC093156.1-201ENST00000440382 670 ntBASIC3.57□□□□□ -1.84
BRF2Q9HAW0 AC005094.1-201ENST00000440420 368 ntBASIC3.57□□□□□ -1.84
BRF2Q9HAW0 AL022238.1-201ENST00000442557 355 ntBASIC3.57□□□□□ -1.84
BRF2Q9HAW0 MTND6P13-201ENST00000443510 523 ntBASIC3.57□□□□□ -1.84
BRF2Q9HAW0 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.57□□□□□ -1.84
BRF2Q9HAW0 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.57□□□□□ -1.84
BRF2Q9HAW0 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.57□□□□□ -1.84
BRF2Q9HAW0 RPS20P20-201ENST00000460498 340 ntBASIC3.57□□□□□ -1.84
BRF2Q9HAW0 RPS27AP1-201ENST00000475545 471 ntBASIC3.57□□□□□ -1.84
BRF2Q9HAW0 RPL30P5-201ENST00000494923 336 ntBASIC3.57□□□□□ -1.84
BRF2Q9HAW0 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
BRF2Q9HAW0 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.57□□□□□ -1.84
BRF2Q9HAW0 MTND3P5-201ENST00000512798 333 ntBASIC3.57□□□□□ -1.84
BRF2Q9HAW0 AC022447.1-201ENST00000515358 464 ntBASIC3.57□□□□□ -1.84
BRF2Q9HAW0 SNORA18.6-201ENST00000516792 115 ntBASIC3.57□□□□□ -1.84
BRF2Q9HAW0 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.57□□□□□ -1.84
BRF2Q9HAW0 AC135279.1-201ENST00000543493 504 ntBASIC3.57□□□□□ -1.84
BRF2Q9HAW0 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.57□□□□□ -1.84
BRF2Q9HAW0 AC093012.1-202ENST00000549403 582 ntBASIC3.57□□□□□ -1.84
BRF2Q9HAW0 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.57□□□□□ -1.84
BRF2Q9HAW0 PARP1P2-201ENST00000556806 195 ntBASIC3.57□□□□□ -1.84
BRF2Q9HAW0 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.57□□□□□ -1.84
BRF2Q9HAW0 MIR4286-201ENST00000580651 93 ntBASIC3.57□□□□□ -1.84
BRF2Q9HAW0 AC053481.4-201ENST00000583164 216 ntBASIC3.57□□□□□ -1.84
BRF2Q9HAW0 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.57□□□□□ -1.84
BRF2Q9HAW0 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.57□□□□□ -1.84
BRF2Q9HAW0 AC006566.1-201ENST00000608943 513 ntBASIC3.57□□□□□ -1.84
BRF2Q9HAW0 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.57□□□□□ -1.84
BRF2Q9HAW0 AL391261.4-201ENST00000616012 481 ntBASIC3.57□□□□□ -1.84
BRF2Q9HAW0 MIR6076-201ENST00000617521 113 ntBASIC3.57□□□□□ -1.84
BRF2Q9HAW0 ZYXP1-201ENST00000617638 118 ntBASIC3.57□□□□□ -1.84
BRF2Q9HAW0 AC006338.1-201ENST00000618453 749 ntBASIC3.57□□□□□ -1.84
BRF2Q9HAW0 AC092656.1-203ENST00000624134 423 ntBASIC3.57□□□□□ -1.84
BRF2Q9HAW0 U6.98-201ENST00000637157 84 ntBASIC3.57□□□□□ -1.84
BRF2Q9HAW0 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
BRF2Q9HAW0 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
BRF2Q9HAW0 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
BRF2Q9HAW0 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.56□□□□□ -1.84
BRF2Q9HAW0 PTMAP5-201ENST00000393073 333 ntBASIC3.56□□□□□ -1.84
BRF2Q9HAW0 RPS4XP3-201ENST00000398541 413 ntBASIC3.56□□□□□ -1.84
BRF2Q9HAW0 RNU6-628P-201ENST00000410675 107 ntBASIC3.56□□□□□ -1.84
BRF2Q9HAW0 AC019097.1-201ENST00000424783 735 ntBASIC3.56□□□□□ -1.84
BRF2Q9HAW0 AC006989.1-201ENST00000427212 131 ntBASIC3.56□□□□□ -1.84
BRF2Q9HAW0 AL591419.1-201ENST00000427423 339 ntBASIC3.56□□□□□ -1.84
BRF2Q9HAW0 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.56□□□□□ -1.84
BRF2Q9HAW0 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.56□□□□□ -1.84
BRF2Q9HAW0 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.56□□□□□ -1.84
BRF2Q9HAW0 MTND1P12-201ENST00000455231 147 ntBASIC3.56□□□□□ -1.84
BRF2Q9HAW0 MTCO2P18-201ENST00000457151 658 ntBASIC3.56□□□□□ -1.84
BRF2Q9HAW0 RPL31P60-201ENST00000478450 367 ntBASIC3.56□□□□□ -1.84
BRF2Q9HAW0 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.56□□□□□ -1.84
BRF2Q9HAW0 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.56□□□□□ -1.84
BRF2Q9HAW0 RNU6-352P-201ENST00000516908 107 ntBASIC3.56□□□□□ -1.84
BRF2Q9HAW0 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms