Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 RN7SKP142-201ENST00000411236 328 ntBASIC3.64□□□□□ -1.83
UPF2Q9HAU5 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.64□□□□□ -1.83
UPF2Q9HAU5 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.64□□□□□ -1.83
UPF2Q9HAU5 AL512649.1-201ENST00000428997 581 ntBASIC3.64□□□□□ -1.83
UPF2Q9HAU5 AC091286.1-201ENST00000431233 461 ntBASIC3.64□□□□□ -1.83
UPF2Q9HAU5 RPL21P112-201ENST00000434403 463 ntBASIC3.64□□□□□ -1.83
UPF2Q9HAU5 AL512286.1-201ENST00000439244 400 ntBASIC3.64□□□□□ -1.83
UPF2Q9HAU5 MTND1P30-201ENST00000441241 901 ntBASIC3.64□□□□□ -1.83
UPF2Q9HAU5 RPL23AP16-201ENST00000441715 421 ntBASIC3.64□□□□□ -1.83
UPF2Q9HAU5 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.64□□□□□ -1.83
UPF2Q9HAU5 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.64□□□□□ -1.83
UPF2Q9HAU5 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.64□□□□□ -1.83
UPF2Q9HAU5 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.64□□□□□ -1.83
UPF2Q9HAU5 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC3.64□□□□□ -1.83
UPF2Q9HAU5 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.64□□□□□ -1.83
UPF2Q9HAU5 CBX3P3-201ENST00000508108 532 ntBASIC3.64□□□□□ -1.83
UPF2Q9HAU5 AC104057.1-201ENST00000515547 497 ntBASIC3.64□□□□□ -1.83
UPF2Q9HAU5 RNU6-150P-201ENST00000516237 95 ntBASIC3.64□□□□□ -1.83
UPF2Q9HAU5 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.64□□□□□ -1.83
UPF2Q9HAU5 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.64□□□□□ -1.83
UPF2Q9HAU5 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC3.64□□□□□ -1.83
UPF2Q9HAU5 AC007458.1-201ENST00000542812 373 ntBASIC3.64□□□□□ -1.83
UPF2Q9HAU5 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
UPF2Q9HAU5 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.64□□□□□ -1.83
UPF2Q9HAU5 AC006362.1-201ENST00000567392 174 ntBASIC3.64□□□□□ -1.83
UPF2Q9HAU5 MIR4637-201ENST00000582405 84 ntBASIC3.64□□□□□ -1.83
UPF2Q9HAU5 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.64□□□□□ -1.83
UPF2Q9HAU5 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.64□□□□□ -1.83
UPF2Q9HAU5 AC090116.1-201ENST00000615679 446 ntBASIC3.64□□□□□ -1.83
UPF2Q9HAU5 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.64□□□□□ -1.83
UPF2Q9HAU5 AC009878.1-201ENST00000621819 340 ntBASIC3.64□□□□□ -1.83
UPF2Q9HAU5 AC231657.1-201ENST00000624313 397 ntBASIC3.64□□□□□ -1.83
UPF2Q9HAU5 AC130650.2-201ENST00000618736 2403 ntBASIC3.64□□□□□ -1.83
UPF2Q9HAU5 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
UPF2Q9HAU5 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
UPF2Q9HAU5 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
UPF2Q9HAU5 AC073325.2-201ENST00000339545 159 ntBASIC3.63□□□□□ -1.83
UPF2Q9HAU5 SNORA31-201ENST00000362607 130 ntBASIC3.63□□□□□ -1.83
UPF2Q9HAU5 RNU1-33P-201ENST00000364249 162 ntBASIC3.63□□□□□ -1.83
UPF2Q9HAU5 SNORA62.3-201ENST00000365110 153 ntBASIC3.63□□□□□ -1.83
UPF2Q9HAU5 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.63□□□□□ -1.83
UPF2Q9HAU5 Y_RNA.505-201ENST00000384489 102 ntBASIC3.63□□□□□ -1.83
UPF2Q9HAU5 MT-TC-201ENST00000387405 66 ntBASIC3.63□□□□□ -1.83
UPF2Q9HAU5 HMGB1P17-201ENST00000403495 628 ntBASIC3.63□□□□□ -1.83
UPF2Q9HAU5 AL357075.1-201ENST00000404107 726 ntBASIC3.63□□□□□ -1.83
UPF2Q9HAU5 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.63□□□□□ -1.83
UPF2Q9HAU5 AC244098.2-201ENST00000422068 99 ntBASIC3.63□□□□□ -1.83
UPF2Q9HAU5 AL445669.1-201ENST00000426743 755 ntBASIC3.63□□□□□ -1.83
UPF2Q9HAU5 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.63□□□□□ -1.83
UPF2Q9HAU5 VDAC1P3-201ENST00000434069 851 ntBASIC3.63□□□□□ -1.83
UPF2Q9HAU5 USP9YP29-201ENST00000445112 563 ntBASIC3.63□□□□□ -1.83
UPF2Q9HAU5 MTCO1P27-201ENST00000448269 226 ntBASIC3.63□□□□□ -1.83
UPF2Q9HAU5 RPL36AP33-201ENST00000450395 310 ntBASIC3.63□□□□□ -1.83
UPF2Q9HAU5 AC026410.2-201ENST00000460281 156 ntBASIC3.63□□□□□ -1.83
UPF2Q9HAU5 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.63□□□□□ -1.83
UPF2Q9HAU5 MTND4LP22-201ENST00000508209 276 ntBASIC3.63□□□□□ -1.83
UPF2Q9HAU5 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.63□□□□□ -1.83
UPF2Q9HAU5 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
UPF2Q9HAU5 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.63□□□□□ -1.83
UPF2Q9HAU5 RN7SKP272-201ENST00000516988 232 ntBASIC3.63□□□□□ -1.83
UPF2Q9HAU5 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.63□□□□□ -1.83
UPF2Q9HAU5 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
UPF2Q9HAU5 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.63□□□□□ -1.83
UPF2Q9HAU5 AC007536.1-201ENST00000533382 349 ntBASIC3.63□□□□□ -1.83
UPF2Q9HAU5 AC092470.1-201ENST00000546187 132 ntBASIC3.63□□□□□ -1.83
UPF2Q9HAU5 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.63□□□□□ -1.83
UPF2Q9HAU5 AC012213.3-201ENST00000577199 777 ntBASIC3.63□□□□□ -1.83
UPF2Q9HAU5 MIR3158-1-201ENST00000583596 81 ntBASIC3.63□□□□□ -1.83
UPF2Q9HAU5 SNRPGP15-201ENST00000600149 222 ntBASIC3.63□□□□□ -1.83
UPF2Q9HAU5 AC012065.4-201ENST00000602445 679 ntBASIC3.63□□□□□ -1.83
UPF2Q9HAU5 AC004987.4-201ENST00000603383 338 ntBASIC3.63□□□□□ -1.83
UPF2Q9HAU5 AC245389.1-201ENST00000605141 529 ntBASIC3.63□□□□□ -1.83
UPF2Q9HAU5 AC092354.2-201ENST00000607786 514 ntBASIC3.63□□□□□ -1.83
UPF2Q9HAU5 AC025594.3-201ENST00000613068 790 ntBASIC3.63□□□□□ -1.83
UPF2Q9HAU5 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.63□□□□□ -1.83
UPF2Q9HAU5 AC007318.2-201ENST00000620999 243 ntBASIC3.63□□□□□ -1.83
UPF2Q9HAU5 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
UPF2Q9HAU5 AL079343.1-201ENST00000572358 1771 ntBASIC3.63□□□□□ -1.83
UPF2Q9HAU5 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.63□□□□□ -1.83
UPF2Q9HAU5 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.62□□□□□ -1.83
UPF2Q9HAU5 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.62□□□□□ -1.83
UPF2Q9HAU5 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
UPF2Q9HAU5 RNU6-462P-201ENST00000362659 105 ntBASIC3.62□□□□□ -1.83
UPF2Q9HAU5 RNU6-623P-201ENST00000363143 105 ntBASIC3.62□□□□□ -1.83
UPF2Q9HAU5 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
UPF2Q9HAU5 SNORA75-201ENST00000384158 137 ntBASIC3.62□□□□□ -1.83
UPF2Q9HAU5 MIR200C-201ENST00000384980 68 ntBASIC3.62□□□□□ -1.83
UPF2Q9HAU5 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
UPF2Q9HAU5 RNU6-952P-201ENST00000391164 108 ntBASIC3.62□□□□□ -1.83
UPF2Q9HAU5 SNORA48.7-201ENST00000391302 135 ntBASIC3.62□□□□□ -1.83
UPF2Q9HAU5 DEFB108C-201ENST00000400154 252 ntBASIC3.62□□□□□ -1.83
UPF2Q9HAU5 MIR887-201ENST00000401258 79 ntBASIC3.62□□□□□ -1.83
UPF2Q9HAU5 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.62□□□□□ -1.83
UPF2Q9HAU5 AC245052.5-201ENST00000416320 649 ntBASIC3.62□□□□□ -1.83
UPF2Q9HAU5 RPL7P46-201ENST00000425129 740 ntBASIC3.62□□□□□ -1.83
UPF2Q9HAU5 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.62□□□□□ -1.83
UPF2Q9HAU5 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
UPF2Q9HAU5 MED14P1-201ENST00000430517 648 ntBASIC3.62□□□□□ -1.83
UPF2Q9HAU5 AL365184.2-201ENST00000431139 435 ntBASIC3.62□□□□□ -1.83
UPF2Q9HAU5 HMGN2P31-201ENST00000432430 273 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 138.4 ms