Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 SDHCP2-201ENST00000398565 501 ntBASIC4.73□□□□□ -1.65
RNF38Q9H0F5 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.73□□□□□ -1.65
RNF38Q9H0F5 TMSB10P2-201ENST00000416049 131 ntBASIC4.73□□□□□ -1.65
RNF38Q9H0F5 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.73□□□□□ -1.65
RNF38Q9H0F5 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.73□□□□□ -1.65
RNF38Q9H0F5 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.73□□□□□ -1.65
RNF38Q9H0F5 UBE2V1P13-201ENST00000436983 439 ntBASIC4.73□□□□□ -1.65
RNF38Q9H0F5 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.73□□□□□ -1.65
RNF38Q9H0F5 TDGF1P1-201ENST00000445734 527 ntBASIC4.73□□□□□ -1.65
RNF38Q9H0F5 Z95327.1-201ENST00000446082 482 ntBASIC4.73□□□□□ -1.65
RNF38Q9H0F5 AL118520.1-201ENST00000450770 291 ntBASIC4.73□□□□□ -1.65
RNF38Q9H0F5 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.73□□□□□ -1.65
RNF38Q9H0F5 AC104308.1-201ENST00000454621 333 ntBASIC4.73□□□□□ -1.65
RNF38Q9H0F5 AL162395.1-201ENST00000457882 422 ntBASIC4.73□□□□□ -1.65
RNF38Q9H0F5 RPL23AP24-201ENST00000458203 385 ntBASIC4.73□□□□□ -1.65
RNF38Q9H0F5 RNU7-182P-201ENST00000459009 62 ntBASIC4.73□□□□□ -1.65
RNF38Q9H0F5 RNU6-1208P-201ENST00000459588 107 ntBASIC4.73□□□□□ -1.65
RNF38Q9H0F5 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.73□□□□□ -1.65
RNF38Q9H0F5 AC083829.1-201ENST00000503756 657 ntBASIC4.73□□□□□ -1.65
RNF38Q9H0F5 AC093840.1-201ENST00000511599 336 ntBASIC4.73□□□□□ -1.65
RNF38Q9H0F5 IGLVIV-65-201ENST00000517313 360 ntBASIC4.73□□□□□ -1.65
RNF38Q9H0F5 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.73□□□□□ -1.65
RNF38Q9H0F5 RNU6-988P-201ENST00000519081 107 ntBASIC4.73□□□□□ -1.65
RNF38Q9H0F5 HMGB1P41-201ENST00000520234 440 ntBASIC4.73□□□□□ -1.65
RNF38Q9H0F5 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RNF38Q9H0F5 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RNF38Q9H0F5 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.73□□□□□ -1.65
RNF38Q9H0F5 AP000763.2-201ENST00000540641 163 ntBASIC4.73□□□□□ -1.65
RNF38Q9H0F5 MIR5583-1-201ENST00000580941 59 ntBASIC4.73□□□□□ -1.65
RNF38Q9H0F5 VN1R107P-201ENST00000601784 209 ntBASIC4.73□□□□□ -1.65
RNF38Q9H0F5 AC103710.2-201ENST00000609912 942 ntBASIC4.73□□□□□ -1.65
RNF38Q9H0F5 AC245517.5-201ENST00000611529 162 ntBASIC4.73□□□□□ -1.65
RNF38Q9H0F5 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.73□□□□□ -1.65
RNF38Q9H0F5 AC015914.2-201ENST00000618167 288 ntBASIC4.73□□□□□ -1.65
RNF38Q9H0F5 AC244100.1-202ENST00000621554 382 ntBASIC4.73□□□□□ -1.65
RNF38Q9H0F5 AC006065.5-201ENST00000623427 349 ntBASIC4.73□□□□□ -1.65
RNF38Q9H0F5 AC119674.1-207ENST00000641355 633 ntBASIC4.73□□□□□ -1.65
RNF38Q9H0F5 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RNF38Q9H0F5 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.73□□□□□ -1.65
RNF38Q9H0F5 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RNF38Q9H0F5 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
RNF38Q9H0F5 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
RNF38Q9H0F5 FAM91A3P-201ENST00000456826 2544 ntBASIC4.73□□□□□ -1.65
RNF38Q9H0F5 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
RNF38Q9H0F5 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RNF38Q9H0F5 AL592182.3-201ENST00000642132 3304 ntBASIC4.72□□□□□ -1.65
RNF38Q9H0F5 TAB3P1-202ENST00000452645 1634 ntBASIC4.72□□□□□ -1.65
RNF38Q9H0F5 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.72□□□□□ -1.65
RNF38Q9H0F5 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
RNF38Q9H0F5 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RNF38Q9H0F5 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.72□□□□□ -1.65
RNF38Q9H0F5 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
RNF38Q9H0F5 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.72□□□□□ -1.65
RNF38Q9H0F5 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
RNF38Q9H0F5 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.72□□□□□ -1.65
RNF38Q9H0F5 HSPE1P11-201ENST00000339579 310 ntBASIC4.72□□□□□ -1.65
RNF38Q9H0F5 Y_RNA.28-201ENST00000362554 111 ntBASIC4.72□□□□□ -1.65
RNF38Q9H0F5 SNORA70.2-201ENST00000364506 135 ntBASIC4.72□□□□□ -1.65
RNF38Q9H0F5 SNORD51-201ENST00000384320 80 ntBASIC4.72□□□□□ -1.65
RNF38Q9H0F5 RNU6-505P-201ENST00000384427 107 ntBASIC4.72□□□□□ -1.65
RNF38Q9H0F5 MIR19A-201ENST00000384878 82 ntBASIC4.72□□□□□ -1.65
RNF38Q9H0F5 UBE2V1P2-201ENST00000397758 440 ntBASIC4.72□□□□□ -1.65
RNF38Q9H0F5 MIR548K-201ENST00000408406 116 ntBASIC4.72□□□□□ -1.65
RNF38Q9H0F5 RNU4-78P-201ENST00000410940 126 ntBASIC4.72□□□□□ -1.65
RNF38Q9H0F5 RPL37P10-201ENST00000412884 288 ntBASIC4.72□□□□□ -1.65
RNF38Q9H0F5 OR6C66P-201ENST00000414917 930 ntBASIC4.72□□□□□ -1.65
RNF38Q9H0F5 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC4.72□□□□□ -1.65
RNF38Q9H0F5 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.72□□□□□ -1.65
RNF38Q9H0F5 RSL24D1P6-201ENST00000426934 401 ntBASIC4.72□□□□□ -1.65
RNF38Q9H0F5 RPS12P10-201ENST00000427031 377 ntBASIC4.72□□□□□ -1.65
RNF38Q9H0F5 EZH2P1-201ENST00000431167 291 ntBASIC4.72□□□□□ -1.65
RNF38Q9H0F5 AC005019.1-201ENST00000436455 431 ntBASIC4.72□□□□□ -1.65
RNF38Q9H0F5 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.72□□□□□ -1.65
RNF38Q9H0F5 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.72□□□□□ -1.65
RNF38Q9H0F5 RPL23AP43-201ENST00000446445 471 ntBASIC4.72□□□□□ -1.65
RNF38Q9H0F5 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.72□□□□□ -1.65
RNF38Q9H0F5 RPL30P15-201ENST00000457129 321 ntBASIC4.72□□□□□ -1.65
RNF38Q9H0F5 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.72□□□□□ -1.65
RNF38Q9H0F5 TRBVA-201ENST00000498804 316 ntBASIC4.72□□□□□ -1.65
RNF38Q9H0F5 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.72□□□□□ -1.65
RNF38Q9H0F5 AC116562.3-201ENST00000506136 177 ntBASIC4.72□□□□□ -1.65
RNF38Q9H0F5 AC091885.1-201ENST00000506658 268 ntBASIC4.72□□□□□ -1.65
RNF38Q9H0F5 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.72□□□□□ -1.65
RNF38Q9H0F5 RN7SKP24-201ENST00000515888 284 ntBASIC4.72□□□□□ -1.65
RNF38Q9H0F5 RNA5SP503-201ENST00000517047 117 ntBASIC4.72□□□□□ -1.65
RNF38Q9H0F5 AC022634.1-201ENST00000520765 532 ntBASIC4.72□□□□□ -1.65
RNF38Q9H0F5 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.72□□□□□ -1.65
RNF38Q9H0F5 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.72□□□□□ -1.65
RNF38Q9H0F5 AC068587.5-201ENST00000528506 175 ntBASIC4.72□□□□□ -1.65
RNF38Q9H0F5 AC109635.4-202ENST00000531666 412 ntBASIC4.72□□□□□ -1.65
RNF38Q9H0F5 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.72□□□□□ -1.65
RNF38Q9H0F5 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.72□□□□□ -1.65
RNF38Q9H0F5 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RNF38Q9H0F5 PARP1P2-201ENST00000556806 195 ntBASIC4.72□□□□□ -1.65
RNF38Q9H0F5 AC110588.1-201ENST00000559699 137 ntBASIC4.72□□□□□ -1.65
RNF38Q9H0F5 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.72□□□□□ -1.65
RNF38Q9H0F5 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.72□□□□□ -1.65
RNF38Q9H0F5 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.72□□□□□ -1.65
RNF38Q9H0F5 MIR4775-201ENST00000581168 75 ntBASIC4.72□□□□□ -1.65
RNF38Q9H0F5 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms