Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC5.16□□□□□ -1.58
TRIM56Q9BRZ2 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM56Q9BRZ2 RNU6-1332P-201ENST00000516666 104 ntBASIC5.16□□□□□ -1.58
TRIM56Q9BRZ2 AC012400.1-201ENST00000518452 381 ntBASIC5.16□□□□□ -1.58
TRIM56Q9BRZ2 AP005902.1-201ENST00000521358 186 ntBASIC5.16□□□□□ -1.58
TRIM56Q9BRZ2 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.16□□□□□ -1.58
TRIM56Q9BRZ2 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC5.16□□□□□ -1.58
TRIM56Q9BRZ2 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM56Q9BRZ2 MIR6798-201ENST00000612887 67 ntBASIC5.16□□□□□ -1.58
TRIM56Q9BRZ2 AL359547.2-201ENST00000615810 418 ntBASIC5.16□□□□□ -1.58
TRIM56Q9BRZ2 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC5.16□□□□□ -1.58
TRIM56Q9BRZ2 AP001642.1-201ENST00000624727 2117 ntBASIC5.16□□□□□ -1.58
TRIM56Q9BRZ2 AC074101.1-201ENST00000637861 241 ntBASIC5.16□□□□□ -1.58
TRIM56Q9BRZ2 AL732372.2-225ENST00000642124 456 ntBASIC5.16□□□□□ -1.58
TRIM56Q9BRZ2 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM56Q9BRZ2 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM56Q9BRZ2 LINC01355-201ENST00000566551 5444 ntBASIC5.16□□□□□ -1.58
TRIM56Q9BRZ2 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM56Q9BRZ2 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM56Q9BRZ2 AC093849.1-201ENST00000563631 2209 ntBASIC5.16□□□□□ -1.58
TRIM56Q9BRZ2 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM56Q9BRZ2 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
TRIM56Q9BRZ2 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
TRIM56Q9BRZ2 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
TRIM56Q9BRZ2 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.15□□□□□ -1.58
TRIM56Q9BRZ2 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
TRIM56Q9BRZ2 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
TRIM56Q9BRZ2 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
TRIM56Q9BRZ2 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM56Q9BRZ2 Y_RNA.153-201ENST00000363615 91 ntBASIC5.15□□□□□ -1.59
TRIM56Q9BRZ2 Y_RNA.389-201ENST00000383924 113 ntBASIC5.15□□□□□ -1.59
TRIM56Q9BRZ2 MIR153-1-201ENST00000384914 90 ntBASIC5.15□□□□□ -1.59
TRIM56Q9BRZ2 MIR1182-201ENST00000408363 97 ntBASIC5.15□□□□□ -1.59
TRIM56Q9BRZ2 RNU2-43P-201ENST00000410306 190 ntBASIC5.15□□□□□ -1.59
TRIM56Q9BRZ2 RNU6-293P-201ENST00000411259 106 ntBASIC5.15□□□□□ -1.59
TRIM56Q9BRZ2 RNA5SP111-201ENST00000411386 101 ntBASIC5.15□□□□□ -1.59
TRIM56Q9BRZ2 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.15□□□□□ -1.59
TRIM56Q9BRZ2 RPS23P10-201ENST00000416185 486 ntBASIC5.15□□□□□ -1.59
TRIM56Q9BRZ2 AL139148.1-201ENST00000427122 680 ntBASIC5.15□□□□□ -1.59
TRIM56Q9BRZ2 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM56Q9BRZ2 CYCSP43-201ENST00000438233 310 ntBASIC5.15□□□□□ -1.59
TRIM56Q9BRZ2 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC5.15□□□□□ -1.59
TRIM56Q9BRZ2 AC009963.2-201ENST00000453431 138 ntBASIC5.15□□□□□ -1.59
TRIM56Q9BRZ2 Z92846.1-201ENST00000456203 268 ntBASIC5.15□□□□□ -1.59
TRIM56Q9BRZ2 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.15□□□□□ -1.59
TRIM56Q9BRZ2 RN7SL172P-201ENST00000460535 303 ntBASIC5.15□□□□□ -1.59
TRIM56Q9BRZ2 AC005532.2-201ENST00000467154 373 ntBASIC5.15□□□□□ -1.59
TRIM56Q9BRZ2 AC093270.2-201ENST00000486157 792 ntBASIC5.15□□□□□ -1.59
TRIM56Q9BRZ2 AC021146.3-201ENST00000511911 260 ntBASIC5.15□□□□□ -1.59
TRIM56Q9BRZ2 RNU6-352P-201ENST00000516908 107 ntBASIC5.15□□□□□ -1.59
TRIM56Q9BRZ2 RNU6-323P-201ENST00000521915 107 ntBASIC5.15□□□□□ -1.59
TRIM56Q9BRZ2 CYCSP27-201ENST00000527643 293 ntBASIC5.15□□□□□ -1.59
TRIM56Q9BRZ2 AC107918.3-201ENST00000533272 382 ntBASIC5.15□□□□□ -1.59
TRIM56Q9BRZ2 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM56Q9BRZ2 AL121612.2-201ENST00000612261 482 ntBASIC5.15□□□□□ -1.59
TRIM56Q9BRZ2 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.15□□□□□ -1.59
TRIM56Q9BRZ2 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.15□□□□□ -1.59
TRIM56Q9BRZ2 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
TRIM56Q9BRZ2 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.15□□□□□ -1.59
TRIM56Q9BRZ2 CDC27P3-201ENST00000635418 1910 ntBASIC5.15□□□□□ -1.59
TRIM56Q9BRZ2 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM56Q9BRZ2 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM56Q9BRZ2 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.14□□□□□ -1.59
TRIM56Q9BRZ2 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM56Q9BRZ2 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM56Q9BRZ2 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.14□□□□□ -1.59
TRIM56Q9BRZ2 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM56Q9BRZ2 RNU6-1249P-201ENST00000363237 111 ntBASIC5.14□□□□□ -1.59
TRIM56Q9BRZ2 RNU6-238P-201ENST00000363313 106 ntBASIC5.14□□□□□ -1.59
TRIM56Q9BRZ2 RNU6-263P-201ENST00000363811 107 ntBASIC5.14□□□□□ -1.59
TRIM56Q9BRZ2 SNORA23-201ENST00000365128 182 ntBASIC5.14□□□□□ -1.59
TRIM56Q9BRZ2 SNORA2.3-201ENST00000383920 135 ntBASIC5.14□□□□□ -1.59
TRIM56Q9BRZ2 SNORA67-201ENST00000384423 137 ntBASIC5.14□□□□□ -1.59
TRIM56Q9BRZ2 Y_RNA.496-201ENST00000384444 101 ntBASIC5.14□□□□□ -1.59
TRIM56Q9BRZ2 MIR223-201ENST00000385204 110 ntBASIC5.14□□□□□ -1.59
TRIM56Q9BRZ2 RNU6-712P-201ENST00000410558 100 ntBASIC5.14□□□□□ -1.59
TRIM56Q9BRZ2 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM56Q9BRZ2 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM56Q9BRZ2 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC5.14□□□□□ -1.59
TRIM56Q9BRZ2 AC004866.2-201ENST00000438285 481 ntBASIC5.14□□□□□ -1.59
TRIM56Q9BRZ2 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC5.14□□□□□ -1.59
TRIM56Q9BRZ2 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.14□□□□□ -1.59
TRIM56Q9BRZ2 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM56Q9BRZ2 RPS3AP41-201ENST00000462701 778 ntBASIC5.14□□□□□ -1.59
TRIM56Q9BRZ2 RN7SL329P-201ENST00000467740 299 ntBASIC5.14□□□□□ -1.59
TRIM56Q9BRZ2 AC103987.1-201ENST00000473394 348 ntBASIC5.14□□□□□ -1.59
TRIM56Q9BRZ2 AC010655.3-201ENST00000478818 450 ntBASIC5.14□□□□□ -1.59
TRIM56Q9BRZ2 RPS21P4-201ENST00000487122 248 ntBASIC5.14□□□□□ -1.59
TRIM56Q9BRZ2 HIGD1AP14-201ENST00000507617 282 ntBASIC5.14□□□□□ -1.59
TRIM56Q9BRZ2 RNU2-69P-201ENST00000516061 100 ntBASIC5.14□□□□□ -1.59
TRIM56Q9BRZ2 AC008694.2-201ENST00000517591 306 ntBASIC5.14□□□□□ -1.59
TRIM56Q9BRZ2 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.14□□□□□ -1.59
TRIM56Q9BRZ2 BNIP3P1-201ENST00000547295 580 ntBASIC5.14□□□□□ -1.59
TRIM56Q9BRZ2 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.14□□□□□ -1.59
TRIM56Q9BRZ2 RPL23AP84-201ENST00000571193 464 ntBASIC5.14□□□□□ -1.59
TRIM56Q9BRZ2 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.14□□□□□ -1.59
TRIM56Q9BRZ2 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.14□□□□□ -1.59
TRIM56Q9BRZ2 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM56Q9BRZ2 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM56Q9BRZ2 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms