Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC5.55□□□□□ -1.52
USB1Q9BQ65 FAM27E2-201ENST00000619668 403 ntBASIC5.55□□□□□ -1.52
USB1Q9BQ65 AL353748.2-201ENST00000622148 471 ntBASIC5.55□□□□□ -1.52
USB1Q9BQ65 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.55□□□□□ -1.52
USB1Q9BQ65 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
USB1Q9BQ65 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
USB1Q9BQ65 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
USB1Q9BQ65 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
USB1Q9BQ65 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
USB1Q9BQ65 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
USB1Q9BQ65 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
USB1Q9BQ65 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
USB1Q9BQ65 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
USB1Q9BQ65 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
USB1Q9BQ65 THAP12P9-201ENST00000503971 2360 ntBASIC5.55□□□□□ -1.52
USB1Q9BQ65 AL445487.1-201ENST00000415694 1580 ntBASIC5.55□□□□□ -1.52
USB1Q9BQ65 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
USB1Q9BQ65 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
USB1Q9BQ65 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
USB1Q9BQ65 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
USB1Q9BQ65 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
USB1Q9BQ65 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.54□□□□□ -1.52
USB1Q9BQ65 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
USB1Q9BQ65 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
USB1Q9BQ65 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
USB1Q9BQ65 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
USB1Q9BQ65 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
USB1Q9BQ65 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
USB1Q9BQ65 Y_RNA.136-201ENST00000363444 102 ntBASIC5.54□□□□□ -1.52
USB1Q9BQ65 Y_RNA.215-201ENST00000364204 112 ntBASIC5.54□□□□□ -1.52
USB1Q9BQ65 Y_RNA.353-201ENST00000365440 108 ntBASIC5.54□□□□□ -1.52
USB1Q9BQ65 MIR34A-201ENST00000385130 110 ntBASIC5.54□□□□□ -1.52
USB1Q9BQ65 RNU6-837P-201ENST00000391056 108 ntBASIC5.54□□□□□ -1.52
USB1Q9BQ65 UBA52P6-201ENST00000399822 382 ntBASIC5.54□□□□□ -1.52
USB1Q9BQ65 Y_RNA.597-201ENST00000410463 100 ntBASIC5.54□□□□□ -1.52
USB1Q9BQ65 RPL23AP26-201ENST00000412728 464 ntBASIC5.54□□□□□ -1.52
USB1Q9BQ65 AL390729.2-201ENST00000416137 156 ntBASIC5.54□□□□□ -1.52
USB1Q9BQ65 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.54□□□□□ -1.52
USB1Q9BQ65 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.54□□□□□ -1.52
USB1Q9BQ65 AC024067.1-201ENST00000426199 223 ntBASIC5.54□□□□□ -1.52
USB1Q9BQ65 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.54□□□□□ -1.52
USB1Q9BQ65 FTLP19-201ENST00000433300 394 ntBASIC5.54□□□□□ -1.52
USB1Q9BQ65 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.54□□□□□ -1.52
USB1Q9BQ65 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.54□□□□□ -1.52
USB1Q9BQ65 GAPDHP25-201ENST00000447061 1001 ntBASIC5.54□□□□□ -1.52
USB1Q9BQ65 SSXP4-201ENST00000451349 245 ntBASIC5.54□□□□□ -1.52
USB1Q9BQ65 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC5.54□□□□□ -1.52
USB1Q9BQ65 AL049874.1-201ENST00000489560 388 ntBASIC5.54□□□□□ -1.52
USB1Q9BQ65 AC083795.1-201ENST00000491760 320 ntBASIC5.54□□□□□ -1.52
USB1Q9BQ65 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC5.54□□□□□ -1.52
USB1Q9BQ65 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC5.54□□□□□ -1.52
USB1Q9BQ65 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
USB1Q9BQ65 AC005332.4-201ENST00000592752 579 ntBASIC5.54□□□□□ -1.52
USB1Q9BQ65 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.54□□□□□ -1.52
USB1Q9BQ65 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.54□□□□□ -1.52
USB1Q9BQ65 AC005828.6-201ENST00000606610 232 ntBASIC5.54□□□□□ -1.52
USB1Q9BQ65 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.54□□□□□ -1.52
USB1Q9BQ65 RMST_6.1-201ENST00000611980 203 ntBASIC5.54□□□□□ -1.52
USB1Q9BQ65 MRPL57P1-201ENST00000621486 265 ntBASIC5.54□□□□□ -1.52
USB1Q9BQ65 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC5.54□□□□□ -1.52
USB1Q9BQ65 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.54□□□□□ -1.52
USB1Q9BQ65 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
USB1Q9BQ65 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC5.54□□□□□ -1.52
USB1Q9BQ65 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
USB1Q9BQ65 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
USB1Q9BQ65 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
USB1Q9BQ65 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.54□□□□□ -1.52
USB1Q9BQ65 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.54□□□□□ -1.52
USB1Q9BQ65 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.54□□□□□ -1.52
USB1Q9BQ65 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
USB1Q9BQ65 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.54□□□□□ -1.52
USB1Q9BQ65 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
USB1Q9BQ65 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
USB1Q9BQ65 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
USB1Q9BQ65 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
USB1Q9BQ65 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.53□□□□□ -1.52
USB1Q9BQ65 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.53□□□□□ -1.52
USB1Q9BQ65 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
USB1Q9BQ65 AL161756.3-201ENST00000641216 2071 ntBASIC5.53□□□□□ -1.52
USB1Q9BQ65 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
USB1Q9BQ65 RNA5SP361-201ENST00000362686 118 ntBASIC5.53□□□□□ -1.52
USB1Q9BQ65 RNU6-626P-201ENST00000363354 107 ntBASIC5.53□□□□□ -1.52
USB1Q9BQ65 RNA5SP478-201ENST00000364657 115 ntBASIC5.53□□□□□ -1.52
USB1Q9BQ65 RNU5E-7P-201ENST00000365290 117 ntBASIC5.53□□□□□ -1.52
USB1Q9BQ65 Y_RNA.570-201ENST00000384750 101 ntBASIC5.53□□□□□ -1.52
USB1Q9BQ65 RNU1-139P-201ENST00000391307 165 ntBASIC5.53□□□□□ -1.52
USB1Q9BQ65 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC5.53□□□□□ -1.52
USB1Q9BQ65 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC5.53□□□□□ -1.52
USB1Q9BQ65 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.53□□□□□ -1.52
USB1Q9BQ65 AC011742.1-201ENST00000431448 434 ntBASIC5.53□□□□□ -1.52
USB1Q9BQ65 POLR2KP2-201ENST00000438155 177 ntBASIC5.53□□□□□ -1.52
USB1Q9BQ65 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.53□□□□□ -1.52
USB1Q9BQ65 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.53□□□□□ -1.52
USB1Q9BQ65 MRPS10P1-201ENST00000448483 130 ntBASIC5.53□□□□□ -1.52
USB1Q9BQ65 RPL23AP24-201ENST00000458203 385 ntBASIC5.53□□□□□ -1.52
USB1Q9BQ65 AP000870.1-201ENST00000472927 406 ntBASIC5.53□□□□□ -1.52
USB1Q9BQ65 RPL26P26-201ENST00000480251 434 ntBASIC5.53□□□□□ -1.52
USB1Q9BQ65 AC092824.1-201ENST00000483524 576 ntBASIC5.53□□□□□ -1.52
USB1Q9BQ65 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.53□□□□□ -1.52
USB1Q9BQ65 AC114781.3-201ENST00000512083 142 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms