Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VRK1Q99986 SNORA71.2-201ENST00000364941 134 ntBASIC4.05□□□□□ -1.76
VRK1Q99986 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VRK1Q99986 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VRK1Q99986 RNU6-701P-201ENST00000384059 107 ntBASIC4.05□□□□□ -1.76
VRK1Q99986 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
VRK1Q99986 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
VRK1Q99986 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.05□□□□□ -1.76
VRK1Q99986 CALM2P2-201ENST00000428512 440 ntBASIC4.05□□□□□ -1.76
VRK1Q99986 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.05□□□□□ -1.76
VRK1Q99986 SNRPEP8-201ENST00000442866 260 ntBASIC4.05□□□□□ -1.76
VRK1Q99986 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.05□□□□□ -1.76
VRK1Q99986 CBWD4P-201ENST00000445695 655 ntBASIC4.05□□□□□ -1.76
VRK1Q99986 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.05□□□□□ -1.76
VRK1Q99986 AL118520.1-201ENST00000450770 291 ntBASIC4.05□□□□□ -1.76
VRK1Q99986 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.05□□□□□ -1.76
VRK1Q99986 AC012158.1-204ENST00000483430 465 ntBASIC4.05□□□□□ -1.76
VRK1Q99986 RPL23AP55-201ENST00000498163 452 ntBASIC4.05□□□□□ -1.76
VRK1Q99986 AC114786.4-201ENST00000508771 728 ntBASIC4.05□□□□□ -1.76
VRK1Q99986 AC004062.1-201ENST00000509926 645 ntBASIC4.05□□□□□ -1.76
VRK1Q99986 AC098591.2-201ENST00000510152 315 ntBASIC4.05□□□□□ -1.76
VRK1Q99986 AC108078.2-201ENST00000510750 236 ntBASIC4.05□□□□□ -1.76
VRK1Q99986 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.05□□□□□ -1.76
VRK1Q99986 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.05□□□□□ -1.76
VRK1Q99986 GMPSP1-201ENST00000514075 579 ntBASIC4.05□□□□□ -1.76
VRK1Q99986 RNU4-29P-201ENST00000515943 174 ntBASIC4.05□□□□□ -1.76
VRK1Q99986 RNU6-875P-201ENST00000516488 106 ntBASIC4.05□□□□□ -1.76
VRK1Q99986 RNU6-352P-201ENST00000516908 107 ntBASIC4.05□□□□□ -1.76
VRK1Q99986 AL352979.3-201ENST00000553515 247 ntBASIC4.05□□□□□ -1.76
VRK1Q99986 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.05□□□□□ -1.76
VRK1Q99986 RN7SL652P-201ENST00000577769 300 ntBASIC4.05□□□□□ -1.76
VRK1Q99986 MIR5699-201ENST00000578903 90 ntBASIC4.05□□□□□ -1.76
VRK1Q99986 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.05□□□□□ -1.76
VRK1Q99986 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.05□□□□□ -1.76
VRK1Q99986 AC009994.1-201ENST00000606889 253 ntBASIC4.05□□□□□ -1.76
VRK1Q99986 AL365204.3-201ENST00000612448 685 ntBASIC4.05□□□□□ -1.76
VRK1Q99986 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VRK1Q99986 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.05□□□□□ -1.76
VRK1Q99986 AC004825.2-201ENST00000616634 455 ntBASIC4.05□□□□□ -1.76
VRK1Q99986 AC104985.2-201ENST00000620598 500 ntBASIC4.05□□□□□ -1.76
VRK1Q99986 MIR7703-201ENST00000620784 77 ntBASIC4.05□□□□□ -1.76
VRK1Q99986 AL589994.2-201ENST00000621124 579 ntBASIC4.05□□□□□ -1.76
VRK1Q99986 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.05□□□□□ -1.76
VRK1Q99986 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.05□□□□□ -1.76
VRK1Q99986 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
VRK1Q99986 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
VRK1Q99986 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
VRK1Q99986 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.05□□□□□ -1.76
VRK1Q99986 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
VRK1Q99986 AL354685.2-201ENST00000448218 1447 ntBASIC4.04□□□□□ -1.76
VRK1Q99986 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
VRK1Q99986 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.04□□□□□ -1.76
VRK1Q99986 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VRK1Q99986 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VRK1Q99986 DEFB108F-201ENST00000344638 222 ntBASIC4.04□□□□□ -1.76
VRK1Q99986 RNU1-32P-201ENST00000363937 159 ntBASIC4.04□□□□□ -1.76
VRK1Q99986 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
VRK1Q99986 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
VRK1Q99986 Y_RNA.576-201ENST00000384781 102 ntBASIC4.04□□□□□ -1.76
VRK1Q99986 RN7SKP267-201ENST00000410381 285 ntBASIC4.04□□□□□ -1.76
VRK1Q99986 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC4.04□□□□□ -1.76
VRK1Q99986 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.04□□□□□ -1.76
VRK1Q99986 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.04□□□□□ -1.76
VRK1Q99986 AC008850.1-201ENST00000427546 362 ntBASIC4.04□□□□□ -1.76
VRK1Q99986 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.04□□□□□ -1.76
VRK1Q99986 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC4.04□□□□□ -1.76
VRK1Q99986 MTND3P16-201ENST00000452205 344 ntBASIC4.04□□□□□ -1.76
VRK1Q99986 AP000873.1-201ENST00000463987 400 ntBASIC4.04□□□□□ -1.76
VRK1Q99986 HSPE1P6-201ENST00000479457 291 ntBASIC4.04□□□□□ -1.76
VRK1Q99986 VN1R105P-201ENST00000486595 910 ntBASIC4.04□□□□□ -1.76
VRK1Q99986 AC106872.2-201ENST00000494303 480 ntBASIC4.04□□□□□ -1.76
VRK1Q99986 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.04□□□□□ -1.76
VRK1Q99986 AC078918.1-201ENST00000498515 228 ntBASIC4.04□□□□□ -1.76
VRK1Q99986 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VRK1Q99986 SCARNA22-201ENST00000503991 125 ntBASIC4.04□□□□□ -1.76
VRK1Q99986 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.04□□□□□ -1.76
VRK1Q99986 AC108475.1-201ENST00000507880 950 ntBASIC4.04□□□□□ -1.76
VRK1Q99986 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VRK1Q99986 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.04□□□□□ -1.76
VRK1Q99986 AC108043.1-201ENST00000512696 574 ntBASIC4.04□□□□□ -1.76
VRK1Q99986 LRRC34P2-201ENST00000514850 553 ntBASIC4.04□□□□□ -1.76
VRK1Q99986 SNORA31.3-201ENST00000516029 96 ntBASIC4.04□□□□□ -1.76
VRK1Q99986 RNU6-507P-201ENST00000516045 100 ntBASIC4.04□□□□□ -1.76
VRK1Q99986 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.04□□□□□ -1.76
VRK1Q99986 BNIP3P6-201ENST00000549284 499 ntBASIC4.04□□□□□ -1.76
VRK1Q99986 AC007424.1-203ENST00000554613 687 ntBASIC4.04□□□□□ -1.76
VRK1Q99986 MTND6P33-201ENST00000571794 183 ntBASIC4.04□□□□□ -1.76
VRK1Q99986 MIR4424-201ENST00000585257 86 ntBASIC4.04□□□□□ -1.76
VRK1Q99986 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.04□□□□□ -1.76
VRK1Q99986 AC067852.3-201ENST00000589177 561 ntBASIC4.04□□□□□ -1.76
VRK1Q99986 AC025946.2-201ENST00000603398 234 ntBASIC4.04□□□□□ -1.76
VRK1Q99986 AC019193.2-201ENST00000610012 634 ntBASIC4.04□□□□□ -1.76
VRK1Q99986 MIR378J-201ENST00000611988 109 ntBASIC4.04□□□□□ -1.76
VRK1Q99986 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
VRK1Q99986 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.04□□□□□ -1.76
VRK1Q99986 AP001350.1-201ENST00000601906 1524 ntBASIC4.04□□□□□ -1.76
VRK1Q99986 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
VRK1Q99986 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
VRK1Q99986 PRO1804-201ENST00000623780 2050 ntBASIC4.04□□□□□ -1.76
VRK1Q99986 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms