Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.74
SMOQ99835 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.15□□□□□ -1.74
SMOQ99835 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
SMOQ99835 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
SMOQ99835 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SMOQ99835 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SMOQ99835 CBX3P1-201ENST00000325243 554 ntBASIC4.15□□□□□ -1.75
SMOQ99835 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SMOQ99835 RNU6-1068P-201ENST00000410958 103 ntBASIC4.15□□□□□ -1.75
SMOQ99835 RNU2-41P-201ENST00000410991 178 ntBASIC4.15□□□□□ -1.75
SMOQ99835 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.15□□□□□ -1.75
SMOQ99835 AC012498.1-201ENST00000424037 437 ntBASIC4.15□□□□□ -1.75
SMOQ99835 MRPS18BP2-201ENST00000434310 759 ntBASIC4.15□□□□□ -1.75
SMOQ99835 AC098614.3-201ENST00000438957 440 ntBASIC4.15□□□□□ -1.75
SMOQ99835 CALM1P1-201ENST00000442082 433 ntBASIC4.15□□□□□ -1.75
SMOQ99835 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC4.15□□□□□ -1.75
SMOQ99835 RPL29P29-201ENST00000448725 423 ntBASIC4.15□□□□□ -1.75
SMOQ99835 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.15□□□□□ -1.75
SMOQ99835 CACYBPP2-201ENST00000453625 678 ntBASIC4.15□□□□□ -1.75
SMOQ99835 AC007967.1-201ENST00000455422 1159 ntBASIC4.15□□□□□ -1.75
SMOQ99835 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.15□□□□□ -1.75
SMOQ99835 RNU6-261P-201ENST00000459506 102 ntBASIC4.15□□□□□ -1.75
SMOQ99835 AP000852.1-201ENST00000472460 573 ntBASIC4.15□□□□□ -1.75
SMOQ99835 PPIAP15-201ENST00000479662 484 ntBASIC4.15□□□□□ -1.75
SMOQ99835 AC233702.1-201ENST00000482905 502 ntBASIC4.15□□□□□ -1.75
SMOQ99835 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.15□□□□□ -1.75
SMOQ99835 RPL31P61-201ENST00000496160 376 ntBASIC4.15□□□□□ -1.75
SMOQ99835 AC068305.1-201ENST00000497406 726 ntBASIC4.15□□□□□ -1.75
SMOQ99835 MTCO2P30-201ENST00000503662 364 ntBASIC4.15□□□□□ -1.75
SMOQ99835 AC114786.4-201ENST00000508771 728 ntBASIC4.15□□□□□ -1.75
SMOQ99835 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.75
SMOQ99835 RNA5SP401-201ENST00000515920 127 ntBASIC4.15□□□□□ -1.75
SMOQ99835 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.15□□□□□ -1.75
SMOQ99835 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.15□□□□□ -1.75
SMOQ99835 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.15□□□□□ -1.75
SMOQ99835 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.15□□□□□ -1.75
SMOQ99835 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.15□□□□□ -1.75
SMOQ99835 MIR1254-2-201ENST00000579553 63 ntBASIC4.15□□□□□ -1.75
SMOQ99835 AC008945.2-201ENST00000606056 604 ntBASIC4.15□□□□□ -1.75
SMOQ99835 AL121992.2-201ENST00000606262 256 ntBASIC4.15□□□□□ -1.75
SMOQ99835 AL158211.4-201ENST00000606988 584 ntBASIC4.15□□□□□ -1.75
SMOQ99835 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.15□□□□□ -1.75
SMOQ99835 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.15□□□□□ -1.75
SMOQ99835 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SMOQ99835 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.15□□□□□ -1.75
SMOQ99835 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SMOQ99835 MTCO1P24-201ENST00000515438 1558 ntBASIC4.14□□□□□ -1.75
SMOQ99835 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.14□□□□□ -1.75
SMOQ99835 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.14□□□□□ -1.75
SMOQ99835 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.14□□□□□ -1.75
SMOQ99835 ZNF962P-201ENST00000443465 3140 ntBASIC4.14□□□□□ -1.75
SMOQ99835 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.14□□□□□ -1.75
SMOQ99835 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
SMOQ99835 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
SMOQ99835 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SMOQ99835 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SMOQ99835 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SMOQ99835 RNU6-511P-201ENST00000363496 107 ntBASIC4.14□□□□□ -1.75
SMOQ99835 U3.11-201ENST00000364476 212 ntBASIC4.14□□□□□ -1.75
SMOQ99835 Y_RNA.367-201ENST00000365544 101 ntBASIC4.14□□□□□ -1.75
SMOQ99835 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
SMOQ99835 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SMOQ99835 RPL7AP73-201ENST00000413490 353 ntBASIC4.14□□□□□ -1.75
SMOQ99835 RPL7P2-201ENST00000427639 268 ntBASIC4.14□□□□□ -1.75
SMOQ99835 CKS1BP5-201ENST00000434172 273 ntBASIC4.14□□□□□ -1.75
SMOQ99835 RPS20P5-201ENST00000434808 360 ntBASIC4.14□□□□□ -1.75
SMOQ99835 AC069285.2-201ENST00000440210 275 ntBASIC4.14□□□□□ -1.75
SMOQ99835 AC006480.1-201ENST00000449887 378 ntBASIC4.14□□□□□ -1.75
SMOQ99835 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.14□□□□□ -1.75
SMOQ99835 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.14□□□□□ -1.75
SMOQ99835 RPS3AP50-201ENST00000487064 803 ntBASIC4.14□□□□□ -1.75
SMOQ99835 RPL39P36-201ENST00000490784 156 ntBASIC4.14□□□□□ -1.75
SMOQ99835 HMGN1P12-201ENST00000499125 195 ntBASIC4.14□□□□□ -1.75
SMOQ99835 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.14□□□□□ -1.75
SMOQ99835 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.14□□□□□ -1.75
SMOQ99835 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.14□□□□□ -1.75
SMOQ99835 CENPUP1-201ENST00000526649 1202 ntBASIC4.14□□□□□ -1.75
SMOQ99835 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.14□□□□□ -1.75
SMOQ99835 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.14□□□□□ -1.75
SMOQ99835 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.14□□□□□ -1.75
SMOQ99835 AC069240.1-201ENST00000548774 375 ntBASIC4.14□□□□□ -1.75
SMOQ99835 HSPE1P5-201ENST00000561489 272 ntBASIC4.14□□□□□ -1.75
SMOQ99835 AC055876.1-202ENST00000567053 138 ntBASIC4.14□□□□□ -1.75
SMOQ99835 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.14□□□□□ -1.75
SMOQ99835 OR4K8P-201ENST00000578842 1048 ntBASIC4.14□□□□□ -1.75
SMOQ99835 MIR4458-201ENST00000578872 75 ntBASIC4.14□□□□□ -1.75
SMOQ99835 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.14□□□□□ -1.75
SMOQ99835 FGF7P1-201ENST00000582820 288 ntBASIC4.14□□□□□ -1.75
SMOQ99835 AC005255.1-201ENST00000593748 216 ntBASIC4.14□□□□□ -1.75
SMOQ99835 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.14□□□□□ -1.75
SMOQ99835 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.14□□□□□ -1.75
SMOQ99835 AL354798.1-201ENST00000622505 329 ntBASIC4.14□□□□□ -1.75
SMOQ99835 FP236240.3-201ENST00000623061 327 ntBASIC4.14□□□□□ -1.75
SMOQ99835 AC138649.5-201ENST00000637456 137 ntBASIC4.14□□□□□ -1.75
SMOQ99835 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
SMOQ99835 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.14□□□□□ -1.75
SMOQ99835 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SMOQ99835 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.14□□□□□ -1.75
SMOQ99835 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SMOQ99835 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms