Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC092155.2-201ENST00000454675 477 ntBASIC2.17□□□□□ -2.06
ABCA3Q99758 AC079203.1-201ENST00000487972 404 ntBASIC2.17□□□□□ -2.06
ABCA3Q99758 AC023424.2-201ENST00000493479 777 ntBASIC2.17□□□□□ -2.06
ABCA3Q99758 AC008015.1-201ENST00000555505 465 ntBASIC2.17□□□□□ -2.06
ABCA3Q99758 CENPUP2-201ENST00000555897 1186 ntBASIC2.17□□□□□ -2.06
ABCA3Q99758 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.17□□□□□ -2.06
ABCA3Q99758 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
ABCA3Q99758 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.17□□□□□ -2.06
ABCA3Q99758 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.17□□□□□ -2.06
ABCA3Q99758 RNU6-1180P-201ENST00000364935 107 ntBASIC2.17□□□□□ -2.06
ABCA3Q99758 RPL17P12-201ENST00000413391 526 ntBASIC2.17□□□□□ -2.06
ABCA3Q99758 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.17□□□□□ -2.06
ABCA3Q99758 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.17□□□□□ -2.06
ABCA3Q99758 Z96811.1-201ENST00000445880 108 ntBASIC2.17□□□□□ -2.06
ABCA3Q99758 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
ABCA3Q99758 AC092991.1-201ENST00000477176 376 ntBASIC2.17□□□□□ -2.06
ABCA3Q99758 RPS15AP36-201ENST00000492022 382 ntBASIC2.17□□□□□ -2.06
ABCA3Q99758 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.17□□□□□ -2.06
ABCA3Q99758 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC2.17□□□□□ -2.06
ABCA3Q99758 AC021146.7-201ENST00000509604 775 ntBASIC2.17□□□□□ -2.06
ABCA3Q99758 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.17□□□□□ -2.06
ABCA3Q99758 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.17□□□□□ -2.06
ABCA3Q99758 AC008687.2-201ENST00000597865 520 ntBASIC2.17□□□□□ -2.06
ABCA3Q99758 MIR6895-201ENST00000613497 78 ntBASIC2.17□□□□□ -2.06
ABCA3Q99758 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
ABCA3Q99758 SNORA51.2-201ENST00000364595 132 ntBASIC2.16□□□□□ -2.06
ABCA3Q99758 SNORA16.1-201ENST00000364597 132 ntBASIC2.16□□□□□ -2.06
ABCA3Q99758 RNU6-342P-201ENST00000384521 104 ntBASIC2.16□□□□□ -2.06
ABCA3Q99758 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
ABCA3Q99758 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.16□□□□□ -2.06
ABCA3Q99758 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.16□□□□□ -2.06
ABCA3Q99758 HMGB1P45-201ENST00000435986 653 ntBASIC2.16□□□□□ -2.06
ABCA3Q99758 HNRNPDLP3-201ENST00000456745 380 ntBASIC2.16□□□□□ -2.06
ABCA3Q99758 AC107398.1-201ENST00000486904 505 ntBASIC2.16□□□□□ -2.06
ABCA3Q99758 SEM1P1-201ENST00000506694 209 ntBASIC2.16□□□□□ -2.06
ABCA3Q99758 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.16□□□□□ -2.06
ABCA3Q99758 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.16□□□□□ -2.06
ABCA3Q99758 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC2.16□□□□□ -2.06
ABCA3Q99758 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.16□□□□□ -2.06
ABCA3Q99758 AL109653.1-201ENST00000603091 248 ntBASIC2.16□□□□□ -2.06
ABCA3Q99758 AC006065.5-201ENST00000623427 349 ntBASIC2.16□□□□□ -2.06
ABCA3Q99758 MIR96-201ENST00000362288 78 ntBASIC2.15□□□□□ -2.07
ABCA3Q99758 MCTS2P-201ENST00000394552 546 ntBASIC2.15□□□□□ -2.07
ABCA3Q99758 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.15□□□□□ -2.07
ABCA3Q99758 HMGN2P16-201ENST00000456802 261 ntBASIC2.15□□□□□ -2.07
ABCA3Q99758 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
ABCA3Q99758 RPL37P25-201ENST00000507308 276 ntBASIC2.15□□□□□ -2.07
ABCA3Q99758 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.15□□□□□ -2.07
ABCA3Q99758 ATP5EP1-201ENST00000510257 156 ntBASIC2.15□□□□□ -2.07
ABCA3Q99758 AC109471.1-201ENST00000511631 612 ntBASIC2.15□□□□□ -2.07
ABCA3Q99758 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC2.15□□□□□ -2.07
ABCA3Q99758 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.15□□□□□ -2.07
ABCA3Q99758 AL078603.1-201ENST00000603824 313 ntBASIC2.15□□□□□ -2.07
ABCA3Q99758 AP003072.4-201ENST00000624580 310 ntBASIC2.15□□□□□ -2.07
ABCA3Q99758 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.15□□□□□ -2.07
ABCA3Q99758 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
ABCA3Q99758 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
ABCA3Q99758 RNF6P1-201ENST00000444889 1784 ntBASIC2.14□□□□□ -2.07
ABCA3Q99758 RNA5SP393-201ENST00000363423 117 ntBASIC2.14□□□□□ -2.07
ABCA3Q99758 RNU6-60P-201ENST00000364792 103 ntBASIC2.14□□□□□ -2.07
ABCA3Q99758 FO393413.1-201ENST00000402892 195 ntBASIC2.14□□□□□ -2.07
ABCA3Q99758 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC2.14□□□□□ -2.07
ABCA3Q99758 BX682237.1-201ENST00000415016 335 ntBASIC2.14□□□□□ -2.07
ABCA3Q99758 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.14□□□□□ -2.07
ABCA3Q99758 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.14□□□□□ -2.07
ABCA3Q99758 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.14□□□□□ -2.07
ABCA3Q99758 AC069277.2-201ENST00000454211 432 ntBASIC2.14□□□□□ -2.07
ABCA3Q99758 LTV1P1-201ENST00000510683 1237 ntBASIC2.14□□□□□ -2.07
ABCA3Q99758 SNRPGP15-201ENST00000600149 222 ntBASIC2.14□□□□□ -2.07
ABCA3Q99758 DUXAP4-201ENST00000603046 613 ntBASIC2.14□□□□□ -2.07
ABCA3Q99758 AC013444.2-201ENST00000603317 787 ntBASIC2.14□□□□□ -2.07
ABCA3Q99758 AL157834.3-201ENST00000615543 103 ntBASIC2.14□□□□□ -2.07
ABCA3Q99758 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
ABCA3Q99758 OR4G1P-203ENST00000641984 1631 ntBASIC2.14□□□□□ -2.07
ABCA3Q99758 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.14□□□□□ -2.07
ABCA3Q99758 AC092638.1-201ENST00000411966 1275 ntBASIC2.14□□□□□ -2.07
ABCA3Q99758 OR51B8P-201ENST00000449892 769 ntBASIC2.14□□□□□ -2.07
ABCA3Q99758 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.14□□□□□ -2.07
ABCA3Q99758 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.14□□□□□ -2.07
ABCA3Q99758 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.14□□□□□ -2.07
ABCA3Q99758 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.14□□□□□ -2.07
ABCA3Q99758 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.14□□□□□ -2.07
ABCA3Q99758 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC2.14□□□□□ -2.07
ABCA3Q99758 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.14□□□□□ -2.07
ABCA3Q99758 MIR3199-2-201ENST00000636243 86 ntBASIC2.14□□□□□ -2.07
ABCA3Q99758 SNORA7.2-201ENST00000364446 145 ntBASIC2.13□□□□□ -2.07
ABCA3Q99758 SNORD114-22-201ENST00000365423 72 ntBASIC2.13□□□□□ -2.07
ABCA3Q99758 AC244098.2-201ENST00000422068 99 ntBASIC2.13□□□□□ -2.07
ABCA3Q99758 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.13□□□□□ -2.07
ABCA3Q99758 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
ABCA3Q99758 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC2.13□□□□□ -2.07
ABCA3Q99758 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.13□□□□□ -2.07
ABCA3Q99758 AC009901.1-201ENST00000506703 541 ntBASIC2.13□□□□□ -2.07
ABCA3Q99758 AC034244.1-201ENST00000507687 207 ntBASIC2.13□□□□□ -2.07
ABCA3Q99758 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.13□□□□□ -2.07
ABCA3Q99758 SNORA31.11-201ENST00000516528 139 ntBASIC2.13□□□□□ -2.07
ABCA3Q99758 RNA5SP468-201ENST00000516782 93 ntBASIC2.13□□□□□ -2.07
ABCA3Q99758 RNU1-40P-201ENST00000516816 164 ntBASIC2.13□□□□□ -2.07
ABCA3Q99758 RNU1-97P-201ENST00000516872 164 ntBASIC2.13□□□□□ -2.07
ABCA3Q99758 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms