Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.81□□□□□ -1.96
NPAS2Q99743 AP000857.1-201ENST00000532151 543 ntBASIC2.81□□□□□ -1.96
NPAS2Q99743 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.81□□□□□ -1.96
NPAS2Q99743 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.81□□□□□ -1.96
NPAS2Q99743 AC090695.1-201ENST00000561269 1222 ntBASIC2.81□□□□□ -1.96
NPAS2Q99743 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
NPAS2Q99743 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.81□□□□□ -1.96
NPAS2Q99743 LARP7P3-201ENST00000579888 337 ntBASIC2.81□□□□□ -1.96
NPAS2Q99743 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.81□□□□□ -1.96
NPAS2Q99743 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.81□□□□□ -1.96
NPAS2Q99743 AC006504.3-201ENST00000586818 523 ntBASIC2.81□□□□□ -1.96
NPAS2Q99743 VN1R83P-201ENST00000595685 445 ntBASIC2.81□□□□□ -1.96
NPAS2Q99743 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.81□□□□□ -1.96
NPAS2Q99743 AP001429.1-201ENST00000602568 530 ntBASIC2.81□□□□□ -1.96
NPAS2Q99743 U73023.1-201ENST00000603134 700 ntBASIC2.81□□□□□ -1.96
NPAS2Q99743 AL158050.2-201ENST00000605336 568 ntBASIC2.81□□□□□ -1.96
NPAS2Q99743 AL139022.2-201ENST00000606934 443 ntBASIC2.81□□□□□ -1.96
NPAS2Q99743 AL590099.1-201ENST00000615276 138 ntBASIC2.81□□□□□ -1.96
NPAS2Q99743 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
NPAS2Q99743 AL355493.4-201ENST00000618530 292 ntBASIC2.81□□□□□ -1.96
NPAS2Q99743 AC002550.2-201ENST00000621246 394 ntBASIC2.81□□□□□ -1.96
NPAS2Q99743 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.81□□□□□ -1.96
NPAS2Q99743 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
NPAS2Q99743 AL079343.1-201ENST00000572358 1771 ntBASIC2.81□□□□□ -1.96
NPAS2Q99743 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.8□□□□□ -1.96
NPAS2Q99743 AL035425.3-201ENST00000564206 4996 ntBASIC2.8□□□□□ -1.96
NPAS2Q99743 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
NPAS2Q99743 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.8□□□□□ -1.96
NPAS2Q99743 MTCO1P9-201ENST00000505577 1534 ntBASIC2.8□□□□□ -1.96
NPAS2Q99743 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
NPAS2Q99743 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
NPAS2Q99743 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.8□□□□□ -1.96
NPAS2Q99743 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.8□□□□□ -1.96
NPAS2Q99743 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.8□□□□□ -1.96
NPAS2Q99743 AL139281.1-201ENST00000422120 335 ntBASIC2.8□□□□□ -1.96
NPAS2Q99743 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.8□□□□□ -1.96
NPAS2Q99743 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC2.8□□□□□ -1.96
NPAS2Q99743 AL139132.1-201ENST00000431587 344 ntBASIC2.8□□□□□ -1.96
NPAS2Q99743 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
NPAS2Q99743 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.8□□□□□ -1.96
NPAS2Q99743 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.8□□□□□ -1.96
NPAS2Q99743 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.8□□□□□ -1.96
NPAS2Q99743 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.8□□□□□ -1.96
NPAS2Q99743 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.8□□□□□ -1.96
NPAS2Q99743 MTCYBP17-201ENST00000503579 789 ntBASIC2.8□□□□□ -1.96
NPAS2Q99743 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
NPAS2Q99743 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.8□□□□□ -1.96
NPAS2Q99743 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.8□□□□□ -1.96
NPAS2Q99743 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.8□□□□□ -1.96
NPAS2Q99743 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.8□□□□□ -1.96
NPAS2Q99743 AC118942.1-201ENST00000529674 1035 ntBASIC2.8□□□□□ -1.96
NPAS2Q99743 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.8□□□□□ -1.96
NPAS2Q99743 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.8□□□□□ -1.96
NPAS2Q99743 AC007536.1-201ENST00000533382 349 ntBASIC2.8□□□□□ -1.96
NPAS2Q99743 HMGB1P6-201ENST00000569046 646 ntBASIC2.8□□□□□ -1.96
NPAS2Q99743 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.8□□□□□ -1.96
NPAS2Q99743 BNIP3P39-201ENST00000601077 554 ntBASIC2.8□□□□□ -1.96
NPAS2Q99743 AC096947.1-201ENST00000603233 470 ntBASIC2.8□□□□□ -1.96
NPAS2Q99743 AC006213.4-201ENST00000616184 634 ntBASIC2.8□□□□□ -1.96
NPAS2Q99743 Z99129.2-201ENST00000619967 314 ntBASIC2.8□□□□□ -1.96
NPAS2Q99743 MIR6852-201ENST00000621699 66 ntBASIC2.8□□□□□ -1.96
NPAS2Q99743 AL445264.1-201ENST00000621719 171 ntBASIC2.8□□□□□ -1.96
NPAS2Q99743 AC005858.4-201ENST00000623191 700 ntBASIC2.8□□□□□ -1.96
NPAS2Q99743 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.8□□□□□ -1.96
NPAS2Q99743 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
NPAS2Q99743 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.8□□□□□ -1.96
NPAS2Q99743 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
NPAS2Q99743 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
NPAS2Q99743 AL355596.1-201ENST00000565399 3996 ntBASIC2.8□□□□□ -1.96
NPAS2Q99743 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.8□□□□□ -1.96
NPAS2Q99743 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.79□□□□□ -1.96
NPAS2Q99743 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
NPAS2Q99743 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
NPAS2Q99743 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
NPAS2Q99743 RNU6-198P-201ENST00000384258 104 ntBASIC2.79□□□□□ -1.96
NPAS2Q99743 MIR122-201ENST00000385044 85 ntBASIC2.79□□□□□ -1.96
NPAS2Q99743 AL590084.1-201ENST00000407885 387 ntBASIC2.79□□□□□ -1.96
NPAS2Q99743 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.79□□□□□ -1.96
NPAS2Q99743 COTL1P1-201ENST00000422309 375 ntBASIC2.79□□□□□ -1.96
NPAS2Q99743 AC013410.2-201ENST00000422627 201 ntBASIC2.79□□□□□ -1.96
NPAS2Q99743 PPP1R11P2-201ENST00000423543 382 ntBASIC2.79□□□□□ -1.96
NPAS2Q99743 HSFY7P-201ENST00000432672 318 ntBASIC2.79□□□□□ -1.96
NPAS2Q99743 HSFY8P-201ENST00000437934 318 ntBASIC2.79□□□□□ -1.96
NPAS2Q99743 LSM1P1-201ENST00000438629 273 ntBASIC2.79□□□□□ -1.96
NPAS2Q99743 AC107083.1-201ENST00000439643 279 ntBASIC2.79□□□□□ -1.96
NPAS2Q99743 AC025750.2-201ENST00000442609 450 ntBASIC2.79□□□□□ -1.96
NPAS2Q99743 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.79□□□□□ -1.96
NPAS2Q99743 MTCO2P25-201ENST00000447065 681 ntBASIC2.79□□□□□ -1.96
NPAS2Q99743 RPL37P4-201ENST00000448908 268 ntBASIC2.79□□□□□ -1.96
NPAS2Q99743 GSTA11P-201ENST00000452866 669 ntBASIC2.79□□□□□ -1.96
NPAS2Q99743 HSFY5P-201ENST00000453726 309 ntBASIC2.79□□□□□ -1.96
NPAS2Q99743 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.79□□□□□ -1.96
NPAS2Q99743 snoU13.8-201ENST00000458890 104 ntBASIC2.79□□□□□ -1.96
NPAS2Q99743 RPL23AP11-201ENST00000475260 469 ntBASIC2.79□□□□□ -1.96
NPAS2Q99743 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
NPAS2Q99743 OR2A20P-203ENST00000498397 1268 ntBASIC2.79□□□□□ -1.96
NPAS2Q99743 AC097462.2-201ENST00000504623 481 ntBASIC2.79□□□□□ -1.96
NPAS2Q99743 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.79□□□□□ -1.96
NPAS2Q99743 XKRY-201ENST00000510392 1100 ntBASIC2.79□□□□□ -1.96
NPAS2Q99743 SCARNA15.2-201ENST00000516409 127 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms