Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 MTCO3P2-201ENST00000457365 171 ntBASIC2.56□□□□□ -2
CDX2Q99626 RN7SL75P-201ENST00000461926 281 ntBASIC2.56□□□□□ -2
CDX2Q99626 HMGB1P25-201ENST00000468402 607 ntBASIC2.56□□□□□ -2
CDX2Q99626 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.56□□□□□ -2
CDX2Q99626 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC2.56□□□□□ -2
CDX2Q99626 AC104090.1-201ENST00000506341 1171 ntBASIC2.56□□□□□ -2
CDX2Q99626 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.56□□□□□ -2
CDX2Q99626 AC112198.4-201ENST00000515450 351 ntBASIC2.56□□□□□ -2
CDX2Q99626 RN7SKP43-201ENST00000516173 320 ntBASIC2.56□□□□□ -2
CDX2Q99626 SNORA31.20-201ENST00000517111 133 ntBASIC2.56□□□□□ -2
CDX2Q99626 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.56□□□□□ -2
CDX2Q99626 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.56□□□□□ -2
CDX2Q99626 AP003066.2-201ENST00000529375 555 ntBASIC2.56□□□□□ -2
CDX2Q99626 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.56□□□□□ -2
CDX2Q99626 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.56□□□□□ -2
CDX2Q99626 AL670379.6-201ENST00000603753 252 ntBASIC2.56□□□□□ -2
CDX2Q99626 AL670379.11-201ENST00000604059 253 ntBASIC2.56□□□□□ -2
CDX2Q99626 AL670379.10-201ENST00000604330 253 ntBASIC2.56□□□□□ -2
CDX2Q99626 AC008162.1-201ENST00000604718 254 ntBASIC2.56□□□□□ -2
CDX2Q99626 AL670379.1-201ENST00000604752 252 ntBASIC2.56□□□□□ -2
CDX2Q99626 AL670379.2-201ENST00000604983 252 ntBASIC2.56□□□□□ -2
CDX2Q99626 AL670379.5-201ENST00000605253 252 ntBASIC2.56□□□□□ -2
CDX2Q99626 AL670379.4-201ENST00000605279 254 ntBASIC2.56□□□□□ -2
CDX2Q99626 AL670379.12-201ENST00000605291 253 ntBASIC2.56□□□□□ -2
CDX2Q99626 AL670379.8-201ENST00000605353 252 ntBASIC2.56□□□□□ -2
CDX2Q99626 AL670379.9-201ENST00000605428 253 ntBASIC2.56□□□□□ -2
CDX2Q99626 AL670379.7-201ENST00000605823 252 ntBASIC2.56□□□□□ -2
CDX2Q99626 AC005014.3-201ENST00000605985 190 ntBASIC2.56□□□□□ -2
CDX2Q99626 AC091046.2-201ENST00000620775 665 ntBASIC2.56□□□□□ -2
CDX2Q99626 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.56□□□□□ -2
CDX2Q99626 AC090897.3-201ENST00000636973 1157 ntBASIC2.56□□□□□ -2
CDX2Q99626 SUCLA2P2-201ENST00000417269 1309 ntBASIC2.56□□□□□ -2
CDX2Q99626 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.56□□□□□ -2
CDX2Q99626 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.56□□□□□ -2
CDX2Q99626 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CDX2Q99626 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.55□□□□□ -2
CDX2Q99626 RNA5SP258-201ENST00000362750 119 ntBASIC2.55□□□□□ -2
CDX2Q99626 RNU5B-4P-201ENST00000363508 111 ntBASIC2.55□□□□□ -2
CDX2Q99626 SNORA25.9-201ENST00000365087 128 ntBASIC2.55□□□□□ -2
CDX2Q99626 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.55□□□□□ -2
CDX2Q99626 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
CDX2Q99626 MT-TC-201ENST00000387405 66 ntBASIC2.55□□□□□ -2
CDX2Q99626 U3.29-201ENST00000391296 212 ntBASIC2.55□□□□□ -2
CDX2Q99626 MCTS2P-201ENST00000394552 546 ntBASIC2.55□□□□□ -2
CDX2Q99626 AL121972.1-201ENST00000402023 252 ntBASIC2.55□□□□□ -2
CDX2Q99626 AL355615.1-201ENST00000406187 641 ntBASIC2.55□□□□□ -2
CDX2Q99626 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.55□□□□□ -2
CDX2Q99626 RN7SKP123-201ENST00000410732 291 ntBASIC2.55□□□□□ -2
CDX2Q99626 RNU6-321P-201ENST00000410912 106 ntBASIC2.55□□□□□ -2
CDX2Q99626 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.55□□□□□ -2
CDX2Q99626 AC092634.6-201ENST00000418558 192 ntBASIC2.55□□□□□ -2
CDX2Q99626 OR2AS1P-201ENST00000427827 319 ntBASIC2.55□□□□□ -2
CDX2Q99626 MTCYBP32-201ENST00000427945 1084 ntBASIC2.55□□□□□ -2
CDX2Q99626 MTCYBP15-201ENST00000433123 1127 ntBASIC2.55□□□□□ -2
CDX2Q99626 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.55□□□□□ -2
CDX2Q99626 RPS29P6-201ENST00000438196 145 ntBASIC2.55□□□□□ -2
CDX2Q99626 ARF4P4-201ENST00000439608 520 ntBASIC2.55□□□□□ -2
CDX2Q99626 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.55□□□□□ -2
CDX2Q99626 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.55□□□□□ -2
CDX2Q99626 snoU13.18-201ENST00000459483 104 ntBASIC2.55□□□□□ -2
CDX2Q99626 AC104472.2-201ENST00000469035 601 ntBASIC2.55□□□□□ -2
CDX2Q99626 AC092902.1-201ENST00000486999 259 ntBASIC2.55□□□□□ -2
CDX2Q99626 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.55□□□□□ -2
CDX2Q99626 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
CDX2Q99626 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.55□□□□□ -2
CDX2Q99626 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.55□□□□□ -2
CDX2Q99626 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.55□□□□□ -2
CDX2Q99626 ZNF705CP-201ENST00000530515 889 ntBASIC2.55□□□□□ -2
CDX2Q99626 AC007536.1-201ENST00000533382 349 ntBASIC2.55□□□□□ -2
CDX2Q99626 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.55□□□□□ -2
CDX2Q99626 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.55□□□□□ -2
CDX2Q99626 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.55□□□□□ -2
CDX2Q99626 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.55□□□□□ -2
CDX2Q99626 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.55□□□□□ -2
CDX2Q99626 AC131902.3-201ENST00000611767 581 ntBASIC2.55□□□□□ -2
CDX2Q99626 AL020991.1-201ENST00000612314 373 ntBASIC2.55□□□□□ -2
CDX2Q99626 AC073968.1-201ENST00000618594 637 ntBASIC2.55□□□□□ -2
CDX2Q99626 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.55□□□□□ -2
CDX2Q99626 AC009318.4-201ENST00000620496 486 ntBASIC2.55□□□□□ -2
CDX2Q99626 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.54□□□□□ -2
CDX2Q99626 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.54□□□□□ -2
CDX2Q99626 MTND5P29-201ENST00000458676 1807 ntBASIC2.54□□□□□ -2
CDX2Q99626 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.54□□□□□ -2
CDX2Q99626 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.54□□□□□ -2
CDX2Q99626 AC111188.2-201ENST00000529697 1387 ntBASIC2.54□□□□□ -2
CDX2Q99626 AC092881.1-201ENST00000638218 2733 ntBASIC2.54□□□□□ -2
CDX2Q99626 SNORA51.4-201ENST00000364993 124 ntBASIC2.54□□□□□ -2
CDX2Q99626 RNA5SP88-201ENST00000365560 109 ntBASIC2.54□□□□□ -2
CDX2Q99626 U8.9-201ENST00000365667 134 ntBASIC2.54□□□□□ -2
CDX2Q99626 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.54□□□□□ -2
CDX2Q99626 SNORA67.3-201ENST00000384366 140 ntBASIC2.54□□□□□ -2
CDX2Q99626 RNU6-821P-201ENST00000390995 107 ntBASIC2.54□□□□□ -2
CDX2Q99626 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
CDX2Q99626 AL590084.1-201ENST00000407885 387 ntBASIC2.54□□□□□ -2
CDX2Q99626 AL133384.1-201ENST00000412744 351 ntBASIC2.54□□□□□ -2
CDX2Q99626 LUZP4P1-201ENST00000415420 344 ntBASIC2.54□□□□□ -2
CDX2Q99626 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.54□□□□□ -2
CDX2Q99626 AC233728.2-201ENST00000425348 757 ntBASIC2.54□□□□□ -2
CDX2Q99626 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC2.54□□□□□ -2
CDX2Q99626 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms