Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.88□□□□□ -1.79
SNX18Q96RF0 CBX3P7-201ENST00000532876 502 ntBASIC3.88□□□□□ -1.79
SNX18Q96RF0 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.88□□□□□ -1.79
SNX18Q96RF0 TOMM20P2-201ENST00000540082 421 ntBASIC3.88□□□□□ -1.79
SNX18Q96RF0 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.88□□□□□ -1.79
SNX18Q96RF0 AC123904.3-201ENST00000547218 814 ntBASIC3.88□□□□□ -1.79
SNX18Q96RF0 AC084783.1-201ENST00000565846 910 ntBASIC3.88□□□□□ -1.79
SNX18Q96RF0 AC023575.1-201ENST00000580510 358 ntBASIC3.88□□□□□ -1.79
SNX18Q96RF0 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.88□□□□□ -1.79
SNX18Q96RF0 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.88□□□□□ -1.79
SNX18Q96RF0 IGHV3-29-201ENST00000604817 344 ntBASIC3.88□□□□□ -1.79
SNX18Q96RF0 AC103710.2-201ENST00000609912 942 ntBASIC3.88□□□□□ -1.79
SNX18Q96RF0 TUG1_1.1-201ENST00000610654 145 ntBASIC3.88□□□□□ -1.79
SNX18Q96RF0 DISC2.1-201ENST00000612827 205 ntBASIC3.88□□□□□ -1.79
SNX18Q96RF0 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.88□□□□□ -1.79
SNX18Q96RF0 AL161637.1-201ENST00000622380 412 ntBASIC3.88□□□□□ -1.79
SNX18Q96RF0 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.88□□□□□ -1.79
SNX18Q96RF0 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.88□□□□□ -1.79
SNX18Q96RF0 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SNX18Q96RF0 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
SNX18Q96RF0 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SNX18Q96RF0 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SNX18Q96RF0 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
SNX18Q96RF0 RAD17P1-201ENST00000418130 2042 ntBASIC3.87□□□□□ -1.79
SNX18Q96RF0 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
SNX18Q96RF0 OR5P1P-201ENST00000299512 925 ntBASIC3.87□□□□□ -1.79
SNX18Q96RF0 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.87□□□□□ -1.79
SNX18Q96RF0 Y_RNA.11-201ENST00000362375 109 ntBASIC3.87□□□□□ -1.79
SNX18Q96RF0 RNU6-1249P-201ENST00000363237 111 ntBASIC3.87□□□□□ -1.79
SNX18Q96RF0 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.87□□□□□ -1.79
SNX18Q96RF0 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.87□□□□□ -1.79
SNX18Q96RF0 RNU6-432P-201ENST00000384196 109 ntBASIC3.87□□□□□ -1.79
SNX18Q96RF0 SNORD66.1-201ENST00000391230 76 ntBASIC3.87□□□□□ -1.79
SNX18Q96RF0 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SNX18Q96RF0 AL356967.1-201ENST00000406305 431 ntBASIC3.87□□□□□ -1.79
SNX18Q96RF0 SNORA11F-201ENST00000408237 128 ntBASIC3.87□□□□□ -1.79
SNX18Q96RF0 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.87□□□□□ -1.79
SNX18Q96RF0 FTH1P6-201ENST00000430768 320 ntBASIC3.87□□□□□ -1.79
SNX18Q96RF0 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.87□□□□□ -1.79
SNX18Q96RF0 PPIAP3-201ENST00000450588 505 ntBASIC3.87□□□□□ -1.79
SNX18Q96RF0 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.87□□□□□ -1.79
SNX18Q96RF0 CACYBPP2-201ENST00000453625 678 ntBASIC3.87□□□□□ -1.79
SNX18Q96RF0 AC006512.1-201ENST00000468816 291 ntBASIC3.87□□□□□ -1.79
SNX18Q96RF0 RPL21P126-201ENST00000470049 478 ntBASIC3.87□□□□□ -1.79
SNX18Q96RF0 AC109327.1-201ENST00000471666 403 ntBASIC3.87□□□□□ -1.79
SNX18Q96RF0 AC069499.1-201ENST00000489433 509 ntBASIC3.87□□□□□ -1.79
SNX18Q96RF0 RPL39P36-201ENST00000490784 156 ntBASIC3.87□□□□□ -1.79
SNX18Q96RF0 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.87□□□□□ -1.79
SNX18Q96RF0 AC104164.2-201ENST00000496953 495 ntBASIC3.87□□□□□ -1.79
SNX18Q96RF0 AC108145.1-201ENST00000503770 153 ntBASIC3.87□□□□□ -1.79
SNX18Q96RF0 PCBP2P3-201ENST00000509726 843 ntBASIC3.87□□□□□ -1.79
SNX18Q96RF0 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.87□□□□□ -1.79
SNX18Q96RF0 RN7SKP122-201ENST00000515923 296 ntBASIC3.87□□□□□ -1.79
SNX18Q96RF0 AC011979.2-201ENST00000527568 352 ntBASIC3.87□□□□□ -1.79
SNX18Q96RF0 AC006064.5-201ENST00000541782 248 ntBASIC3.87□□□□□ -1.79
SNX18Q96RF0 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.87□□□□□ -1.79
SNX18Q96RF0 AL133153.1-201ENST00000557756 303 ntBASIC3.87□□□□□ -1.79
SNX18Q96RF0 RPL21P12-201ENST00000559810 515 ntBASIC3.87□□□□□ -1.79
SNX18Q96RF0 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.87□□□□□ -1.79
SNX18Q96RF0 AC055876.1-202ENST00000567053 138 ntBASIC3.87□□□□□ -1.79
SNX18Q96RF0 OR4K8P-201ENST00000578842 1048 ntBASIC3.87□□□□□ -1.79
SNX18Q96RF0 AC015917.1-201ENST00000579654 510 ntBASIC3.87□□□□□ -1.79
SNX18Q96RF0 AC105224.1-201ENST00000587055 421 ntBASIC3.87□□□□□ -1.79
SNX18Q96RF0 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.87□□□□□ -1.79
SNX18Q96RF0 AL021997.2-201ENST00000615674 271 ntBASIC3.87□□□□□ -1.79
SNX18Q96RF0 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.87□□□□□ -1.79
SNX18Q96RF0 MIR7702-201ENST00000621931 59 ntBASIC3.87□□□□□ -1.79
SNX18Q96RF0 AC093648.1-201ENST00000623546 606 ntBASIC3.87□□□□□ -1.79
SNX18Q96RF0 AC138649.5-201ENST00000637456 137 ntBASIC3.87□□□□□ -1.79
SNX18Q96RF0 AC022893.2-201ENST00000564832 3296 ntBASIC3.87□□□□□ -1.79
SNX18Q96RF0 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.87□□□□□ -1.79
SNX18Q96RF0 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
SNX18Q96RF0 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SNX18Q96RF0 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
SNX18Q96RF0 MAPK10-373ENST00000641983 6772 ntBASIC3.87□□□□□ -1.79
SNX18Q96RF0 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
SNX18Q96RF0 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SNX18Q96RF0 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SNX18Q96RF0 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.86□□□□□ -1.79
SNX18Q96RF0 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SNX18Q96RF0 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.86□□□□□ -1.79
SNX18Q96RF0 AC092326.2-201ENST00000624772 1561 ntBASIC3.86□□□□□ -1.79
SNX18Q96RF0 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SNX18Q96RF0 Y_RNA.813-201ENST00000364639 102 ntBASIC3.86□□□□□ -1.79
SNX18Q96RF0 Y_RNA.367-201ENST00000365544 101 ntBASIC3.86□□□□□ -1.79
SNX18Q96RF0 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
SNX18Q96RF0 RNU6-837P-201ENST00000391056 108 ntBASIC3.86□□□□□ -1.79
SNX18Q96RF0 RNA5SP118-201ENST00000410385 109 ntBASIC3.86□□□□□ -1.79
SNX18Q96RF0 AL161631.1-201ENST00000417933 486 ntBASIC3.86□□□□□ -1.79
SNX18Q96RF0 RPS12P23-201ENST00000419579 400 ntBASIC3.86□□□□□ -1.79
SNX18Q96RF0 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.86□□□□□ -1.79
SNX18Q96RF0 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.86□□□□□ -1.79
SNX18Q96RF0 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.86□□□□□ -1.79
SNX18Q96RF0 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.86□□□□□ -1.79
SNX18Q96RF0 ATP5JP1-201ENST00000431631 322 ntBASIC3.86□□□□□ -1.79
SNX18Q96RF0 RPS20P5-201ENST00000434808 360 ntBASIC3.86□□□□□ -1.79
SNX18Q96RF0 RPL35AP22-201ENST00000436855 335 ntBASIC3.86□□□□□ -1.79
SNX18Q96RF0 AC093019.1-201ENST00000443135 252 ntBASIC3.86□□□□□ -1.79
SNX18Q96RF0 AC006480.1-201ENST00000449887 378 ntBASIC3.86□□□□□ -1.79
SNX18Q96RF0 ELOCP23-201ENST00000452014 332 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms