Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC1.18□□□□□ -2.22
ALMS1Q8TCU4 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC1.18□□□□□ -2.22
ALMS1Q8TCU4 HMGN2P21-201ENST00000447764 270 ntBASIC1.18□□□□□ -2.22
ALMS1Q8TCU4 AC146507.1-201ENST00000468335 354 ntBASIC1.18□□□□□ -2.22
ALMS1Q8TCU4 RPL23AP55-201ENST00000498163 452 ntBASIC1.18□□□□□ -2.22
ALMS1Q8TCU4 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC1.18□□□□□ -2.22
ALMS1Q8TCU4 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
ALMS1Q8TCU4 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
ALMS1Q8TCU4 UBE2FP3-201ENST00000436366 524 ntBASIC1.18□□□□□ -2.22
ALMS1Q8TCU4 RN7SKP234-201ENST00000517173 224 ntBASIC1.18□□□□□ -2.22
ALMS1Q8TCU4 AC121761.2-201ENST00000617300 689 ntBASIC1.18□□□□□ -2.22
ALMS1Q8TCU4 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
ALMS1Q8TCU4 AC099654.7-201ENST00000635788 2127 ntBASIC1.18□□□□□ -2.22
ALMS1Q8TCU4 AC096632.1-201ENST00000427395 310 ntBASIC1.18□□□□□ -2.22
ALMS1Q8TCU4 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC1.18□□□□□ -2.22
ALMS1Q8TCU4 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
ALMS1Q8TCU4 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.18□□□□□ -2.22
ALMS1Q8TCU4 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.18□□□□□ -2.22
ALMS1Q8TCU4 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.18□□□□□ -2.22
ALMS1Q8TCU4 AC006249.1-201ENST00000621223 471 ntBASIC1.18□□□□□ -2.22
ALMS1Q8TCU4 AC006065.5-201ENST00000623427 349 ntBASIC1.18□□□□□ -2.22
ALMS1Q8TCU4 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.18□□□□□ -2.22
ALMS1Q8TCU4 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
ALMS1Q8TCU4 RNY1-201ENST00000364228 113 ntBASIC1.18□□□□□ -2.22
ALMS1Q8TCU4 AL121972.1-201ENST00000402023 252 ntBASIC1.18□□□□□ -2.22
ALMS1Q8TCU4 TOMM22P1-201ENST00000418578 312 ntBASIC1.18□□□□□ -2.22
ALMS1Q8TCU4 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.18□□□□□ -2.22
ALMS1Q8TCU4 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.18□□□□□ -2.22
ALMS1Q8TCU4 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
ALMS1Q8TCU4 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC1.18□□□□□ -2.22
ALMS1Q8TCU4 AL590664.1-201ENST00000448065 339 ntBASIC1.17□□□□□ -2.22
ALMS1Q8TCU4 Z99714.1-201ENST00000450463 807 ntBASIC1.17□□□□□ -2.22
ALMS1Q8TCU4 RBM43P1-201ENST00000476891 1081 ntBASIC1.17□□□□□ -2.22
ALMS1Q8TCU4 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.17□□□□□ -2.22
ALMS1Q8TCU4 MIR3690-201ENST00000580266 75 ntBASIC1.17□□□□□ -2.22
ALMS1Q8TCU4 MIR5194-201ENST00000582634 120 ntBASIC1.17□□□□□ -2.22
ALMS1Q8TCU4 SNORA7.2-201ENST00000364446 145 ntBASIC1.17□□□□□ -2.22
ALMS1Q8TCU4 RNA5SP160-201ENST00000364866 120 ntBASIC1.17□□□□□ -2.22
ALMS1Q8TCU4 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.17□□□□□ -2.22
ALMS1Q8TCU4 RPL17P12-201ENST00000413391 526 ntBASIC1.17□□□□□ -2.22
ALMS1Q8TCU4 SSXP9-201ENST00000417503 292 ntBASIC1.17□□□□□ -2.22
ALMS1Q8TCU4 HMGB1P27-201ENST00000431429 603 ntBASIC1.17□□□□□ -2.22
ALMS1Q8TCU4 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.17□□□□□ -2.22
ALMS1Q8TCU4 AC244505.5-201ENST00000443639 207 ntBASIC1.17□□□□□ -2.22
ALMS1Q8TCU4 RPS15AP17-201ENST00000470598 390 ntBASIC1.17□□□□□ -2.22
ALMS1Q8TCU4 OR6C73P-201ENST00000546432 358 ntBASIC1.17□□□□□ -2.22
ALMS1Q8TCU4 VN1R74P-201ENST00000613259 503 ntBASIC1.17□□□□□ -2.22
ALMS1Q8TCU4 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC1.17□□□□□ -2.22
ALMS1Q8TCU4 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.17□□□□□ -2.22
ALMS1Q8TCU4 RNU6-50P-201ENST00000362356 103 ntBASIC1.17□□□□□ -2.22
ALMS1Q8TCU4 ARPC3P1-201ENST00000437218 533 ntBASIC1.17□□□□□ -2.22
ALMS1Q8TCU4 RPS4XP11-201ENST00000446897 772 ntBASIC1.17□□□□□ -2.22
ALMS1Q8TCU4 AC113155.1-201ENST00000511141 769 ntBASIC1.17□□□□□ -2.22
ALMS1Q8TCU4 NBEAP1-201ENST00000554452 979 ntBASIC1.17□□□□□ -2.22
ALMS1Q8TCU4 AL049838.1-201ENST00000563647 981 ntBASIC1.17□□□□□ -2.22
ALMS1Q8TCU4 AC103987.3-201ENST00000582071 292 ntBASIC1.17□□□□□ -2.22
ALMS1Q8TCU4 AC009220.3-201ENST00000604318 586 ntBASIC1.17□□□□□ -2.22
ALMS1Q8TCU4 AC012493.3-201ENST00000604494 112 ntBASIC1.17□□□□□ -2.22
ALMS1Q8TCU4 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC1.17□□□□□ -2.22
ALMS1Q8TCU4 AC022022.1-201ENST00000430304 178 ntBASIC1.16□□□□□ -2.22
ALMS1Q8TCU4 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC1.16□□□□□ -2.22
ALMS1Q8TCU4 AC107393.1-201ENST00000512403 346 ntBASIC1.16□□□□□ -2.22
ALMS1Q8TCU4 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC1.16□□□□□ -2.22
ALMS1Q8TCU4 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC1.16□□□□□ -2.22
ALMS1Q8TCU4 CENPCP1-201ENST00000533085 2578 ntBASIC1.16□□□□□ -2.22
ALMS1Q8TCU4 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.16□□□□□ -2.22
ALMS1Q8TCU4 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC1.16□□□□□ -2.22
ALMS1Q8TCU4 RPL21P103-201ENST00000479921 488 ntBASIC1.16□□□□□ -2.22
ALMS1Q8TCU4 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.16□□□□□ -2.22
ALMS1Q8TCU4 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.16□□□□□ -2.22
ALMS1Q8TCU4 AC022079.2-201ENST00000619739 566 ntBASIC1.16□□□□□ -2.22
ALMS1Q8TCU4 AL133216.2-202ENST00000634512 349 ntBASIC1.16□□□□□ -2.22
ALMS1Q8TCU4 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
ALMS1Q8TCU4 RNU6-1180P-201ENST00000364935 107 ntBASIC1.16□□□□□ -2.22
ALMS1Q8TCU4 AL023807.1-201ENST00000407932 359 ntBASIC1.16□□□□□ -2.22
ALMS1Q8TCU4 AL136133.1-201ENST00000413694 376 ntBASIC1.16□□□□□ -2.22
ALMS1Q8TCU4 USP9YP10-201ENST00000454868 628 ntBASIC1.16□□□□□ -2.22
ALMS1Q8TCU4 AC025033.1-201ENST00000463883 194 ntBASIC1.16□□□□□ -2.22
ALMS1Q8TCU4 KLRA1P-201ENST00000503499 986 ntBASIC1.16□□□□□ -2.22
ALMS1Q8TCU4 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.16□□□□□ -2.22
ALMS1Q8TCU4 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
ALMS1Q8TCU4 Z82195.2-201ENST00000612348 18351 ntBASIC1.16□□□□□ -2.22
ALMS1Q8TCU4 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC1.16□□□□□ -2.22
ALMS1Q8TCU4 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
ALMS1Q8TCU4 CCNB2P1-201ENST00000399411 1150 ntBASIC1.15□□□□□ -2.22
ALMS1Q8TCU4 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.15□□□□□ -2.22
ALMS1Q8TCU4 AC069277.2-201ENST00000454211 432 ntBASIC1.15□□□□□ -2.22
ALMS1Q8TCU4 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.15□□□□□ -2.22
ALMS1Q8TCU4 MIR4452-201ENST00000583004 71 ntBASIC1.15□□□□□ -2.22
ALMS1Q8TCU4 MIR6840-201ENST00000611937 71 ntBASIC1.15□□□□□ -2.22
ALMS1Q8TCU4 MTND5P3-201ENST00000438536 1800 ntBASIC1.15□□□□□ -2.22
ALMS1Q8TCU4 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.15□□□□□ -2.22
ALMS1Q8TCU4 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
ALMS1Q8TCU4 MTCO3P30-201ENST00000426425 670 ntBASIC1.15□□□□□ -2.23
ALMS1Q8TCU4 XKRY2-201ENST00000442362 1093 ntBASIC1.15□□□□□ -2.23
ALMS1Q8TCU4 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.15□□□□□ -2.23
ALMS1Q8TCU4 OR7L1P-201ENST00000456181 380 ntBASIC1.15□□□□□ -2.23
ALMS1Q8TCU4 CDC42P4-201ENST00000510507 563 ntBASIC1.15□□□□□ -2.23
ALMS1Q8TCU4 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.15□□□□□ -2.23
ALMS1Q8TCU4 SNORA25.15-201ENST00000516487 89 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms