Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SHKBP1Q8TBC3 AC134882.1-201ENST00000603738 1676 ntBASIC5.08□□□□□ -1.6
SHKBP1Q8TBC3 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.08□□□□□ -1.6
SHKBP1Q8TBC3 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SHKBP1Q8TBC3 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SHKBP1Q8TBC3 AC063976.2-201ENST00000425667 3556 ntBASIC5.08□□□□□ -1.6
SHKBP1Q8TBC3 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
SHKBP1Q8TBC3 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SHKBP1Q8TBC3 RNU6-95P-201ENST00000384697 107 ntBASIC5.08□□□□□ -1.6
SHKBP1Q8TBC3 RNU6-278P-201ENST00000390945 109 ntBASIC5.08□□□□□ -1.6
SHKBP1Q8TBC3 OR2AH1P-201ENST00000425717 928 ntBASIC5.08□□□□□ -1.6
SHKBP1Q8TBC3 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.08□□□□□ -1.6
SHKBP1Q8TBC3 AC092017.2-201ENST00000427600 362 ntBASIC5.08□□□□□ -1.6
SHKBP1Q8TBC3 USP9YP30-201ENST00000430729 455 ntBASIC5.08□□□□□ -1.6
SHKBP1Q8TBC3 RPL36P19-201ENST00000430744 301 ntBASIC5.08□□□□□ -1.6
SHKBP1Q8TBC3 AC091390.1-201ENST00000433904 331 ntBASIC5.08□□□□□ -1.6
SHKBP1Q8TBC3 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.08□□□□□ -1.6
SHKBP1Q8TBC3 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.08□□□□□ -1.6
SHKBP1Q8TBC3 RPS5P7-201ENST00000456664 608 ntBASIC5.08□□□□□ -1.6
SHKBP1Q8TBC3 snoU13.1-201ENST00000459157 104 ntBASIC5.08□□□□□ -1.6
SHKBP1Q8TBC3 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.08□□□□□ -1.6
SHKBP1Q8TBC3 TBCAP3-201ENST00000512475 312 ntBASIC5.08□□□□□ -1.6
SHKBP1Q8TBC3 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.08□□□□□ -1.6
SHKBP1Q8TBC3 ENPP7P9-201ENST00000514456 627 ntBASIC5.08□□□□□ -1.6
SHKBP1Q8TBC3 AC093853.1-201ENST00000515689 483 ntBASIC5.08□□□□□ -1.6
SHKBP1Q8TBC3 RNU6-307P-201ENST00000516743 106 ntBASIC5.08□□□□□ -1.6
SHKBP1Q8TBC3 IGKV2D-23-201ENST00000518179 286 ntBASIC5.08□□□□□ -1.6
SHKBP1Q8TBC3 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.08□□□□□ -1.6
SHKBP1Q8TBC3 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC5.08□□□□□ -1.6
SHKBP1Q8TBC3 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.08□□□□□ -1.6
SHKBP1Q8TBC3 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.08□□□□□ -1.6
SHKBP1Q8TBC3 MIR3941-201ENST00000582572 103 ntBASIC5.08□□□□□ -1.6
SHKBP1Q8TBC3 AC009779.6-201ENST00000603972 165 ntBASIC5.08□□□□□ -1.6
SHKBP1Q8TBC3 FAM27B-201ENST00000610601 213 ntBASIC5.08□□□□□ -1.6
SHKBP1Q8TBC3 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SHKBP1Q8TBC3 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
SHKBP1Q8TBC3 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.08□□□□□ -1.6
SHKBP1Q8TBC3 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SHKBP1Q8TBC3 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SHKBP1Q8TBC3 AL672167.1-205ENST00000641112 3080 ntBASIC5.08□□□□□ -1.6
SHKBP1Q8TBC3 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SHKBP1Q8TBC3 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
SHKBP1Q8TBC3 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC5.07□□□□□ -1.6
SHKBP1Q8TBC3 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SHKBP1Q8TBC3 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SHKBP1Q8TBC3 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.07□□□□□ -1.6
SHKBP1Q8TBC3 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.07□□□□□ -1.6
SHKBP1Q8TBC3 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SHKBP1Q8TBC3 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.07□□□□□ -1.6
SHKBP1Q8TBC3 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SHKBP1Q8TBC3 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SHKBP1Q8TBC3 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SHKBP1Q8TBC3 Y_RNA.2-201ENST00000362330 96 ntBASIC5.07□□□□□ -1.6
SHKBP1Q8TBC3 Y_RNA.64-201ENST00000362845 102 ntBASIC5.07□□□□□ -1.6
SHKBP1Q8TBC3 RNU6-188P-201ENST00000364207 107 ntBASIC5.07□□□□□ -1.6
SHKBP1Q8TBC3 RNU6-662P-201ENST00000384253 104 ntBASIC5.07□□□□□ -1.6
SHKBP1Q8TBC3 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SHKBP1Q8TBC3 GNG5P5-201ENST00000420444 220 ntBASIC5.07□□□□□ -1.6
SHKBP1Q8TBC3 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC5.07□□□□□ -1.6
SHKBP1Q8TBC3 AL132765.1-201ENST00000434165 553 ntBASIC5.07□□□□□ -1.6
SHKBP1Q8TBC3 CYCSP24-201ENST00000445119 316 ntBASIC5.07□□□□□ -1.6
SHKBP1Q8TBC3 AC016696.1-201ENST00000446949 318 ntBASIC5.07□□□□□ -1.6
SHKBP1Q8TBC3 CEACAMP6-201ENST00000452007 574 ntBASIC5.07□□□□□ -1.6
SHKBP1Q8TBC3 AC133473.1-201ENST00000455173 299 ntBASIC5.07□□□□□ -1.6
SHKBP1Q8TBC3 RPL21P8-201ENST00000465083 535 ntBASIC5.07□□□□□ -1.6
SHKBP1Q8TBC3 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.07□□□□□ -1.6
SHKBP1Q8TBC3 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC5.07□□□□□ -1.6
SHKBP1Q8TBC3 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC5.07□□□□□ -1.6
SHKBP1Q8TBC3 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC5.07□□□□□ -1.6
SHKBP1Q8TBC3 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SHKBP1Q8TBC3 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.07□□□□□ -1.6
SHKBP1Q8TBC3 AC022868.1-201ENST00000517767 391 ntBASIC5.07□□□□□ -1.6
SHKBP1Q8TBC3 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.07□□□□□ -1.6
SHKBP1Q8TBC3 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.07□□□□□ -1.6
SHKBP1Q8TBC3 AC024224.1-201ENST00000538284 609 ntBASIC5.07□□□□□ -1.6
SHKBP1Q8TBC3 AC091516.1-201ENST00000549191 703 ntBASIC5.07□□□□□ -1.6
SHKBP1Q8TBC3 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.07□□□□□ -1.6
SHKBP1Q8TBC3 SUB1P3-201ENST00000564581 315 ntBASIC5.07□□□□□ -1.6
SHKBP1Q8TBC3 AC005899.2-201ENST00000584353 90 ntBASIC5.07□□□□□ -1.6
SHKBP1Q8TBC3 AC022726.1-201ENST00000587475 207 ntBASIC5.07□□□□□ -1.6
SHKBP1Q8TBC3 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SHKBP1Q8TBC3 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.07□□□□□ -1.6
SHKBP1Q8TBC3 MIR6758-201ENST00000620653 63 ntBASIC5.07□□□□□ -1.6
SHKBP1Q8TBC3 AP001642.1-201ENST00000624727 2117 ntBASIC5.07□□□□□ -1.6
SHKBP1Q8TBC3 MIR4272-201ENST00000635924 64 ntBASIC5.07□□□□□ -1.6
SHKBP1Q8TBC3 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SHKBP1Q8TBC3 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.07□□□□□ -1.6
SHKBP1Q8TBC3 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SHKBP1Q8TBC3 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SHKBP1Q8TBC3 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SHKBP1Q8TBC3 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SHKBP1Q8TBC3 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SHKBP1Q8TBC3 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SHKBP1Q8TBC3 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SHKBP1Q8TBC3 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
SHKBP1Q8TBC3 SALL4P2-201ENST00000423288 2910 ntBASIC5.06□□□□□ -1.6
SHKBP1Q8TBC3 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
SHKBP1Q8TBC3 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SHKBP1Q8TBC3 Y_RNA.20-201ENST00000362479 113 ntBASIC5.06□□□□□ -1.6
SHKBP1Q8TBC3 SNORD62.1-201ENST00000362541 86 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms