Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 snoU13.8-201ENST00000458890 104 ntBASIC2.58□□□□□ -2
LINC01006Q8NI28 RN7SL93P-201ENST00000463035 293 ntBASIC2.58□□□□□ -2
LINC01006Q8NI28 RPL23AP67-201ENST00000465341 474 ntBASIC2.58□□□□□ -2
LINC01006Q8NI28 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.58□□□□□ -2
LINC01006Q8NI28 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.58□□□□□ -2
LINC01006Q8NI28 AC017037.2-201ENST00000513850 890 ntBASIC2.58□□□□□ -2
LINC01006Q8NI28 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.58□□□□□ -2
LINC01006Q8NI28 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC2.58□□□□□ -2
LINC01006Q8NI28 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.58□□□□□ -2
LINC01006Q8NI28 AC126177.3-201ENST00000551839 688 ntBASIC2.58□□□□□ -2
LINC01006Q8NI28 NDUFAF4P1-201ENST00000559425 519 ntBASIC2.58□□□□□ -2
LINC01006Q8NI28 AC006362.1-201ENST00000567392 174 ntBASIC2.58□□□□□ -2
LINC01006Q8NI28 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.58□□□□□ -2
LINC01006Q8NI28 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.58□□□□□ -2
LINC01006Q8NI28 AC034268.2-201ENST00000571784 482 ntBASIC2.58□□□□□ -2
LINC01006Q8NI28 AC090615.1-201ENST00000577519 154 ntBASIC2.58□□□□□ -2
LINC01006Q8NI28 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC2.58□□□□□ -2
LINC01006Q8NI28 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.58□□□□□ -2
LINC01006Q8NI28 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.58□□□□□ -2
LINC01006Q8NI28 UBE2L4-201ENST00000587688 464 ntBASIC2.58□□□□□ -2
LINC01006Q8NI28 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.58□□□□□ -2
LINC01006Q8NI28 AC064872.1-201ENST00000604823 1072 ntBASIC2.58□□□□□ -2
LINC01006Q8NI28 AC128687.1-201ENST00000605304 619 ntBASIC2.58□□□□□ -2
LINC01006Q8NI28 AL157817.1-201ENST00000614264 790 ntBASIC2.58□□□□□ -2
LINC01006Q8NI28 Xist_exon1.1-201ENST00000618930 85 ntBASIC2.58□□□□□ -2
LINC01006Q8NI28 AC022149.2-201ENST00000621061 203 ntBASIC2.58□□□□□ -2
LINC01006Q8NI28 MIR6852-201ENST00000621699 66 ntBASIC2.58□□□□□ -2
LINC01006Q8NI28 AL158801.5-201ENST00000623123 465 ntBASIC2.58□□□□□ -2
LINC01006Q8NI28 AC139792.2-201ENST00000624218 587 ntBASIC2.58□□□□□ -2
LINC01006Q8NI28 AC006386.2-201ENST00000624491 75 ntBASIC2.58□□□□□ -2
LINC01006Q8NI28 AC012005.1-201ENST00000624575 75 ntBASIC2.58□□□□□ -2
LINC01006Q8NI28 AC025048.6-202ENST00000627667 438 ntBASIC2.58□□□□□ -2
LINC01006Q8NI28 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
LINC01006Q8NI28 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
LINC01006Q8NI28 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC2.58□□□□□ -2
LINC01006Q8NI28 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
LINC01006Q8NI28 MTND4P4-201ENST00000439033 1366 ntBASIC2.58□□□□□ -2
LINC01006Q8NI28 AC116096.1-201ENST00000566804 2314 ntBASIC2.58□□□□□ -2
LINC01006Q8NI28 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
LINC01006Q8NI28 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
LINC01006Q8NI28 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC2.57□□□□□ -2
LINC01006Q8NI28 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC2.57□□□□□ -2
LINC01006Q8NI28 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
LINC01006Q8NI28 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.57□□□□□ -2
LINC01006Q8NI28 AL513302.2-201ENST00000562313 1842 ntBASIC2.57□□□□□ -2
LINC01006Q8NI28 RNU1-18P-201ENST00000363062 164 ntBASIC2.57□□□□□ -2
LINC01006Q8NI28 SNORA51.2-201ENST00000364595 132 ntBASIC2.57□□□□□ -2
LINC01006Q8NI28 RNU4-75P-201ENST00000364621 146 ntBASIC2.57□□□□□ -2
LINC01006Q8NI28 RNU5E-5P-201ENST00000365379 116 ntBASIC2.57□□□□□ -2
LINC01006Q8NI28 RNU6-629P-201ENST00000384061 103 ntBASIC2.57□□□□□ -2
LINC01006Q8NI28 RNU6-533P-201ENST00000384144 107 ntBASIC2.57□□□□□ -2
LINC01006Q8NI28 MIR3074-201ENST00000384885 81 ntBASIC2.57□□□□□ -2
LINC01006Q8NI28 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.57□□□□□ -2
LINC01006Q8NI28 AL391417.1-201ENST00000404100 426 ntBASIC2.57□□□□□ -2
LINC01006Q8NI28 RNU6-712P-201ENST00000410558 100 ntBASIC2.57□□□□□ -2
LINC01006Q8NI28 RNU2-37P-201ENST00000410695 177 ntBASIC2.57□□□□□ -2
LINC01006Q8NI28 RHEBP3-201ENST00000411920 351 ntBASIC2.57□□□□□ -2
LINC01006Q8NI28 RPL17P12-201ENST00000413391 526 ntBASIC2.57□□□□□ -2
LINC01006Q8NI28 RPS7P13-201ENST00000413955 498 ntBASIC2.57□□□□□ -2
LINC01006Q8NI28 MORF4L1P6-201ENST00000418771 268 ntBASIC2.57□□□□□ -2
LINC01006Q8NI28 MTCO2P34-201ENST00000421994 607 ntBASIC2.57□□□□□ -2
LINC01006Q8NI28 AC006366.1-201ENST00000422002 759 ntBASIC2.57□□□□□ -2
LINC01006Q8NI28 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.57□□□□□ -2
LINC01006Q8NI28 AL356583.2-201ENST00000426536 280 ntBASIC2.57□□□□□ -2
LINC01006Q8NI28 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.57□□□□□ -2
LINC01006Q8NI28 DLGAP5P1-201ENST00000430307 464 ntBASIC2.57□□□□□ -2
LINC01006Q8NI28 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.57□□□□□ -2
LINC01006Q8NI28 AC109583.1-201ENST00000432156 268 ntBASIC2.57□□□□□ -2
LINC01006Q8NI28 AC236972.1-201ENST00000433225 199 ntBASIC2.57□□□□□ -2
LINC01006Q8NI28 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.57□□□□□ -2
LINC01006Q8NI28 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.57□□□□□ -2
LINC01006Q8NI28 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.57□□□□□ -2
LINC01006Q8NI28 AL022238.1-201ENST00000442557 355 ntBASIC2.57□□□□□ -2
LINC01006Q8NI28 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.57□□□□□ -2
LINC01006Q8NI28 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.57□□□□□ -2
LINC01006Q8NI28 USP9YP29-201ENST00000445112 563 ntBASIC2.57□□□□□ -2
LINC01006Q8NI28 NANOGNBP1-201ENST00000448444 480 ntBASIC2.57□□□□□ -2
LINC01006Q8NI28 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.57□□□□□ -2
LINC01006Q8NI28 Z82190.1-201ENST00000454534 490 ntBASIC2.57□□□□□ -2
LINC01006Q8NI28 AC104308.1-201ENST00000454621 333 ntBASIC2.57□□□□□ -2
LINC01006Q8NI28 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.57□□□□□ -2
LINC01006Q8NI28 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.57□□□□□ -2
LINC01006Q8NI28 RNU6-956P-201ENST00000458868 103 ntBASIC2.57□□□□□ -2
LINC01006Q8NI28 snoU109.4-201ENST00000458953 143 ntBASIC2.57□□□□□ -2
LINC01006Q8NI28 RN7SL863P-201ENST00000462370 296 ntBASIC2.57□□□□□ -2
LINC01006Q8NI28 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.57□□□□□ -2
LINC01006Q8NI28 RPS3AP50-201ENST00000487064 803 ntBASIC2.57□□□□□ -2
LINC01006Q8NI28 AC082651.2-201ENST00000496833 166 ntBASIC2.57□□□□□ -2
LINC01006Q8NI28 HMGB1P22-201ENST00000505315 124 ntBASIC2.57□□□□□ -2
LINC01006Q8NI28 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.57□□□□□ -2
LINC01006Q8NI28 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC2.57□□□□□ -2
LINC01006Q8NI28 MTND4LP18-201ENST00000526864 291 ntBASIC2.57□□□□□ -2
LINC01006Q8NI28 AP003497.1-201ENST00000528472 562 ntBASIC2.57□□□□□ -2
LINC01006Q8NI28 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.57□□□□□ -2
LINC01006Q8NI28 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.57□□□□□ -2
LINC01006Q8NI28 SETP7-201ENST00000552169 453 ntBASIC2.57□□□□□ -2
LINC01006Q8NI28 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.57□□□□□ -2
LINC01006Q8NI28 ZNF519P3-201ENST00000557158 1032 ntBASIC2.57□□□□□ -2
LINC01006Q8NI28 XIAPP1-201ENST00000603162 600 ntBASIC2.57□□□□□ -2
LINC01006Q8NI28 AC112187.2-201ENST00000604345 283 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms