Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
CPSF7Q8N684 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.38□□□□□ -1.87
CPSF7Q8N684 SCARNA13-201ENST00000516672 275 ntBASIC3.38□□□□□ -1.87
CPSF7Q8N684 RNU6-528P-201ENST00000516926 100 ntBASIC3.38□□□□□ -1.87
CPSF7Q8N684 RANP9-201ENST00000519957 271 ntBASIC3.38□□□□□ -1.87
CPSF7Q8N684 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.38□□□□□ -1.87
CPSF7Q8N684 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.38□□□□□ -1.87
CPSF7Q8N684 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.38□□□□□ -1.87
CPSF7Q8N684 AC018630.1-201ENST00000541376 925 ntBASIC3.38□□□□□ -1.87
CPSF7Q8N684 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.38□□□□□ -1.87
CPSF7Q8N684 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.38□□□□□ -1.87
CPSF7Q8N684 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.38□□□□□ -1.87
CPSF7Q8N684 AC087481.2-201ENST00000565492 330 ntBASIC3.38□□□□□ -1.87
CPSF7Q8N684 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.38□□□□□ -1.87
CPSF7Q8N684 MIR5697-201ENST00000578045 78 ntBASIC3.38□□□□□ -1.87
CPSF7Q8N684 OR4K8P-201ENST00000578842 1048 ntBASIC3.38□□□□□ -1.87
CPSF7Q8N684 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.38□□□□□ -1.87
CPSF7Q8N684 SNORD84-203ENST00000584275 78 ntBASIC3.38□□□□□ -1.87
CPSF7Q8N684 AC073544.2-201ENST00000601155 540 ntBASIC3.38□□□□□ -1.87
CPSF7Q8N684 AC079597.1-201ENST00000624306 508 ntBASIC3.38□□□□□ -1.87
CPSF7Q8N684 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CPSF7Q8N684 AC004925.1-201ENST00000624256 2706 ntBASIC3.38□□□□□ -1.87
CPSF7Q8N684 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.38□□□□□ -1.87
CPSF7Q8N684 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CPSF7Q8N684 MTND5P1-201ENST00000445440 1375 ntBASIC3.38□□□□□ -1.87
CPSF7Q8N684 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.37□□□□□ -1.87
CPSF7Q8N684 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.37□□□□□ -1.87
CPSF7Q8N684 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CPSF7Q8N684 AL021368.2-201ENST00000606125 5352 ntBASIC3.37□□□□□ -1.87
CPSF7Q8N684 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.37□□□□□ -1.87
CPSF7Q8N684 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CPSF7Q8N684 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CPSF7Q8N684 FRG1BP-201ENST00000278882 761 ntBASIC3.37□□□□□ -1.87
CPSF7Q8N684 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CPSF7Q8N684 Y_RNA.51-201ENST00000362725 102 ntBASIC3.37□□□□□ -1.87
CPSF7Q8N684 RNA5SP383-201ENST00000362934 120 ntBASIC3.37□□□□□ -1.87
CPSF7Q8N684 RNU6-1155P-201ENST00000363554 107 ntBASIC3.37□□□□□ -1.87
CPSF7Q8N684 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CPSF7Q8N684 RNU6-1074P-201ENST00000383995 104 ntBASIC3.37□□□□□ -1.87
CPSF7Q8N684 RNU6-533P-201ENST00000384144 107 ntBASIC3.37□□□□□ -1.87
CPSF7Q8N684 RNU6-114P-201ENST00000384704 105 ntBASIC3.37□□□□□ -1.87
CPSF7Q8N684 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.37□□□□□ -1.87
CPSF7Q8N684 AC016907.1-201ENST00000419483 435 ntBASIC3.37□□□□□ -1.87
CPSF7Q8N684 BEND7P1-201ENST00000422058 457 ntBASIC3.37□□□□□ -1.87
CPSF7Q8N684 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.37□□□□□ -1.87
CPSF7Q8N684 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.37□□□□□ -1.87
CPSF7Q8N684 RPL21P112-201ENST00000434403 463 ntBASIC3.37□□□□□ -1.87
CPSF7Q8N684 AC009969.1-201ENST00000438726 172 ntBASIC3.37□□□□□ -1.87
CPSF7Q8N684 THAP5P1-201ENST00000439089 262 ntBASIC3.37□□□□□ -1.87
CPSF7Q8N684 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.37□□□□□ -1.87
CPSF7Q8N684 AC234775.1-201ENST00000454247 670 ntBASIC3.37□□□□□ -1.87
CPSF7Q8N684 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.37□□□□□ -1.87
CPSF7Q8N684 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CPSF7Q8N684 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.37□□□□□ -1.87
CPSF7Q8N684 SNORA64.4-201ENST00000516632 81 ntBASIC3.37□□□□□ -1.87
CPSF7Q8N684 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.37□□□□□ -1.87
CPSF7Q8N684 AC007115.1-201ENST00000546853 234 ntBASIC3.37□□□□□ -1.87
CPSF7Q8N684 SETP2-201ENST00000553886 926 ntBASIC3.37□□□□□ -1.87
CPSF7Q8N684 AC012182.1-201ENST00000570133 895 ntBASIC3.37□□□□□ -1.87
CPSF7Q8N684 AC006270.2-201ENST00000578523 652 ntBASIC3.37□□□□□ -1.87
CPSF7Q8N684 AC060771.1-201ENST00000582031 164 ntBASIC3.37□□□□□ -1.87
CPSF7Q8N684 ZNF415P1-201ENST00000582279 1166 ntBASIC3.37□□□□□ -1.87
CPSF7Q8N684 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.37□□□□□ -1.87
CPSF7Q8N684 AC025594.3-201ENST00000613068 790 ntBASIC3.37□□□□□ -1.87
CPSF7Q8N684 AC073476.4-201ENST00000628409 72 ntBASIC3.37□□□□□ -1.87
CPSF7Q8N684 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.37□□□□□ -1.87
CPSF7Q8N684 U6.105-201ENST00000637379 88 ntBASIC3.37□□□□□ -1.87
CPSF7Q8N684 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
CPSF7Q8N684 MTCO1P12-201ENST00000414273 1543 ntBASIC3.37□□□□□ -1.87
CPSF7Q8N684 MTCO1P9-201ENST00000505577 1534 ntBASIC3.37□□□□□ -1.87
CPSF7Q8N684 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CPSF7Q8N684 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
CPSF7Q8N684 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CPSF7Q8N684 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.36□□□□□ -1.87
CPSF7Q8N684 AL390237.1-201ENST00000404226 1415 ntBASIC3.36□□□□□ -1.87
CPSF7Q8N684 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CPSF7Q8N684 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CPSF7Q8N684 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CPSF7Q8N684 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
CPSF7Q8N684 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CPSF7Q8N684 SNORA7.2-201ENST00000364446 145 ntBASIC3.36□□□□□ -1.87
CPSF7Q8N684 RNU6-1181P-201ENST00000384191 106 ntBASIC3.36□□□□□ -1.87
CPSF7Q8N684 MIR218-2-201ENST00000385006 110 ntBASIC3.36□□□□□ -1.87
CPSF7Q8N684 AC126124.2-201ENST00000413542 321 ntBASIC3.36□□□□□ -1.87
CPSF7Q8N684 OR1AA1P-201ENST00000419597 916 ntBASIC3.36□□□□□ -1.87
CPSF7Q8N684 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.36□□□□□ -1.87
CPSF7Q8N684 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.36□□□□□ -1.87
CPSF7Q8N684 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.36□□□□□ -1.87
CPSF7Q8N684 AC010153.1-201ENST00000432862 727 ntBASIC3.36□□□□□ -1.87
CPSF7Q8N684 RPL22P17-201ENST00000438729 315 ntBASIC3.36□□□□□ -1.87
CPSF7Q8N684 USP9YP12-201ENST00000450481 570 ntBASIC3.36□□□□□ -1.87
CPSF7Q8N684 AL590365.1-201ENST00000450788 243 ntBASIC3.36□□□□□ -1.87
CPSF7Q8N684 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.36□□□□□ -1.87
CPSF7Q8N684 RNA5SP269-201ENST00000459032 137 ntBASIC3.36□□□□□ -1.87
CPSF7Q8N684 RPL23AP67-201ENST00000465341 474 ntBASIC3.36□□□□□ -1.87
CPSF7Q8N684 AC092451.1-201ENST00000480211 153 ntBASIC3.36□□□□□ -1.87
CPSF7Q8N684 RN7SL293P-201ENST00000481765 281 ntBASIC3.36□□□□□ -1.87
CPSF7Q8N684 AC093278.1-201ENST00000494700 600 ntBASIC3.36□□□□□ -1.87
CPSF7Q8N684 AC112204.1-201ENST00000502591 103 ntBASIC3.36□□□□□ -1.87
CPSF7Q8N684 HMGB1P22-201ENST00000505315 124 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms