Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SIX5Q8N196 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
SIX5Q8N196 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SIX5Q8N196 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SIX5Q8N196 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SIX5Q8N196 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SIX5Q8N196 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SIX5Q8N196 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SIX5Q8N196 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SIX5Q8N196 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SIX5Q8N196 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
SIX5Q8N196 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
SIX5Q8N196 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SIX5Q8N196 SNURFL-201ENST00000309296 343 ntBASIC5.52□□□□□ -1.53
SIX5Q8N196 Y_RNA.106-201ENST00000363189 100 ntBASIC5.52□□□□□ -1.53
SIX5Q8N196 Y_RNA.577-201ENST00000384794 101 ntBASIC5.52□□□□□ -1.53
SIX5Q8N196 MIR578-201ENST00000384828 96 ntBASIC5.52□□□□□ -1.53
SIX5Q8N196 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.52□□□□□ -1.53
SIX5Q8N196 AL590139.1-201ENST00000416267 400 ntBASIC5.52□□□□□ -1.53
SIX5Q8N196 AC119751.6-201ENST00000416712 186 ntBASIC5.52□□□□□ -1.53
SIX5Q8N196 AC007161.1-204ENST00000423039 460 ntBASIC5.52□□□□□ -1.53
SIX5Q8N196 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.52□□□□□ -1.53
SIX5Q8N196 DYNLT3P2-201ENST00000442517 295 ntBASIC5.52□□□□□ -1.53
SIX5Q8N196 AC011753.3-201ENST00000443436 406 ntBASIC5.52□□□□□ -1.53
SIX5Q8N196 AL360271.2-201ENST00000447710 161 ntBASIC5.52□□□□□ -1.53
SIX5Q8N196 TPT1P12-201ENST00000448968 492 ntBASIC5.52□□□□□ -1.53
SIX5Q8N196 AC092647.2-201ENST00000452998 253 ntBASIC5.52□□□□□ -1.53
SIX5Q8N196 AC133473.1-201ENST00000455173 299 ntBASIC5.52□□□□□ -1.53
SIX5Q8N196 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC5.52□□□□□ -1.53
SIX5Q8N196 AC108860.1-201ENST00000484521 383 ntBASIC5.52□□□□□ -1.53
SIX5Q8N196 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC5.52□□□□□ -1.53
SIX5Q8N196 RNU6-143P-201ENST00000516942 93 ntBASIC5.52□□□□□ -1.53
SIX5Q8N196 SNORA31.22-201ENST00000517204 135 ntBASIC5.52□□□□□ -1.53
SIX5Q8N196 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.52□□□□□ -1.53
SIX5Q8N196 AL359219.2-201ENST00000555184 348 ntBASIC5.52□□□□□ -1.53
SIX5Q8N196 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5.52□□□□□ -1.53
SIX5Q8N196 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC5.52□□□□□ -1.53
SIX5Q8N196 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC5.52□□□□□ -1.53
SIX5Q8N196 AC005951.2-201ENST00000576282 495 ntBASIC5.52□□□□□ -1.53
SIX5Q8N196 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.52□□□□□ -1.53
SIX5Q8N196 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SIX5Q8N196 SNORD39.4-201ENST00000620099 78 ntBASIC5.52□□□□□ -1.53
SIX5Q8N196 MIR8062-201ENST00000621515 85 ntBASIC5.52□□□□□ -1.53
SIX5Q8N196 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SIX5Q8N196 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
SIX5Q8N196 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
SIX5Q8N196 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
SIX5Q8N196 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SIX5Q8N196 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.51□□□□□ -1.53
SIX5Q8N196 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
SIX5Q8N196 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SIX5Q8N196 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.51□□□□□ -1.53
SIX5Q8N196 ASNSP1-201ENST00000518311 1939 ntBASIC5.51□□□□□ -1.53
SIX5Q8N196 RNU1-32P-201ENST00000363937 159 ntBASIC5.51□□□□□ -1.53
SIX5Q8N196 Y_RNA.396-201ENST00000383949 103 ntBASIC5.51□□□□□ -1.53
SIX5Q8N196 RNA5SP87-201ENST00000384155 118 ntBASIC5.51□□□□□ -1.53
SIX5Q8N196 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
SIX5Q8N196 AL030996.1-201ENST00000411430 235 ntBASIC5.51□□□□□ -1.53
SIX5Q8N196 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.51□□□□□ -1.53
SIX5Q8N196 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC5.51□□□□□ -1.53
SIX5Q8N196 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.51□□□□□ -1.53
SIX5Q8N196 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.51□□□□□ -1.53
SIX5Q8N196 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.51□□□□□ -1.53
SIX5Q8N196 RPL7P2-201ENST00000427639 268 ntBASIC5.51□□□□□ -1.53
SIX5Q8N196 AL158071.1-201ENST00000430315 461 ntBASIC5.51□□□□□ -1.53
SIX5Q8N196 RPS15AP10-201ENST00000432472 382 ntBASIC5.51□□□□□ -1.53
SIX5Q8N196 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC5.51□□□□□ -1.53
SIX5Q8N196 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.51□□□□□ -1.53
SIX5Q8N196 AC023424.1-201ENST00000496058 459 ntBASIC5.51□□□□□ -1.53
SIX5Q8N196 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.51□□□□□ -1.53
SIX5Q8N196 Y_RNA.715-201ENST00000517082 110 ntBASIC5.51□□□□□ -1.53
SIX5Q8N196 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.51□□□□□ -1.53
SIX5Q8N196 MIR4458-201ENST00000578872 75 ntBASIC5.51□□□□□ -1.53
SIX5Q8N196 LRRC37A5P-203ENST00000580181 585 ntBASIC5.51□□□□□ -1.53
SIX5Q8N196 AC008814.1-201ENST00000603797 406 ntBASIC5.51□□□□□ -1.53
SIX5Q8N196 AL512643.1-201ENST00000635735 524 ntBASIC5.51□□□□□ -1.53
SIX5Q8N196 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.51□□□□□ -1.53
SIX5Q8N196 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SIX5Q8N196 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SIX5Q8N196 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
SIX5Q8N196 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SIX5Q8N196 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SIX5Q8N196 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
SIX5Q8N196 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SIX5Q8N196 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.5□□□□□ -1.53
SIX5Q8N196 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
SIX5Q8N196 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SIX5Q8N196 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.5□□□□□ -1.53
SIX5Q8N196 RNU6-596P-201ENST00000365395 98 ntBASIC5.5□□□□□ -1.53
SIX5Q8N196 SNORA62-201ENST00000365493 153 ntBASIC5.5□□□□□ -1.53
SIX5Q8N196 Y_RNA.552-201ENST00000384665 112 ntBASIC5.5□□□□□ -1.53
SIX5Q8N196 MIR105-1-201ENST00000385222 81 ntBASIC5.5□□□□□ -1.53
SIX5Q8N196 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SIX5Q8N196 RNA5SP296-201ENST00000410523 111 ntBASIC5.5□□□□□ -1.53
SIX5Q8N196 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.5□□□□□ -1.53
SIX5Q8N196 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC5.5□□□□□ -1.53
SIX5Q8N196 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SIX5Q8N196 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.5□□□□□ -1.53
SIX5Q8N196 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC5.5□□□□□ -1.53
SIX5Q8N196 GAPDHP25-201ENST00000447061 1001 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms