Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC71Q8IV32 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.01□□□□□ -1.93
CCDC71Q8IV32 RNU2-47P-201ENST00000410649 186 ntBASIC3.01□□□□□ -1.93
CCDC71Q8IV32 AC007899.1-201ENST00000412776 775 ntBASIC3.01□□□□□ -1.93
CCDC71Q8IV32 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC71Q8IV32 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC71Q8IV32 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC71Q8IV32 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.01□□□□□ -1.93
CCDC71Q8IV32 AC009969.1-201ENST00000438726 172 ntBASIC3.01□□□□□ -1.93
CCDC71Q8IV32 AL117351.1-201ENST00000438864 766 ntBASIC3.01□□□□□ -1.93
CCDC71Q8IV32 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC71Q8IV32 Z75741.1-201ENST00000446793 314 ntBASIC3.01□□□□□ -1.93
CCDC71Q8IV32 snoU13.8-201ENST00000458890 104 ntBASIC3.01□□□□□ -1.93
CCDC71Q8IV32 AC072039.1-201ENST00000477611 581 ntBASIC3.01□□□□□ -1.93
CCDC71Q8IV32 AC010486.2-201ENST00000505572 483 ntBASIC3.01□□□□□ -1.93
CCDC71Q8IV32 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC71Q8IV32 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC71Q8IV32 AC119751.5-201ENST00000514077 770 ntBASIC3.01□□□□□ -1.93
CCDC71Q8IV32 RNA5SP217-201ENST00000515959 91 ntBASIC3.01□□□□□ -1.93
CCDC71Q8IV32 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC71Q8IV32 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.01□□□□□ -1.93
CCDC71Q8IV32 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC71Q8IV32 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC71Q8IV32 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC71Q8IV32 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.01□□□□□ -1.93
CCDC71Q8IV32 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC71Q8IV32 AC034268.2-201ENST00000571784 482 ntBASIC3.01□□□□□ -1.93
CCDC71Q8IV32 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.01□□□□□ -1.93
CCDC71Q8IV32 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC71Q8IV32 AC090616.2-202ENST00000584248 222 ntBASIC3.01□□□□□ -1.93
CCDC71Q8IV32 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC71Q8IV32 DUXAP11-201ENST00000603858 526 ntBASIC3.01□□□□□ -1.93
CCDC71Q8IV32 AC025811.1-201ENST00000604312 472 ntBASIC3.01□□□□□ -1.93
CCDC71Q8IV32 AL590282.1-201ENST00000610379 1136 ntBASIC3.01□□□□□ -1.93
CCDC71Q8IV32 AC004223.4-201ENST00000612426 332 ntBASIC3.01□□□□□ -1.93
CCDC71Q8IV32 AL162274.2-201ENST00000614406 332 ntBASIC3.01□□□□□ -1.93
CCDC71Q8IV32 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.01□□□□□ -1.93
CCDC71Q8IV32 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
CCDC71Q8IV32 AL603755.1-201ENST00000619504 163 ntBASIC3.01□□□□□ -1.93
CCDC71Q8IV32 SNORD39.4-201ENST00000620099 78 ntBASIC3.01□□□□□ -1.93
CCDC71Q8IV32 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.01□□□□□ -1.93
CCDC71Q8IV32 AC009039.2-201ENST00000624524 529 ntBASIC3.01□□□□□ -1.93
CCDC71Q8IV32 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.01□□□□□ -1.93
CCDC71Q8IV32 PCMTD1P7-201ENST00000634506 357 ntBASIC3.01□□□□□ -1.93
CCDC71Q8IV32 AC097655.1-201ENST00000635075 318 ntBASIC3.01□□□□□ -1.93
CCDC71Q8IV32 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC71Q8IV32 MTND5P7-201ENST00000413558 1798 ntBASIC3.01□□□□□ -1.93
CCDC71Q8IV32 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC71Q8IV32 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC71Q8IV32 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
CCDC71Q8IV32 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC71Q8IV32 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC71Q8IV32 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CCDC71Q8IV32 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3□□□□□ -1.93
CCDC71Q8IV32 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CCDC71Q8IV32 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3□□□□□ -1.93
CCDC71Q8IV32 AL672167.1-206ENST00000356293 943 ntBASIC3□□□□□ -1.93
CCDC71Q8IV32 RNU6-500P-201ENST00000362349 107 ntBASIC3□□□□□ -1.93
CCDC71Q8IV32 RNU6-600P-201ENST00000362524 99 ntBASIC3□□□□□ -1.93
CCDC71Q8IV32 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3□□□□□ -1.93
CCDC71Q8IV32 MIR1305-201ENST00000408300 86 ntBASIC3□□□□□ -1.93
CCDC71Q8IV32 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3□□□□□ -1.93
CCDC71Q8IV32 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3□□□□□ -1.93
CCDC71Q8IV32 AC063979.1-201ENST00000415539 377 ntBASIC3□□□□□ -1.93
CCDC71Q8IV32 SDCBPP3-201ENST00000419629 891 ntBASIC3□□□□□ -1.93
CCDC71Q8IV32 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3□□□□□ -1.93
CCDC71Q8IV32 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3□□□□□ -1.93
CCDC71Q8IV32 MTCYBP39-201ENST00000437562 491 ntBASIC3□□□□□ -1.93
CCDC71Q8IV32 CST9LP2-201ENST00000437612 320 ntBASIC3□□□□□ -1.93
CCDC71Q8IV32 HMGB1P12-201ENST00000438594 598 ntBASIC3□□□□□ -1.93
CCDC71Q8IV32 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3□□□□□ -1.93
CCDC71Q8IV32 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3□□□□□ -1.93
CCDC71Q8IV32 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3□□□□□ -1.93
CCDC71Q8IV32 Z99127.3-201ENST00000448158 395 ntBASIC3□□□□□ -1.93
CCDC71Q8IV32 HMGN2P16-201ENST00000456802 261 ntBASIC3□□□□□ -1.93
CCDC71Q8IV32 SNORD121B-201ENST00000458838 81 ntBASIC3□□□□□ -1.93
CCDC71Q8IV32 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3□□□□□ -1.93
CCDC71Q8IV32 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3□□□□□ -1.93
CCDC71Q8IV32 AC022447.3-201ENST00000506865 495 ntBASIC3□□□□□ -1.93
CCDC71Q8IV32 POU5F1P7-201ENST00000508759 541 ntBASIC3□□□□□ -1.93
CCDC71Q8IV32 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3□□□□□ -1.93
CCDC71Q8IV32 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3□□□□□ -1.93
CCDC71Q8IV32 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3□□□□□ -1.93
CCDC71Q8IV32 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3□□□□□ -1.93
CCDC71Q8IV32 RNU6-714P-201ENST00000516963 103 ntBASIC3□□□□□ -1.93
CCDC71Q8IV32 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3□□□□□ -1.93
CCDC71Q8IV32 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3□□□□□ -1.93
CCDC71Q8IV32 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3□□□□□ -1.93
CCDC71Q8IV32 AC068587.4-201ENST00000533893 186 ntBASIC3□□□□□ -1.93
CCDC71Q8IV32 AC007954.1-201ENST00000554198 494 ntBASIC3□□□□□ -1.93
CCDC71Q8IV32 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3□□□□□ -1.93
CCDC71Q8IV32 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3□□□□□ -1.93
CCDC71Q8IV32 CLIC4P2-201ENST00000601934 717 ntBASIC3□□□□□ -1.93
CCDC71Q8IV32 AL031176.1-201ENST00000604554 466 ntBASIC3□□□□□ -1.93
CCDC71Q8IV32 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3□□□□□ -1.93
CCDC71Q8IV32 VIS1.1-201ENST00000610517 203 ntBASIC3□□□□□ -1.93
CCDC71Q8IV32 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3□□□□□ -1.93
CCDC71Q8IV32 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3□□□□□ -1.93
CCDC71Q8IV32 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
CCDC71Q8IV32 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms