Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC093852.1-201ENST00000503587 266 ntBASIC5.73□□□□□ -1.49
RNF135Q8IUD6 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.73□□□□□ -1.49
RNF135Q8IUD6 AC022447.4-201ENST00000504053 364 ntBASIC5.73□□□□□ -1.49
RNF135Q8IUD6 AC087369.1-201ENST00000520775 996 ntBASIC5.73□□□□□ -1.49
RNF135Q8IUD6 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC5.73□□□□□ -1.49
RNF135Q8IUD6 AC126177.3-201ENST00000551839 688 ntBASIC5.73□□□□□ -1.49
RNF135Q8IUD6 AL162431.4-201ENST00000604674 411 ntBASIC5.73□□□□□ -1.49
RNF135Q8IUD6 AC109583.2-201ENST00000617367 129 ntBASIC5.73□□□□□ -1.49
RNF135Q8IUD6 U6.104-201ENST00000637979 90 ntBASIC5.73□□□□□ -1.49
RNF135Q8IUD6 AC132825.6-201ENST00000638861 357 ntBASIC5.73□□□□□ -1.49
RNF135Q8IUD6 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RNF135Q8IUD6 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RNF135Q8IUD6 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RNF135Q8IUD6 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
RNF135Q8IUD6 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.73□□□□□ -1.49
RNF135Q8IUD6 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RNF135Q8IUD6 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.73□□□□□ -1.49
RNF135Q8IUD6 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
RNF135Q8IUD6 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
RNF135Q8IUD6 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RNF135Q8IUD6 AC005332.5-201ENST00000591222 2919 ntBASIC5.72□□□□□ -1.49
RNF135Q8IUD6 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RNF135Q8IUD6 AC139769.1-204ENST00000472297 1931 ntBASIC5.72□□□□□ -1.49
RNF135Q8IUD6 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RNF135Q8IUD6 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
RNF135Q8IUD6 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RNF135Q8IUD6 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.72□□□□□ -1.49
RNF135Q8IUD6 OR56A5-201ENST00000340110 738 ntBASIC5.72□□□□□ -1.49
RNF135Q8IUD6 MIR133A2-201ENST00000347538 102 ntBASIC5.72□□□□□ -1.49
RNF135Q8IUD6 SNORA17.1-201ENST00000362945 126 ntBASIC5.72□□□□□ -1.49
RNF135Q8IUD6 RNU6-1249P-201ENST00000363237 111 ntBASIC5.72□□□□□ -1.49
RNF135Q8IUD6 Y_RNA.270-201ENST00000364693 104 ntBASIC5.72□□□□□ -1.49
RNF135Q8IUD6 RNU6-662P-201ENST00000384253 104 ntBASIC5.72□□□□□ -1.49
RNF135Q8IUD6 AL589765.3-201ENST00000446084 462 ntBASIC5.72□□□□□ -1.49
RNF135Q8IUD6 AL360271.2-201ENST00000447710 161 ntBASIC5.72□□□□□ -1.49
RNF135Q8IUD6 PRDX3P3-201ENST00000447765 522 ntBASIC5.72□□□□□ -1.49
RNF135Q8IUD6 AL356981.1-201ENST00000454879 684 ntBASIC5.72□□□□□ -1.49
RNF135Q8IUD6 AC133473.1-201ENST00000455173 299 ntBASIC5.72□□□□□ -1.49
RNF135Q8IUD6 AC083829.1-201ENST00000503756 657 ntBASIC5.72□□□□□ -1.49
RNF135Q8IUD6 MTND3P25-201ENST00000509243 135 ntBASIC5.72□□□□□ -1.49
RNF135Q8IUD6 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.72□□□□□ -1.49
RNF135Q8IUD6 AC004980.4-201ENST00000513375 203 ntBASIC5.72□□□□□ -1.49
RNF135Q8IUD6 RNU6-914P-201ENST00000516749 109 ntBASIC5.72□□□□□ -1.49
RNF135Q8IUD6 RN7SKP92-201ENST00000517266 244 ntBASIC5.72□□□□□ -1.49
RNF135Q8IUD6 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
RNF135Q8IUD6 MIR4458-201ENST00000578872 75 ntBASIC5.72□□□□□ -1.49
RNF135Q8IUD6 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.72□□□□□ -1.49
RNF135Q8IUD6 MIR3133-201ENST00000583157 78 ntBASIC5.72□□□□□ -1.49
RNF135Q8IUD6 AL591516.1-201ENST00000611326 274 ntBASIC5.72□□□□□ -1.49
RNF135Q8IUD6 AC005344.1-201ENST00000613391 459 ntBASIC5.72□□□□□ -1.49
RNF135Q8IUD6 AC025574.2-201ENST00000615621 514 ntBASIC5.72□□□□□ -1.49
RNF135Q8IUD6 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
RNF135Q8IUD6 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.72□□□□□ -1.49
RNF135Q8IUD6 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
RNF135Q8IUD6 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.72□□□□□ -1.49
RNF135Q8IUD6 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RNF135Q8IUD6 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
RNF135Q8IUD6 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.72□□□□□ -1.49
RNF135Q8IUD6 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
RNF135Q8IUD6 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RNF135Q8IUD6 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
RNF135Q8IUD6 AC073136.1-201ENST00000449426 2884 ntBASIC5.72□□□□□ -1.49
RNF135Q8IUD6 INTS6P1-201ENST00000504674 2530 ntBASIC5.72□□□□□ -1.49
RNF135Q8IUD6 ZNF72P-201ENST00000425869 1908 ntBASIC5.72□□□□□ -1.49
RNF135Q8IUD6 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RNF135Q8IUD6 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
RNF135Q8IUD6 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
RNF135Q8IUD6 PRO1804-201ENST00000623780 2050 ntBASIC5.71□□□□□ -1.49
RNF135Q8IUD6 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
RNF135Q8IUD6 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.49
RNF135Q8IUD6 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.71□□□□□ -1.49
RNF135Q8IUD6 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
RNF135Q8IUD6 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RNF135Q8IUD6 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RNF135Q8IUD6 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RNF135Q8IUD6 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
RNF135Q8IUD6 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
RNF135Q8IUD6 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.71□□□□□ -1.5
RNF135Q8IUD6 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RNF135Q8IUD6 MTND5P6-201ENST00000422338 1798 ntBASIC5.71□□□□□ -1.5
RNF135Q8IUD6 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
RNF135Q8IUD6 Y_RNA.462-201ENST00000384268 102 ntBASIC5.71□□□□□ -1.5
RNF135Q8IUD6 RNU6-790P-201ENST00000384479 105 ntBASIC5.71□□□□□ -1.5
RNF135Q8IUD6 AL030996.1-201ENST00000411430 235 ntBASIC5.71□□□□□ -1.5
RNF135Q8IUD6 RPL7AP73-201ENST00000413490 353 ntBASIC5.71□□□□□ -1.5
RNF135Q8IUD6 AL354868.1-201ENST00000417077 482 ntBASIC5.71□□□□□ -1.5
RNF135Q8IUD6 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.71□□□□□ -1.5
RNF135Q8IUD6 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC5.71□□□□□ -1.5
RNF135Q8IUD6 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.71□□□□□ -1.5
RNF135Q8IUD6 snoU13.3-201ENST00000459441 104 ntBASIC5.71□□□□□ -1.5
RNF135Q8IUD6 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
RNF135Q8IUD6 RPS24P16-201ENST00000497294 392 ntBASIC5.71□□□□□ -1.5
RNF135Q8IUD6 IGKV2D-23-201ENST00000518179 286 ntBASIC5.71□□□□□ -1.5
RNF135Q8IUD6 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.71□□□□□ -1.5
RNF135Q8IUD6 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.71□□□□□ -1.5
RNF135Q8IUD6 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.71□□□□□ -1.5
RNF135Q8IUD6 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.71□□□□□ -1.5
RNF135Q8IUD6 OR1M4P-201ENST00000589199 287 ntBASIC5.71□□□□□ -1.5
RNF135Q8IUD6 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.71□□□□□ -1.5
RNF135Q8IUD6 AC006363.1-201ENST00000603806 463 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms