Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 RPL32P28-201ENST00000443577 397 ntBASIC1.97□□□□□ -2.09
LRRC28Q86X40 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
LRRC28Q86X40 AC108729.2-201ENST00000476543 840 ntBASIC1.97□□□□□ -2.09
LRRC28Q86X40 AC109486.1-201ENST00000486833 374 ntBASIC1.97□□□□□ -2.09
LRRC28Q86X40 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC1.97□□□□□ -2.09
LRRC28Q86X40 RNU6-416P-201ENST00000516265 103 ntBASIC1.97□□□□□ -2.09
LRRC28Q86X40 RNU1-40P-201ENST00000516816 164 ntBASIC1.97□□□□□ -2.09
LRRC28Q86X40 RNU1-97P-201ENST00000516872 164 ntBASIC1.97□□□□□ -2.09
LRRC28Q86X40 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC1.97□□□□□ -2.09
LRRC28Q86X40 COX6CP5-201ENST00000527162 228 ntBASIC1.97□□□□□ -2.09
LRRC28Q86X40 AC068339.2-201ENST00000534395 618 ntBASIC1.97□□□□□ -2.09
LRRC28Q86X40 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
LRRC28Q86X40 AC091544.4-201ENST00000555268 342 ntBASIC1.97□□□□□ -2.09
LRRC28Q86X40 AC009063.1-201ENST00000563342 702 ntBASIC1.97□□□□□ -2.09
LRRC28Q86X40 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.97□□□□□ -2.09
LRRC28Q86X40 AC090666.1-201ENST00000578241 445 ntBASIC1.97□□□□□ -2.09
LRRC28Q86X40 MIR5007-201ENST00000583098 95 ntBASIC1.97□□□□□ -2.09
LRRC28Q86X40 AL020997.3-201ENST00000602843 359 ntBASIC1.97□□□□□ -2.09
LRRC28Q86X40 AC090116.1-201ENST00000615679 446 ntBASIC1.97□□□□□ -2.09
LRRC28Q86X40 AC009159.1-201ENST00000618386 642 ntBASIC1.97□□□□□ -2.09
LRRC28Q86X40 AP006248.3-201ENST00000623580 594 ntBASIC1.97□□□□□ -2.09
LRRC28Q86X40 AC012640.5-201ENST00000623897 319 ntBASIC1.97□□□□□ -2.09
LRRC28Q86X40 AC064859.1-201ENST00000624741 174 ntBASIC1.97□□□□□ -2.09
LRRC28Q86X40 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.97□□□□□ -2.09
LRRC28Q86X40 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
LRRC28Q86X40 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.96□□□□□ -2.1
LRRC28Q86X40 OR5T3-201ENST00000303059 1023 ntBASIC1.96□□□□□ -2.1
LRRC28Q86X40 HSPE1P11-201ENST00000339579 310 ntBASIC1.96□□□□□ -2.1
LRRC28Q86X40 SNORD56.4-201ENST00000363883 71 ntBASIC1.96□□□□□ -2.1
LRRC28Q86X40 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC1.96□□□□□ -2.1
LRRC28Q86X40 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
LRRC28Q86X40 TATDN1P1-201ENST00000414123 891 ntBASIC1.96□□□□□ -2.1
LRRC28Q86X40 AL135786.1-201ENST00000415892 214 ntBASIC1.96□□□□□ -2.1
LRRC28Q86X40 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.96□□□□□ -2.1
LRRC28Q86X40 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.96□□□□□ -2.1
LRRC28Q86X40 SRIP2-201ENST00000428470 166 ntBASIC1.96□□□□□ -2.1
LRRC28Q86X40 AC093422.3-201ENST00000428506 305 ntBASIC1.96□□□□□ -2.1
LRRC28Q86X40 SDR42E1P3-201ENST00000438345 502 ntBASIC1.96□□□□□ -2.1
LRRC28Q86X40 IPO7P1-201ENST00000442031 636 ntBASIC1.96□□□□□ -2.1
LRRC28Q86X40 AC010099.1-201ENST00000455434 375 ntBASIC1.96□□□□□ -2.1
LRRC28Q86X40 AC025033.1-201ENST00000463883 194 ntBASIC1.96□□□□□ -2.1
LRRC28Q86X40 AC078857.1-201ENST00000469870 667 ntBASIC1.96□□□□□ -2.1
LRRC28Q86X40 RN7SL429P-201ENST00000479090 223 ntBASIC1.96□□□□□ -2.1
LRRC28Q86X40 RN7SL489P-201ENST00000486185 223 ntBASIC1.96□□□□□ -2.1
LRRC28Q86X40 RN7SL327P-201ENST00000488659 223 ntBASIC1.96□□□□□ -2.1
LRRC28Q86X40 AC096751.1-202ENST00000502691 1067 ntBASIC1.96□□□□□ -2.1
LRRC28Q86X40 AC025755.1-201ENST00000521306 278 ntBASIC1.96□□□□□ -2.1
LRRC28Q86X40 IGJP1-201ENST00000522682 475 ntBASIC1.96□□□□□ -2.1
LRRC28Q86X40 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.96□□□□□ -2.1
LRRC28Q86X40 AC010546.1-201ENST00000569391 485 ntBASIC1.96□□□□□ -2.1
LRRC28Q86X40 AC128687.1-201ENST00000605304 619 ntBASIC1.96□□□□□ -2.1
LRRC28Q86X40 AL450270.1-201ENST00000606160 391 ntBASIC1.96□□□□□ -2.1
LRRC28Q86X40 RN7SL853P-201ENST00000617250 223 ntBASIC1.96□□□□□ -2.1
LRRC28Q86X40 AC006213.5-201ENST00000619673 288 ntBASIC1.96□□□□□ -2.1
LRRC28Q86X40 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC1.96□□□□□ -2.1
LRRC28Q86X40 UCA1.1-201ENST00000620952 75 ntBASIC1.96□□□□□ -2.1
LRRC28Q86X40 AL353748.2-201ENST00000622148 471 ntBASIC1.96□□□□□ -2.1
LRRC28Q86X40 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC1.96□□□□□ -2.1
LRRC28Q86X40 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC1.96□□□□□ -2.1
LRRC28Q86X40 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.96□□□□□ -2.1
LRRC28Q86X40 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
LRRC28Q86X40 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.95□□□□□ -2.1
LRRC28Q86X40 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
LRRC28Q86X40 AC008669.1-201ENST00000565823 2178 ntBASIC1.95□□□□□ -2.1
LRRC28Q86X40 AC130650.2-201ENST00000618736 2403 ntBASIC1.95□□□□□ -2.1
LRRC28Q86X40 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.95□□□□□ -2.1
LRRC28Q86X40 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.95□□□□□ -2.1
LRRC28Q86X40 AL022578.1-201ENST00000439330 1433 ntBASIC1.95□□□□□ -2.1
LRRC28Q86X40 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
LRRC28Q86X40 RNA5SP138-201ENST00000365098 114 ntBASIC1.95□□□□□ -2.1
LRRC28Q86X40 RNU6-619P-201ENST00000365146 108 ntBASIC1.95□□□□□ -2.1
LRRC28Q86X40 RNU6-883P-201ENST00000384597 107 ntBASIC1.95□□□□□ -2.1
LRRC28Q86X40 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
LRRC28Q86X40 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
LRRC28Q86X40 MTND4LP20-201ENST00000402379 270 ntBASIC1.95□□□□□ -2.1
LRRC28Q86X40 UBE2V1P11-201ENST00000411559 285 ntBASIC1.95□□□□□ -2.1
LRRC28Q86X40 AC107081.1-201ENST00000414975 361 ntBASIC1.95□□□□□ -2.1
LRRC28Q86X40 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.95□□□□□ -2.1
LRRC28Q86X40 VN1R42P-201ENST00000424651 344 ntBASIC1.95□□□□□ -2.1
LRRC28Q86X40 MTCO3P30-201ENST00000426425 670 ntBASIC1.95□□□□□ -2.1
LRRC28Q86X40 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.95□□□□□ -2.1
LRRC28Q86X40 RNFT1P2-201ENST00000443064 757 ntBASIC1.95□□□□□ -2.1
LRRC28Q86X40 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.95□□□□□ -2.1
LRRC28Q86X40 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.95□□□□□ -2.1
LRRC28Q86X40 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
LRRC28Q86X40 SNORA48.9-201ENST00000516419 162 ntBASIC1.95□□□□□ -2.1
LRRC28Q86X40 RNA5SP281-201ENST00000516504 135 ntBASIC1.95□□□□□ -2.1
LRRC28Q86X40 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.95□□□□□ -2.1
LRRC28Q86X40 OR8K4P-201ENST00000534608 872 ntBASIC1.95□□□□□ -2.1
LRRC28Q86X40 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
LRRC28Q86X40 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.95□□□□□ -2.1
LRRC28Q86X40 AC027807.1-201ENST00000559921 996 ntBASIC1.95□□□□□ -2.1
LRRC28Q86X40 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC1.95□□□□□ -2.1
LRRC28Q86X40 AC095057.3-201ENST00000567102 1157 ntBASIC1.95□□□□□ -2.1
LRRC28Q86X40 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.95□□□□□ -2.1
LRRC28Q86X40 AC005332.10-201ENST00000612725 619 ntBASIC1.95□□□□□ -2.1
LRRC28Q86X40 AC104307.1-201ENST00000616142 196 ntBASIC1.95□□□□□ -2.1
LRRC28Q86X40 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC1.95□□□□□ -2.1
LRRC28Q86X40 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
LRRC28Q86X40 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms