Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 RNU7-51P-201ENST00000516560 62 ntBASIC3.85□□□□□ -1.79
PTCHD4Q6ZW05 HMGN1P28-201ENST00000521340 364 ntBASIC3.85□□□□□ -1.79
PTCHD4Q6ZW05 ADI1P3-201ENST00000549509 470 ntBASIC3.85□□□□□ -1.79
PTCHD4Q6ZW05 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.85□□□□□ -1.79
PTCHD4Q6ZW05 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.85□□□□□ -1.79
PTCHD4Q6ZW05 MIR4293-201ENST00000584305 78 ntBASIC3.85□□□□□ -1.79
PTCHD4Q6ZW05 SNRPGP15-201ENST00000600149 222 ntBASIC3.85□□□□□ -1.79
PTCHD4Q6ZW05 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.85□□□□□ -1.79
PTCHD4Q6ZW05 AC009994.1-201ENST00000606889 253 ntBASIC3.85□□□□□ -1.79
PTCHD4Q6ZW05 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.85□□□□□ -1.79
PTCHD4Q6ZW05 Y_RNA.804-201ENST00000615262 101 ntBASIC3.85□□□□□ -1.79
PTCHD4Q6ZW05 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.85□□□□□ -1.79
PTCHD4Q6ZW05 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.85□□□□□ -1.79
PTCHD4Q6ZW05 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PTCHD4Q6ZW05 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
PTCHD4Q6ZW05 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PTCHD4Q6ZW05 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PTCHD4Q6ZW05 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
PTCHD4Q6ZW05 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.84□□□□□ -1.79
PTCHD4Q6ZW05 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PTCHD4Q6ZW05 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
PTCHD4Q6ZW05 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PTCHD4Q6ZW05 OR5P1P-201ENST00000299512 925 ntBASIC3.84□□□□□ -1.79
PTCHD4Q6ZW05 MIR331-201ENST00000362302 94 ntBASIC3.84□□□□□ -1.79
PTCHD4Q6ZW05 RNU6-1155P-201ENST00000363554 107 ntBASIC3.84□□□□□ -1.79
PTCHD4Q6ZW05 RNVU1-6-201ENST00000364688 164 ntBASIC3.84□□□□□ -1.79
PTCHD4Q6ZW05 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.84□□□□□ -1.79
PTCHD4Q6ZW05 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
PTCHD4Q6ZW05 SNORA37-201ENST00000384504 129 ntBASIC3.84□□□□□ -1.79
PTCHD4Q6ZW05 RNU6-606P-201ENST00000384721 111 ntBASIC3.84□□□□□ -1.79
PTCHD4Q6ZW05 RNU4-65P-201ENST00000410473 140 ntBASIC3.84□□□□□ -1.79
PTCHD4Q6ZW05 RPL21P111-201ENST00000418453 477 ntBASIC3.84□□□□□ -1.79
PTCHD4Q6ZW05 AC017083.1-201ENST00000428093 483 ntBASIC3.84□□□□□ -1.79
PTCHD4Q6ZW05 MED13P1-201ENST00000428342 171 ntBASIC3.84□□□□□ -1.79
PTCHD4Q6ZW05 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.84□□□□□ -1.79
PTCHD4Q6ZW05 MTATP6P16-201ENST00000434543 526 ntBASIC3.84□□□□□ -1.79
PTCHD4Q6ZW05 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.84□□□□□ -1.79
PTCHD4Q6ZW05 MTND4P25-201ENST00000441039 533 ntBASIC3.84□□□□□ -1.79
PTCHD4Q6ZW05 DDX3P2-201ENST00000446138 111 ntBASIC3.84□□□□□ -1.79
PTCHD4Q6ZW05 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.84□□□□□ -1.79
PTCHD4Q6ZW05 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.84□□□□□ -1.79
PTCHD4Q6ZW05 AL356010.1-201ENST00000456364 102 ntBASIC3.84□□□□□ -1.79
PTCHD4Q6ZW05 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.84□□□□□ -1.79
PTCHD4Q6ZW05 AC078785.3-201ENST00000476607 425 ntBASIC3.84□□□□□ -1.79
PTCHD4Q6ZW05 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
PTCHD4Q6ZW05 UBE2CP3-201ENST00000502715 450 ntBASIC3.84□□□□□ -1.79
PTCHD4Q6ZW05 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PTCHD4Q6ZW05 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.84□□□□□ -1.79
PTCHD4Q6ZW05 PCBP2P3-201ENST00000509726 843 ntBASIC3.84□□□□□ -1.79
PTCHD4Q6ZW05 AC046134.1-201ENST00000514454 666 ntBASIC3.84□□□□□ -1.79
PTCHD4Q6ZW05 SNORD27.1-201ENST00000516319 72 ntBASIC3.84□□□□□ -1.79
PTCHD4Q6ZW05 IGKV2-38-201ENST00000517443 247 ntBASIC3.84□□□□□ -1.79
PTCHD4Q6ZW05 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.84□□□□□ -1.79
PTCHD4Q6ZW05 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.84□□□□□ -1.79
PTCHD4Q6ZW05 AP006289.1-201ENST00000538089 277 ntBASIC3.84□□□□□ -1.79
PTCHD4Q6ZW05 AC107016.1-201ENST00000550463 337 ntBASIC3.84□□□□□ -1.79
PTCHD4Q6ZW05 AC055876.1-202ENST00000567053 138 ntBASIC3.84□□□□□ -1.79
PTCHD4Q6ZW05 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.84□□□□□ -1.79
PTCHD4Q6ZW05 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.84□□□□□ -1.79
PTCHD4Q6ZW05 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.84□□□□□ -1.79
PTCHD4Q6ZW05 AC008945.2-201ENST00000606056 604 ntBASIC3.84□□□□□ -1.79
PTCHD4Q6ZW05 AC128687.2-201ENST00000609657 566 ntBASIC3.84□□□□□ -1.79
PTCHD4Q6ZW05 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.84□□□□□ -1.79
PTCHD4Q6ZW05 AC104260.1-201ENST00000616660 539 ntBASIC3.84□□□□□ -1.79
PTCHD4Q6ZW05 AL603758.1-201ENST00000618654 241 ntBASIC3.84□□□□□ -1.79
PTCHD4Q6ZW05 AC104985.2-201ENST00000620598 500 ntBASIC3.84□□□□□ -1.79
PTCHD4Q6ZW05 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.84□□□□□ -1.79
PTCHD4Q6ZW05 AP003122.6-201ENST00000623831 495 ntBASIC3.84□□□□□ -1.79
PTCHD4Q6ZW05 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.84□□□□□ -1.79
PTCHD4Q6ZW05 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.84□□□□□ -1.79
PTCHD4Q6ZW05 MTND4P12-201ENST00000498999 1377 ntBASIC3.84□□□□□ -1.79
PTCHD4Q6ZW05 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
PTCHD4Q6ZW05 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.84□□□□□ -1.8
PTCHD4Q6ZW05 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
PTCHD4Q6ZW05 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.84□□□□□ -1.8
PTCHD4Q6ZW05 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
PTCHD4Q6ZW05 AC006020.1-201ENST00000420179 1854 ntBASIC3.84□□□□□ -1.8
PTCHD4Q6ZW05 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 OR56B2P-202ENST00000641377 2453 ntBASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 AC079741.1-201ENST00000321498 212 ntBASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 SNORA51.2-201ENST00000364595 132 ntBASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 RNU4-48P-201ENST00000365559 182 ntBASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 RNU6-641P-201ENST00000384006 107 ntBASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 AL136372.1-201ENST00000403060 228 ntBASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 OR51A5P-201ENST00000415429 942 ntBASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 RPS7P15-201ENST00000415804 584 ntBASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 SSXP9-201ENST00000417503 292 ntBASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 RPL23AP52-201ENST00000439311 478 ntBASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.83□□□□□ -1.8
PTCHD4Q6ZW05 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms