Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RNF111Q6ZNA4 SNORA75.6-201ENST00000391318 127 ntBASIC4.69□□□□□ -1.66
RNF111Q6ZNA4 SNORA77-201ENST00000408716 125 ntBASIC4.69□□□□□ -1.66
RNF111Q6ZNA4 Y_RNA.594-201ENST00000410373 140 ntBASIC4.69□□□□□ -1.66
RNF111Q6ZNA4 RNU4-6P-201ENST00000410804 122 ntBASIC4.69□□□□□ -1.66
RNF111Q6ZNA4 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.69□□□□□ -1.66
RNF111Q6ZNA4 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.69□□□□□ -1.66
RNF111Q6ZNA4 RPL7P37-201ENST00000425095 738 ntBASIC4.69□□□□□ -1.66
RNF111Q6ZNA4 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RNF111Q6ZNA4 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.69□□□□□ -1.66
RNF111Q6ZNA4 USP9YP16-201ENST00000430287 407 ntBASIC4.69□□□□□ -1.66
RNF111Q6ZNA4 NRBF2P3-201ENST00000432731 865 ntBASIC4.69□□□□□ -1.66
RNF111Q6ZNA4 AC236972.1-201ENST00000433225 199 ntBASIC4.69□□□□□ -1.66
RNF111Q6ZNA4 AL353597.2-202ENST00000434901 373 ntBASIC4.69□□□□□ -1.66
RNF111Q6ZNA4 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.69□□□□□ -1.66
RNF111Q6ZNA4 RPL34P20-201ENST00000442771 351 ntBASIC4.69□□□□□ -1.66
RNF111Q6ZNA4 USP9YP23-201ENST00000455085 407 ntBASIC4.69□□□□□ -1.66
RNF111Q6ZNA4 RNU7-167P-201ENST00000459160 62 ntBASIC4.69□□□□□ -1.66
RNF111Q6ZNA4 AC117503.1-201ENST00000472241 394 ntBASIC4.69□□□□□ -1.66
RNF111Q6ZNA4 AC010631.1-201ENST00000474150 156 ntBASIC4.69□□□□□ -1.66
RNF111Q6ZNA4 AC015911.1-201ENST00000495111 156 ntBASIC4.69□□□□□ -1.66
RNF111Q6ZNA4 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.69□□□□□ -1.66
RNF111Q6ZNA4 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.69□□□□□ -1.66
RNF111Q6ZNA4 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.69□□□□□ -1.66
RNF111Q6ZNA4 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.69□□□□□ -1.66
RNF111Q6ZNA4 RNU6-1069P-201ENST00000516612 133 ntBASIC4.69□□□□□ -1.66
RNF111Q6ZNA4 RNU6-1271P-201ENST00000517049 105 ntBASIC4.69□□□□□ -1.66
RNF111Q6ZNA4 RNU6-323P-201ENST00000521915 107 ntBASIC4.69□□□□□ -1.66
RNF111Q6ZNA4 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.69□□□□□ -1.66
RNF111Q6ZNA4 RPL21P7-201ENST00000557463 483 ntBASIC4.69□□□□□ -1.66
RNF111Q6ZNA4 AC051619.2-201ENST00000559063 397 ntBASIC4.69□□□□□ -1.66
RNF111Q6ZNA4 OR1F2P-201ENST00000570470 933 ntBASIC4.69□□□□□ -1.66
RNF111Q6ZNA4 DLEU2_5.1-201ENST00000615567 84 ntBASIC4.69□□□□□ -1.66
RNF111Q6ZNA4 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC4.69□□□□□ -1.66
RNF111Q6ZNA4 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.69□□□□□ -1.66
RNF111Q6ZNA4 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNF111Q6ZNA4 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RNF111Q6ZNA4 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
RNF111Q6ZNA4 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
RNF111Q6ZNA4 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNF111Q6ZNA4 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.68□□□□□ -1.66
RNF111Q6ZNA4 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
RNF111Q6ZNA4 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RNF111Q6ZNA4 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.68□□□□□ -1.66
RNF111Q6ZNA4 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
RNF111Q6ZNA4 RNU6-715P-201ENST00000365204 103 ntBASIC4.68□□□□□ -1.66
RNF111Q6ZNA4 SET-203ENST00000372688 801 ntTSL 2 BASIC4.68□□□□□ -1.66
RNF111Q6ZNA4 AC019155.1-201ENST00000382242 574 ntBASIC4.68□□□□□ -1.66
RNF111Q6ZNA4 RNA5SP372-201ENST00000390836 115 ntBASIC4.68□□□□□ -1.66
RNF111Q6ZNA4 AL139039.1-201ENST00000401900 692 ntBASIC4.68□□□□□ -1.66
RNF111Q6ZNA4 AL583834.1-201ENST00000406943 343 ntBASIC4.68□□□□□ -1.66
RNF111Q6ZNA4 U3.35-201ENST00000408405 208 ntBASIC4.68□□□□□ -1.66
RNF111Q6ZNA4 AL391219.1-201ENST00000422570 483 ntBASIC4.68□□□□□ -1.66
RNF111Q6ZNA4 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.68□□□□□ -1.66
RNF111Q6ZNA4 PTMAP6-201ENST00000439110 327 ntBASIC4.68□□□□□ -1.66
RNF111Q6ZNA4 MTCO3P45-201ENST00000443036 613 ntBASIC4.68□□□□□ -1.66
RNF111Q6ZNA4 MRPL48P1-201ENST00000445390 636 ntBASIC4.68□□□□□ -1.66
RNF111Q6ZNA4 AL162389.1-201ENST00000449233 177 ntBASIC4.68□□□□□ -1.66
RNF111Q6ZNA4 snoU109.4-201ENST00000458953 143 ntBASIC4.68□□□□□ -1.66
RNF111Q6ZNA4 RN7SL515P-201ENST00000463999 297 ntBASIC4.68□□□□□ -1.66
RNF111Q6ZNA4 HMGB1P25-201ENST00000468402 607 ntBASIC4.68□□□□□ -1.66
RNF111Q6ZNA4 AC128713.1-201ENST00000471495 306 ntBASIC4.68□□□□□ -1.66
RNF111Q6ZNA4 RNU6-635P-201ENST00000516651 102 ntBASIC4.68□□□□□ -1.66
RNF111Q6ZNA4 RNU6-699P-201ENST00000517081 110 ntBASIC4.68□□□□□ -1.66
RNF111Q6ZNA4 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.68□□□□□ -1.66
RNF111Q6ZNA4 AC007448.1-201ENST00000582714 234 ntBASIC4.68□□□□□ -1.66
RNF111Q6ZNA4 MIR4691-201ENST00000583764 85 ntBASIC4.68□□□□□ -1.66
RNF111Q6ZNA4 NUTF2P8-201ENST00000604593 363 ntBASIC4.68□□□□□ -1.66
RNF111Q6ZNA4 AC018462.2-201ENST00000605375 395 ntBASIC4.68□□□□□ -1.66
RNF111Q6ZNA4 AL591926.8-201ENST00000616876 211 ntBASIC4.68□□□□□ -1.66
RNF111Q6ZNA4 AC068870.2-201ENST00000620635 389 ntBASIC4.68□□□□□ -1.66
RNF111Q6ZNA4 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.68□□□□□ -1.66
RNF111Q6ZNA4 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.68□□□□□ -1.66
RNF111Q6ZNA4 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.68□□□□□ -1.66
RNF111Q6ZNA4 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.68□□□□□ -1.66
RNF111Q6ZNA4 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RNF111Q6ZNA4 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.68□□□□□ -1.66
RNF111Q6ZNA4 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.68□□□□□ -1.66
RNF111Q6ZNA4 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RNF111Q6ZNA4 AC027287.1-201ENST00000553115 1453 ntBASIC4.68□□□□□ -1.66
RNF111Q6ZNA4 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.68□□□□□ -1.66
RNF111Q6ZNA4 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.68□□□□□ -1.66
RNF111Q6ZNA4 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.67□□□□□ -1.66
RNF111Q6ZNA4 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RNF111Q6ZNA4 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RNF111Q6ZNA4 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.67□□□□□ -1.66
RNF111Q6ZNA4 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC4.67□□□□□ -1.66
RNF111Q6ZNA4 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RNF111Q6ZNA4 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
RNF111Q6ZNA4 RNU6-238P-201ENST00000363313 106 ntBASIC4.67□□□□□ -1.66
RNF111Q6ZNA4 SNORA74A-201ENST00000364089 198 ntBASIC4.67□□□□□ -1.66
RNF111Q6ZNA4 Y_RNA.399-201ENST00000383955 105 ntBASIC4.67□□□□□ -1.66
RNF111Q6ZNA4 RNU6-128P-201ENST00000383976 107 ntBASIC4.67□□□□□ -1.66
RNF111Q6ZNA4 Y_RNA.496-201ENST00000384444 101 ntBASIC4.67□□□□□ -1.66
RNF111Q6ZNA4 SNORD3H-201ENST00000384486 214 ntBASIC4.67□□□□□ -1.66
RNF111Q6ZNA4 SNORA70.10-201ENST00000384515 134 ntBASIC4.67□□□□□ -1.66
RNF111Q6ZNA4 RNU6-306P-201ENST00000384617 107 ntBASIC4.67□□□□□ -1.66
RNF111Q6ZNA4 MT-TG-201ENST00000387429 68 ntBASIC4.67□□□□□ -1.66
RNF111Q6ZNA4 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC4.67□□□□□ -1.66
RNF111Q6ZNA4 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms