Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 CR381572.1-201ENST00000625098 102 ntBASIC4.6□□□□□ -1.67
KRT40Q6A162 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
KRT40Q6A162 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
KRT40Q6A162 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
KRT40Q6A162 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.6□□□□□ -1.67
KRT40Q6A162 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
KRT40Q6A162 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.59□□□□□ -1.67
KRT40Q6A162 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.59□□□□□ -1.67
KRT40Q6A162 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
KRT40Q6A162 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
KRT40Q6A162 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
KRT40Q6A162 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
KRT40Q6A162 Y_RNA.356-201ENST00000365475 113 ntBASIC4.59□□□□□ -1.67
KRT40Q6A162 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
KRT40Q6A162 RNU6-1068P-201ENST00000410958 103 ntBASIC4.59□□□□□ -1.67
KRT40Q6A162 RNU6-603P-201ENST00000411403 107 ntBASIC4.59□□□□□ -1.67
KRT40Q6A162 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.59□□□□□ -1.67
KRT40Q6A162 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.59□□□□□ -1.67
KRT40Q6A162 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.59□□□□□ -1.67
KRT40Q6A162 ZNF680P1-201ENST00000436625 1469 ntBASIC4.59□□□□□ -1.67
KRT40Q6A162 SEPT14P3-201ENST00000439401 183 ntBASIC4.59□□□□□ -1.67
KRT40Q6A162 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.59□□□□□ -1.67
KRT40Q6A162 AL732372.2-207ENST00000445840 183 ntBASIC4.59□□□□□ -1.67
KRT40Q6A162 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.59□□□□□ -1.67
KRT40Q6A162 SEPT14P2-201ENST00000453405 183 ntBASIC4.59□□□□□ -1.67
KRT40Q6A162 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.59□□□□□ -1.67
KRT40Q6A162 SEPT14P4-201ENST00000513445 186 ntBASIC4.59□□□□□ -1.67
KRT40Q6A162 RNA5SP337-201ENST00000517007 109 ntBASIC4.59□□□□□ -1.67
KRT40Q6A162 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.59□□□□□ -1.67
KRT40Q6A162 FO082796.1-201ENST00000523795 183 ntBASIC4.59□□□□□ -1.67
KRT40Q6A162 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.59□□□□□ -1.67
KRT40Q6A162 OR5B19P-201ENST00000531766 928 ntBASIC4.59□□□□□ -1.67
KRT40Q6A162 OR5AL2P-201ENST00000532185 920 ntBASIC4.59□□□□□ -1.67
KRT40Q6A162 AC024224.1-201ENST00000538284 609 ntBASIC4.59□□□□□ -1.67
KRT40Q6A162 AC007424.1-203ENST00000554613 687 ntBASIC4.59□□□□□ -1.67
KRT40Q6A162 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.59□□□□□ -1.67
KRT40Q6A162 AC007038.2-201ENST00000608095 740 ntBASIC4.59□□□□□ -1.67
KRT40Q6A162 AC096577.2-201ENST00000611455 153 ntBASIC4.59□□□□□ -1.67
KRT40Q6A162 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.59□□□□□ -1.67
KRT40Q6A162 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.59□□□□□ -1.67
KRT40Q6A162 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.59□□□□□ -1.67
KRT40Q6A162 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
KRT40Q6A162 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
KRT40Q6A162 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
KRT40Q6A162 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
KRT40Q6A162 Y_RNA.72-201ENST00000362894 103 ntBASIC4.58□□□□□ -1.68
KRT40Q6A162 Y_RNA.142-201ENST00000363491 102 ntBASIC4.58□□□□□ -1.68
KRT40Q6A162 RNU6-108P-201ENST00000365558 107 ntBASIC4.58□□□□□ -1.68
KRT40Q6A162 RNU2-9P-201ENST00000410194 145 ntBASIC4.58□□□□□ -1.68
KRT40Q6A162 AC012065.2-201ENST00000421295 375 ntBASIC4.58□□□□□ -1.68
KRT40Q6A162 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.58□□□□□ -1.68
KRT40Q6A162 KCTD9P3-201ENST00000434597 1169 ntBASIC4.58□□□□□ -1.68
KRT40Q6A162 AC083863.1-201ENST00000438811 231 ntBASIC4.58□□□□□ -1.68
KRT40Q6A162 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.58□□□□□ -1.68
KRT40Q6A162 AL118496.2-201ENST00000448300 230 ntBASIC4.58□□□□□ -1.68
KRT40Q6A162 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.58□□□□□ -1.68
KRT40Q6A162 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.58□□□□□ -1.68
KRT40Q6A162 HMGB1P15-201ENST00000453854 435 ntBASIC4.58□□□□□ -1.68
KRT40Q6A162 SNORA59A-201ENST00000459326 152 ntBASIC4.58□□□□□ -1.68
KRT40Q6A162 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
KRT40Q6A162 HMGB1P21-201ENST00000502313 581 ntBASIC4.58□□□□□ -1.68
KRT40Q6A162 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.58□□□□□ -1.68
KRT40Q6A162 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.58□□□□□ -1.68
KRT40Q6A162 AC010486.1-201ENST00000511793 424 ntBASIC4.58□□□□□ -1.68
KRT40Q6A162 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.58□□□□□ -1.68
KRT40Q6A162 SCARNA24.1-201ENST00000516465 137 ntBASIC4.58□□□□□ -1.68
KRT40Q6A162 AP003497.1-201ENST00000528472 562 ntBASIC4.58□□□□□ -1.68
KRT40Q6A162 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.58□□□□□ -1.68
KRT40Q6A162 AC084757.4-201ENST00000616350 526 ntBASIC4.58□□□□□ -1.68
KRT40Q6A162 AL596245.1-201ENST00000618994 362 ntBASIC4.58□□□□□ -1.68
KRT40Q6A162 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.58□□□□□ -1.68
KRT40Q6A162 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
KRT40Q6A162 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
KRT40Q6A162 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.57□□□□□ -1.68
KRT40Q6A162 AC005332.5-201ENST00000591222 2919 ntBASIC4.57□□□□□ -1.68
KRT40Q6A162 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.57□□□□□ -1.68
KRT40Q6A162 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.57□□□□□ -1.68
KRT40Q6A162 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.57□□□□□ -1.68
KRT40Q6A162 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
KRT40Q6A162 RNU6-1120P-201ENST00000362988 108 ntBASIC4.57□□□□□ -1.68
KRT40Q6A162 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
KRT40Q6A162 MIR1-2-201ENST00000384961 85 ntBASIC4.57□□□□□ -1.68
KRT40Q6A162 RPL7P60-201ENST00000397636 735 ntBASIC4.57□□□□□ -1.68
KRT40Q6A162 SSXP10-201ENST00000402595 565 ntBASIC4.57□□□□□ -1.68
KRT40Q6A162 LAP3P1-201ENST00000403648 294 ntBASIC4.57□□□□□ -1.68
KRT40Q6A162 RNA5SP118-201ENST00000410385 109 ntBASIC4.57□□□□□ -1.68
KRT40Q6A162 RNU4-6P-201ENST00000410804 122 ntBASIC4.57□□□□□ -1.68
KRT40Q6A162 EEF1A1P40-201ENST00000412883 573 ntBASIC4.57□□□□□ -1.68
KRT40Q6A162 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.57□□□□□ -1.68
KRT40Q6A162 AC004987.3-201ENST00000413879 771 ntBASIC4.57□□□□□ -1.68
KRT40Q6A162 AC007390.1-201ENST00000415722 356 ntBASIC4.57□□□□□ -1.68
KRT40Q6A162 AC091286.1-201ENST00000431233 461 ntBASIC4.57□□□□□ -1.68
KRT40Q6A162 AC087650.1-201ENST00000431445 468 ntBASIC4.57□□□□□ -1.68
KRT40Q6A162 AC119618.1-201ENST00000434191 222 ntBASIC4.57□□□□□ -1.68
KRT40Q6A162 TAAR7P-201ENST00000436141 242 ntBASIC4.57□□□□□ -1.68
KRT40Q6A162 HMGB1P37-201ENST00000439613 609 ntBASIC4.57□□□□□ -1.68
KRT40Q6A162 AL451050.1-201ENST00000450126 415 ntBASIC4.57□□□□□ -1.68
KRT40Q6A162 CACYBPP2-201ENST00000453625 678 ntBASIC4.57□□□□□ -1.68
KRT40Q6A162 AC104308.1-201ENST00000454621 333 ntBASIC4.57□□□□□ -1.68
KRT40Q6A162 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms