Protein–RNA interactions for Protein: Q15459

SF3A1, Splicing factor 3A subunit 1, humanhuman

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1Q15459 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5□□□□□ -1.61
SF3A1Q15459 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC5□□□□□ -1.61
SF3A1Q15459 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC5□□□□□ -1.61
SF3A1Q15459 AP005205.1-201ENST00000563503 508 ntBASIC5□□□□□ -1.61
SF3A1Q15459 CYP4A43P-201ENST00000568156 121 ntBASIC5□□□□□ -1.61
SF3A1Q15459 AL158032.1-201ENST00000605401 106 ntBASIC5□□□□□ -1.61
SF3A1Q15459 AL354950.2-201ENST00000617939 290 ntBASIC5□□□□□ -1.61
SF3A1Q15459 AP005019.3-201ENST00000620418 560 ntBASIC5□□□□□ -1.61
SF3A1Q15459 AL356321.1-201ENST00000621360 228 ntBASIC5□□□□□ -1.61
SF3A1Q15459 AC019278.1-201ENST00000623516 479 ntBASIC5□□□□□ -1.61
SF3A1Q15459 ABBA01000935.2-201ENST00000637477 838 ntBASIC5□□□□□ -1.61
SF3A1Q15459 MIR1321-201ENST00000637766 79 ntBASIC5□□□□□ -1.61
SF3A1Q15459 RAD17P1-201ENST00000418130 2042 ntBASIC5□□□□□ -1.61
SF3A1Q15459 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
SF3A1Q15459 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SF3A1Q15459 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SF3A1Q15459 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SF3A1Q15459 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SF3A1Q15459 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC5□□□□□ -1.61
SF3A1Q15459 AC008568.2-201ENST00000623862 2313 ntBASIC5□□□□□ -1.61
SF3A1Q15459 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5□□□□□ -1.61
SF3A1Q15459 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.99□□□□□ -1.61
SF3A1Q15459 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SF3A1Q15459 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
SF3A1Q15459 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
SF3A1Q15459 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
SF3A1Q15459 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
SF3A1Q15459 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.99□□□□□ -1.61
SF3A1Q15459 AC079741.1-201ENST00000321498 212 ntBASIC4.99□□□□□ -1.61
SF3A1Q15459 RNU6-288P-201ENST00000363690 104 ntBASIC4.99□□□□□ -1.61
SF3A1Q15459 MIR3065-201ENST00000390137 79 ntBASIC4.99□□□□□ -1.61
SF3A1Q15459 ZNF90P2-204ENST00000419323 1075 ntBASIC4.99□□□□□ -1.61
SF3A1Q15459 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.99□□□□□ -1.61
SF3A1Q15459 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.99□□□□□ -1.61
SF3A1Q15459 ARL2BPP10-201ENST00000446487 531 ntBASIC4.99□□□□□ -1.61
SF3A1Q15459 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.99□□□□□ -1.61
SF3A1Q15459 AL121877.1-201ENST00000453704 622 ntBASIC4.99□□□□□ -1.61
SF3A1Q15459 AL356010.1-201ENST00000456364 102 ntBASIC4.99□□□□□ -1.61
SF3A1Q15459 RPL9P32-201ENST00000464118 620 ntBASIC4.99□□□□□ -1.61
SF3A1Q15459 RPL35AP15-201ENST00000468042 339 ntBASIC4.99□□□□□ -1.61
SF3A1Q15459 MTCO3P38-201ENST00000468910 766 ntBASIC4.99□□□□□ -1.61
SF3A1Q15459 AC233702.1-201ENST00000482905 502 ntBASIC4.99□□□□□ -1.61
SF3A1Q15459 RPL36AP51-201ENST00000487216 318 ntBASIC4.99□□□□□ -1.61
SF3A1Q15459 RNU6-677P-201ENST00000516914 101 ntBASIC4.99□□□□□ -1.61
SF3A1Q15459 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.99□□□□□ -1.61
SF3A1Q15459 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.99□□□□□ -1.61
SF3A1Q15459 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SF3A1Q15459 OR5B19P-201ENST00000531766 928 ntBASIC4.99□□□□□ -1.61
SF3A1Q15459 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.99□□□□□ -1.61
SF3A1Q15459 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.99□□□□□ -1.61
SF3A1Q15459 AC008752.3-201ENST00000588113 712 ntBASIC4.99□□□□□ -1.61
SF3A1Q15459 AL162413.1-201ENST00000603198 110 ntBASIC4.99□□□□□ -1.61
SF3A1Q15459 AC079587.1-201ENST00000603846 277 ntBASIC4.99□□□□□ -1.61
SF3A1Q15459 AC104763.2-201ENST00000604179 382 ntBASIC4.99□□□□□ -1.61
SF3A1Q15459 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
SF3A1Q15459 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC4.99□□□□□ -1.61
SF3A1Q15459 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
SF3A1Q15459 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SF3A1Q15459 API5P2-201ENST00000397055 1498 ntBASIC4.99□□□□□ -1.61
SF3A1Q15459 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
SF3A1Q15459 MARK2P15-201ENST00000432204 2186 ntBASIC4.98□□□□□ -1.61
SF3A1Q15459 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.98□□□□□ -1.61
SF3A1Q15459 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
SF3A1Q15459 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.98□□□□□ -1.61
SF3A1Q15459 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.98□□□□□ -1.61
SF3A1Q15459 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SF3A1Q15459 SNORD66.1-201ENST00000391230 76 ntBASIC4.98□□□□□ -1.61
SF3A1Q15459 HSPE1P8-201ENST00000406997 288 ntBASIC4.98□□□□□ -1.61
SF3A1Q15459 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.98□□□□□ -1.61
SF3A1Q15459 TMSB10P2-201ENST00000416049 131 ntBASIC4.98□□□□□ -1.61
SF3A1Q15459 YPEL5P1-201ENST00000419731 367 ntBASIC4.98□□□□□ -1.61
SF3A1Q15459 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.98□□□□□ -1.61
SF3A1Q15459 MTND4P25-201ENST00000441039 533 ntBASIC4.98□□□□□ -1.61
SF3A1Q15459 AC016691.1-201ENST00000441321 413 ntBASIC4.98□□□□□ -1.61
SF3A1Q15459 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.98□□□□□ -1.61
SF3A1Q15459 RNU6-953P-201ENST00000459154 107 ntBASIC4.98□□□□□ -1.61
SF3A1Q15459 RNU6-261P-201ENST00000459506 102 ntBASIC4.98□□□□□ -1.61
SF3A1Q15459 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.98□□□□□ -1.61
SF3A1Q15459 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.98□□□□□ -1.61
SF3A1Q15459 AC006499.6-201ENST00000511169 607 ntBASIC4.98□□□□□ -1.61
SF3A1Q15459 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.98□□□□□ -1.61
SF3A1Q15459 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.98□□□□□ -1.61
SF3A1Q15459 SNORA40.12-201ENST00000516329 111 ntBASIC4.98□□□□□ -1.61
SF3A1Q15459 RN7SKP60-201ENST00000516985 239 ntBASIC4.98□□□□□ -1.61
SF3A1Q15459 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC4.98□□□□□ -1.61
SF3A1Q15459 RANP9-201ENST00000519957 271 ntBASIC4.98□□□□□ -1.61
SF3A1Q15459 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.98□□□□□ -1.61
SF3A1Q15459 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.98□□□□□ -1.61
SF3A1Q15459 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.98□□□□□ -1.61
SF3A1Q15459 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.98□□□□□ -1.61
SF3A1Q15459 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.98□□□□□ -1.61
SF3A1Q15459 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.98□□□□□ -1.61
SF3A1Q15459 AC068135.2-201ENST00000569293 1028 ntBASIC4.98□□□□□ -1.61
SF3A1Q15459 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.98□□□□□ -1.61
SF3A1Q15459 AC068790.4-201ENST00000602474 263 ntBASIC4.98□□□□□ -1.61
SF3A1Q15459 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.98□□□□□ -1.61
SF3A1Q15459 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.98□□□□□ -1.61
SF3A1Q15459 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
SF3A1Q15459 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.98□□□□□ -1.61
SF3A1Q15459 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms