Protein–RNA interactions for Protein: Q00059

TFAM, Transcription factor A, mitochondrial, humanhuman

Known RBP Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFAMQ00059 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.13□□□□□ -2.07
TFAMQ00059 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
TFAMQ00059 MED28P6-201ENST00000558776 231 ntBASIC2.13□□□□□ -2.07
TFAMQ00059 HMGB1P24-202ENST00000615653 685 ntBASIC2.13□□□□□ -2.07
TFAMQ00059 AC090116.1-201ENST00000615679 446 ntBASIC2.13□□□□□ -2.07
TFAMQ00059 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.13□□□□□ -2.07
TFAMQ00059 AL022578.1-201ENST00000439330 1433 ntBASIC2.13□□□□□ -2.07
TFAMQ00059 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
TFAMQ00059 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
TFAMQ00059 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
TFAMQ00059 AL513185.3-201ENST00000433335 1300 ntBASIC2.13□□□□□ -2.07
TFAMQ00059 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
TFAMQ00059 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
TFAMQ00059 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.12□□□□□ -2.07
TFAMQ00059 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.12□□□□□ -2.07
TFAMQ00059 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.12□□□□□ -2.07
TFAMQ00059 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.12□□□□□ -2.07
TFAMQ00059 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.12□□□□□ -2.07
TFAMQ00059 RNU6-670P-201ENST00000364312 104 ntBASIC2.12□□□□□ -2.07
TFAMQ00059 RN7SKP226-201ENST00000364912 300 ntBASIC2.12□□□□□ -2.07
TFAMQ00059 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
TFAMQ00059 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
TFAMQ00059 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.12□□□□□ -2.07
TFAMQ00059 RN7SKP284-201ENST00000411002 343 ntBASIC2.12□□□□□ -2.07
TFAMQ00059 RPS3AP9-201ENST00000417027 792 ntBASIC2.12□□□□□ -2.07
TFAMQ00059 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC2.12□□□□□ -2.07
TFAMQ00059 AL121890.1-201ENST00000435457 205 ntBASIC2.12□□□□□ -2.07
TFAMQ00059 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.12□□□□□ -2.07
TFAMQ00059 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.12□□□□□ -2.07
TFAMQ00059 IFNA11P-201ENST00000446352 526 ntBASIC2.12□□□□□ -2.07
TFAMQ00059 RNU6-717P-201ENST00000459076 104 ntBASIC2.12□□□□□ -2.07
TFAMQ00059 snoU13.15-201ENST00000459407 104 ntBASIC2.12□□□□□ -2.07
TFAMQ00059 snoU13.26-201ENST00000459452 105 ntBASIC2.12□□□□□ -2.07
TFAMQ00059 AC068587.2-201ENST00000478386 781 ntBASIC2.12□□□□□ -2.07
TFAMQ00059 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC2.12□□□□□ -2.07
TFAMQ00059 AC090255.1-201ENST00000495779 349 ntBASIC2.12□□□□□ -2.07
TFAMQ00059 EIF4EP3-201ENST00000498782 656 ntBASIC2.12□□□□□ -2.07
TFAMQ00059 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.12□□□□□ -2.07
TFAMQ00059 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.12□□□□□ -2.07
TFAMQ00059 AP000916.1-201ENST00000533869 835 ntBASIC2.12□□□□□ -2.07
TFAMQ00059 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.12□□□□□ -2.07
TFAMQ00059 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.12□□□□□ -2.07
TFAMQ00059 RPS3AP23-202ENST00000574601 686 ntBASIC2.12□□□□□ -2.07
TFAMQ00059 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.12□□□□□ -2.07
TFAMQ00059 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.12□□□□□ -2.07
TFAMQ00059 AC245884.12-201ENST00000615364 59 ntBASIC2.12□□□□□ -2.07
TFAMQ00059 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.12□□□□□ -2.07
TFAMQ00059 RNU4-74P-201ENST00000411280 161 ntBASIC2.11□□□□□ -2.07
TFAMQ00059 AL513331.1-201ENST00000411908 397 ntBASIC2.11□□□□□ -2.07
TFAMQ00059 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.11□□□□□ -2.07
TFAMQ00059 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.11□□□□□ -2.07
TFAMQ00059 AC099677.1-201ENST00000420575 175 ntBASIC2.11□□□□□ -2.07
TFAMQ00059 ARL2BPP3-201ENST00000421226 480 ntBASIC2.11□□□□□ -2.07
TFAMQ00059 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.11□□□□□ -2.07
TFAMQ00059 PGBD4P3-201ENST00000440731 581 ntBASIC2.11□□□□□ -2.07
TFAMQ00059 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC2.11□□□□□ -2.07
TFAMQ00059 RPL23AP23-201ENST00000452590 471 ntBASIC2.11□□□□□ -2.07
TFAMQ00059 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.11□□□□□ -2.07
TFAMQ00059 MTAPP1-201ENST00000489154 819 ntBASIC2.11□□□□□ -2.07
TFAMQ00059 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.11□□□□□ -2.07
TFAMQ00059 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.11□□□□□ -2.07
TFAMQ00059 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.11□□□□□ -2.07
TFAMQ00059 RPS15AP11-201ENST00000594193 385 ntBASIC2.11□□□□□ -2.07
TFAMQ00059 AL356280.1-201ENST00000603614 379 ntBASIC2.11□□□□□ -2.07
TFAMQ00059 AC136601.2-201ENST00000604356 474 ntBASIC2.11□□□□□ -2.07
TFAMQ00059 AC138473.1-201ENST00000605717 526 ntBASIC2.11□□□□□ -2.07
TFAMQ00059 AC092954.1-201ENST00000609121 445 ntBASIC2.11□□□□□ -2.07
TFAMQ00059 AC103710.2-201ENST00000609912 942 ntBASIC2.11□□□□□ -2.07
TFAMQ00059 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.11□□□□□ -2.07
TFAMQ00059 AC244517.12-201ENST00000623581 663 ntBASIC2.11□□□□□ -2.07
TFAMQ00059 MIR203B-201ENST00000636080 86 ntBASIC2.11□□□□□ -2.07
TFAMQ00059 AC092881.1-201ENST00000638218 2733 ntBASIC2.11□□□□□ -2.07
TFAMQ00059 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.1□□□□□ -2.07
TFAMQ00059 SNORA38-201ENST00000363946 132 ntBASIC2.1□□□□□ -2.07
TFAMQ00059 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
TFAMQ00059 SNORA6-201ENST00000384033 151 ntBASIC2.1□□□□□ -2.07
TFAMQ00059 AL513475.1-201ENST00000406602 315 ntBASIC2.1□□□□□ -2.07
TFAMQ00059 RNU2-20P-201ENST00000410425 191 ntBASIC2.1□□□□□ -2.07
TFAMQ00059 HMGB3P2-201ENST00000411913 584 ntBASIC2.1□□□□□ -2.07
TFAMQ00059 AC233981.1-201ENST00000423224 461 ntBASIC2.1□□□□□ -2.07
TFAMQ00059 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.1□□□□□ -2.07
TFAMQ00059 CBWD4P-201ENST00000445695 655 ntBASIC2.1□□□□□ -2.07
TFAMQ00059 WASF1P1-201ENST00000447560 1131 ntBASIC2.1□□□□□ -2.07
TFAMQ00059 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.1□□□□□ -2.07
TFAMQ00059 TRBV1-201ENST00000476502 284 ntBASIC2.1□□□□□ -2.07
TFAMQ00059 AC072039.1-201ENST00000477611 581 ntBASIC2.1□□□□□ -2.07
TFAMQ00059 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.1□□□□□ -2.07
TFAMQ00059 AC008427.1-201ENST00000503102 655 ntBASIC2.1□□□□□ -2.07
TFAMQ00059 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.1□□□□□ -2.07
TFAMQ00059 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC2.1□□□□□ -2.07
TFAMQ00059 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.1□□□□□ -2.07
TFAMQ00059 AC090888.1-201ENST00000561335 1141 ntBASIC2.1□□□□□ -2.07
TFAMQ00059 AC009127.3-201ENST00000570531 403 ntBASIC2.1□□□□□ -2.07
TFAMQ00059 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.1□□□□□ -2.07
TFAMQ00059 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.1□□□□□ -2.07
TFAMQ00059 AC027309.3-201ENST00000623419 351 ntBASIC2.1□□□□□ -2.07
TFAMQ00059 AC068620.4-201ENST00000636730 1182 ntBASIC2.1□□□□□ -2.07
TFAMQ00059 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.1□□□□□ -2.07
TFAMQ00059 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.1□□□□□ -2.07
TFAMQ00059 HMGB1P5-201ENST00000255320 642 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms