Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 ZNF519P3-201ENST00000557158 1032 ntBASIC3.79□□□□□ -1.8
HDAC4P56524 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.79□□□□□ -1.8
HDAC4P56524 AC005771.1-201ENST00000585581 349 ntBASIC3.79□□□□□ -1.8
HDAC4P56524 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.79□□□□□ -1.8
HDAC4P56524 TPMTP1-201ENST00000592307 737 ntBASIC3.79□□□□□ -1.8
HDAC4P56524 AC092354.2-201ENST00000607786 514 ntBASIC3.79□□□□□ -1.8
HDAC4P56524 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.79□□□□□ -1.8
HDAC4P56524 AC138749.5-201ENST00000611461 208 ntBASIC3.79□□□□□ -1.8
HDAC4P56524 AC013562.2-201ENST00000611632 603 ntBASIC3.79□□□□□ -1.8
HDAC4P56524 AC116165.2-201ENST00000616705 206 ntBASIC3.79□□□□□ -1.8
HDAC4P56524 AC039056.2-201ENST00000622261 511 ntBASIC3.79□□□□□ -1.8
HDAC4P56524 AL732618.1-201ENST00000623251 301 ntBASIC3.79□□□□□ -1.8
HDAC4P56524 AC007656.2-201ENST00000624902 4547 ntBASIC3.79□□□□□ -1.8
HDAC4P56524 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
HDAC4P56524 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
HDAC4P56524 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HDAC4P56524 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HDAC4P56524 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HDAC4P56524 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.78□□□□□ -1.8
HDAC4P56524 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HDAC4P56524 AL672296.1-201ENST00000427780 2158 ntBASIC3.78□□□□□ -1.8
HDAC4P56524 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.78□□□□□ -1.8
HDAC4P56524 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
HDAC4P56524 RNA5SP124-201ENST00000362739 110 ntBASIC3.78□□□□□ -1.8
HDAC4P56524 RNU6-533P-201ENST00000384144 107 ntBASIC3.78□□□□□ -1.8
HDAC4P56524 Y_RNA.505-201ENST00000384489 102 ntBASIC3.78□□□□□ -1.8
HDAC4P56524 MIR634-201ENST00000385208 97 ntBASIC3.78□□□□□ -1.8
HDAC4P56524 RPS20P2-201ENST00000402520 389 ntBASIC3.78□□□□□ -1.8
HDAC4P56524 AL391417.1-201ENST00000404100 426 ntBASIC3.78□□□□□ -1.8
HDAC4P56524 RNU2-47P-201ENST00000410649 186 ntBASIC3.78□□□□□ -1.8
HDAC4P56524 AL663109.1-201ENST00000411498 844 ntBASIC3.78□□□□□ -1.8
HDAC4P56524 HMGN1P14-201ENST00000412459 517 ntBASIC3.78□□□□□ -1.8
HDAC4P56524 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HDAC4P56524 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.78□□□□□ -1.8
HDAC4P56524 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.78□□□□□ -1.8
HDAC4P56524 AL137014.1-201ENST00000420490 1226 ntBASIC3.78□□□□□ -1.8
HDAC4P56524 GOT2P5-201ENST00000433995 546 ntBASIC3.78□□□□□ -1.8
HDAC4P56524 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.78□□□□□ -1.8
HDAC4P56524 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
HDAC4P56524 PGBD4P3-201ENST00000440731 581 ntBASIC3.78□□□□□ -1.8
HDAC4P56524 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.78□□□□□ -1.8
HDAC4P56524 AL590365.1-201ENST00000450788 243 ntBASIC3.78□□□□□ -1.8
HDAC4P56524 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.78□□□□□ -1.8
HDAC4P56524 SNORD42A-201ENST00000459584 64 ntBASIC3.78□□□□□ -1.8
HDAC4P56524 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.78□□□□□ -1.8
HDAC4P56524 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.78□□□□□ -1.8
HDAC4P56524 MLLT10P2-201ENST00000506434 249 ntBASIC3.78□□□□□ -1.8
HDAC4P56524 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.78□□□□□ -1.8
HDAC4P56524 RNU6-1003P-201ENST00000517099 105 ntBASIC3.78□□□□□ -1.8
HDAC4P56524 IGKV2D-19-201ENST00000523346 262 ntBASIC3.78□□□□□ -1.8
HDAC4P56524 AP003122.4-201ENST00000530980 758 ntBASIC3.78□□□□□ -1.8
HDAC4P56524 CR383656.7-201ENST00000548164 174 ntBASIC3.78□□□□□ -1.8
HDAC4P56524 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.78□□□□□ -1.8
HDAC4P56524 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.78□□□□□ -1.8
HDAC4P56524 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.78□□□□□ -1.8
HDAC4P56524 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.78□□□□□ -1.8
HDAC4P56524 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.78□□□□□ -1.8
HDAC4P56524 AL121576.1-201ENST00000556055 276 ntBASIC3.78□□□□□ -1.8
HDAC4P56524 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.78□□□□□ -1.8
HDAC4P56524 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.78□□□□□ -1.8
HDAC4P56524 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.78□□□□□ -1.8
HDAC4P56524 AC087683.1-201ENST00000591187 441 ntBASIC3.78□□□□□ -1.8
HDAC4P56524 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.78□□□□□ -1.8
HDAC4P56524 AL031176.1-201ENST00000604554 466 ntBASIC3.78□□□□□ -1.8
HDAC4P56524 AL590240.3-201ENST00000621416 943 ntBASIC3.78□□□□□ -1.8
HDAC4P56524 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
HDAC4P56524 AL732372.2-225ENST00000642124 456 ntBASIC3.78□□□□□ -1.8
HDAC4P56524 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HDAC4P56524 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
HDAC4P56524 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HDAC4P56524 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HDAC4P56524 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HDAC4P56524 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.78□□□□□ -1.8
HDAC4P56524 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.77□□□□□ -1.81
HDAC4P56524 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
HDAC4P56524 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
HDAC4P56524 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
HDAC4P56524 RNA5SP42-201ENST00000364278 115 ntBASIC3.77□□□□□ -1.81
HDAC4P56524 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
HDAC4P56524 Y_RNA.608-201ENST00000410647 95 ntBASIC3.77□□□□□ -1.81
HDAC4P56524 RNU2-16P-201ENST00000410712 136 ntBASIC3.77□□□□□ -1.81
HDAC4P56524 RPS15AP6-201ENST00000420703 385 ntBASIC3.77□□□□□ -1.81
HDAC4P56524 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.77□□□□□ -1.81
HDAC4P56524 USP9YP12-201ENST00000450481 570 ntBASIC3.77□□□□□ -1.81
HDAC4P56524 AC104308.1-201ENST00000454621 333 ntBASIC3.77□□□□□ -1.81
HDAC4P56524 SNRPFP4-201ENST00000456366 242 ntBASIC3.77□□□□□ -1.81
HDAC4P56524 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.77□□□□□ -1.81
HDAC4P56524 HMGN2P16-201ENST00000456802 261 ntBASIC3.77□□□□□ -1.81
HDAC4P56524 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC3.77□□□□□ -1.81
HDAC4P56524 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HDAC4P56524 HMGB3P15-201ENST00000507326 574 ntBASIC3.77□□□□□ -1.81
HDAC4P56524 RANP9-201ENST00000519957 271 ntBASIC3.77□□□□□ -1.81
HDAC4P56524 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.77□□□□□ -1.81
HDAC4P56524 AC018630.1-201ENST00000541376 925 ntBASIC3.77□□□□□ -1.81
HDAC4P56524 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.77□□□□□ -1.81
HDAC4P56524 RPL21P12-201ENST00000559810 515 ntBASIC3.77□□□□□ -1.81
HDAC4P56524 MIR4528-201ENST00000577763 90 ntBASIC3.77□□□□□ -1.81
HDAC4P56524 MTND1P15-201ENST00000579262 949 ntBASIC3.77□□□□□ -1.81
HDAC4P56524 AC011451.2-201ENST00000604303 598 ntBASIC3.77□□□□□ -1.81
HDAC4P56524 AC112191.3-201ENST00000604371 277 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms