Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AL049745.1-201ENST00000433953 286 ntBASIC4.43□□□□□ -1.7
GFRA1P56159 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.43□□□□□ -1.7
GFRA1P56159 RPL7P28-201ENST00000437739 740 ntBASIC4.43□□□□□ -1.7
GFRA1P56159 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.43□□□□□ -1.7
GFRA1P56159 AC000111.2-201ENST00000448200 210 ntBASIC4.43□□□□□ -1.7
GFRA1P56159 HMGB3P22-202ENST00000451823 572 ntBASIC4.43□□□□□ -1.7
GFRA1P56159 AURKAPS2-201ENST00000454983 333 ntBASIC4.43□□□□□ -1.7
GFRA1P56159 ELOCP24-201ENST00000456370 334 ntBASIC4.43□□□□□ -1.7
GFRA1P56159 AC010285.1-201ENST00000470580 392 ntBASIC4.43□□□□□ -1.7
GFRA1P56159 AL049874.1-201ENST00000489560 388 ntBASIC4.43□□□□□ -1.7
GFRA1P56159 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.43□□□□□ -1.7
GFRA1P56159 RNU6-1016P-201ENST00000516689 94 ntBASIC4.43□□□□□ -1.7
GFRA1P56159 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.43□□□□□ -1.7
GFRA1P56159 IGKV2D-23-201ENST00000518179 286 ntBASIC4.43□□□□□ -1.7
GFRA1P56159 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
GFRA1P56159 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.43□□□□□ -1.7
GFRA1P56159 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.43□□□□□ -1.7
GFRA1P56159 SNRPGP18-201ENST00000553000 214 ntBASIC4.43□□□□□ -1.7
GFRA1P56159 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.43□□□□□ -1.7
GFRA1P56159 AC022968.1-201ENST00000567372 442 ntBASIC4.43□□□□□ -1.7
GFRA1P56159 SNORD91B-202ENST00000608459 222 ntBASIC4.43□□□□□ -1.7
GFRA1P56159 AC100827.5-201ENST00000615883 426 ntBASIC4.43□□□□□ -1.7
GFRA1P56159 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.43□□□□□ -1.7
GFRA1P56159 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.43□□□□□ -1.7
GFRA1P56159 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.43□□□□□ -1.7
GFRA1P56159 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
GFRA1P56159 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.43□□□□□ -1.7
GFRA1P56159 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.43□□□□□ -1.7
GFRA1P56159 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
GFRA1P56159 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.43□□□□□ -1.7
GFRA1P56159 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
GFRA1P56159 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
GFRA1P56159 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.43□□□□□ -1.7
GFRA1P56159 AL136964.1-201ENST00000622038 2990 ntBASIC4.42□□□□□ -1.7
GFRA1P56159 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
GFRA1P56159 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
GFRA1P56159 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.42□□□□□ -1.7
GFRA1P56159 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.42□□□□□ -1.7
GFRA1P56159 AC004817.4-201ENST00000602396 3625 ntBASIC4.42□□□□□ -1.7
GFRA1P56159 SNORA33.2-201ENST00000365413 134 ntBASIC4.42□□□□□ -1.7
GFRA1P56159 RNU6-214P-201ENST00000384130 107 ntBASIC4.42□□□□□ -1.7
GFRA1P56159 RNU6-1160P-201ENST00000384546 104 ntBASIC4.42□□□□□ -1.7
GFRA1P56159 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
GFRA1P56159 RNA5SP113-201ENST00000410486 84 ntBASIC4.42□□□□□ -1.7
GFRA1P56159 AC245054.2-201ENST00000415639 319 ntBASIC4.42□□□□□ -1.7
GFRA1P56159 TBCAP2-201ENST00000416175 326 ntBASIC4.42□□□□□ -1.7
GFRA1P56159 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.42□□□□□ -1.7
GFRA1P56159 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.42□□□□□ -1.7
GFRA1P56159 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.42□□□□□ -1.7
GFRA1P56159 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.42□□□□□ -1.7
GFRA1P56159 AC025164.1-201ENST00000496249 478 ntBASIC4.42□□□□□ -1.7
GFRA1P56159 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
GFRA1P56159 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.42□□□□□ -1.7
GFRA1P56159 AC002456.2-201ENST00000509356 380 ntBASIC4.42□□□□□ -1.7
GFRA1P56159 AC116337.1-201ENST00000509680 687 ntBASIC4.42□□□□□ -1.7
GFRA1P56159 RNU6-513P-201ENST00000516104 104 ntBASIC4.42□□□□□ -1.7
GFRA1P56159 RNU4ATAC7P-201ENST00000516280 125 ntBASIC4.42□□□□□ -1.7
GFRA1P56159 RNU1-54P-201ENST00000517181 120 ntBASIC4.42□□□□□ -1.7
GFRA1P56159 SNRPGP16-201ENST00000533275 226 ntBASIC4.42□□□□□ -1.7
GFRA1P56159 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.42□□□□□ -1.7
GFRA1P56159 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.42□□□□□ -1.7
GFRA1P56159 MIR3667-201ENST00000581025 74 ntBASIC4.42□□□□□ -1.7
GFRA1P56159 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.42□□□□□ -1.7
GFRA1P56159 AC016925.2-201ENST00000605108 242 ntBASIC4.42□□□□□ -1.7
GFRA1P56159 AC107294.1-201ENST00000609524 467 ntBASIC4.42□□□□□ -1.7
GFRA1P56159 MIR6128-201ENST00000615528 109 ntBASIC4.42□□□□□ -1.7
GFRA1P56159 AC098657.3-201ENST00000620434 263 ntBASIC4.42□□□□□ -1.7
GFRA1P56159 AL360181.4-201ENST00000621752 134 ntBASIC4.42□□□□□ -1.7
GFRA1P56159 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.42□□□□□ -1.7
GFRA1P56159 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.42□□□□□ -1.7
GFRA1P56159 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
GFRA1P56159 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
GFRA1P56159 SDAD1P1-202ENST00000524156 2051 ntBASIC4.42□□□□□ -1.7
GFRA1P56159 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.42□□□□□ -1.7
GFRA1P56159 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
GFRA1P56159 AC063976.2-201ENST00000425667 3556 ntBASIC4.42□□□□□ -1.7
GFRA1P56159 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
GFRA1P56159 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
GFRA1P56159 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
GFRA1P56159 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
GFRA1P56159 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
GFRA1P56159 MTND5P19-201ENST00000424872 1794 ntBASIC4.41□□□□□ -1.7
GFRA1P56159 RNA5SP52-201ENST00000362448 134 ntBASIC4.41□□□□□ -1.7
GFRA1P56159 RNU4-44P-201ENST00000363050 141 ntBASIC4.41□□□□□ -1.7
GFRA1P56159 RNU6-1181P-201ENST00000384191 106 ntBASIC4.41□□□□□ -1.7
GFRA1P56159 MIR585-201ENST00000384887 94 ntBASIC4.41□□□□□ -1.7
GFRA1P56159 MIR514A1-201ENST00000385133 98 ntBASIC4.41□□□□□ -1.7
GFRA1P56159 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
GFRA1P56159 AL357515.1-201ENST00000402967 542 ntBASIC4.41□□□□□ -1.7
GFRA1P56159 RPL21P90-201ENST00000415692 466 ntBASIC4.41□□□□□ -1.7
GFRA1P56159 E2F6P2-201ENST00000420708 748 ntBASIC4.41□□□□□ -1.7
GFRA1P56159 AL359672.1-201ENST00000442302 409 ntBASIC4.41□□□□□ -1.7
GFRA1P56159 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.41□□□□□ -1.7
GFRA1P56159 FGF7P3-201ENST00000454645 303 ntBASIC4.41□□□□□ -1.7
GFRA1P56159 AC087588.1-201ENST00000462203 316 ntBASIC4.41□□□□□ -1.7
GFRA1P56159 RN7SL517P-201ENST00000462240 305 ntBASIC4.41□□□□□ -1.7
GFRA1P56159 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.41□□□□□ -1.7
GFRA1P56159 AC087884.1-201ENST00000469738 328 ntBASIC4.41□□□□□ -1.7
GFRA1P56159 IGLV2-34-201ENST00000490007 283 ntBASIC4.41□□□□□ -1.7
GFRA1P56159 RPS23P1-201ENST00000491662 432 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms