Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 AC005951.2-201ENST00000576282 495 ntBASIC5.32□□□□□ -1.56
EPHA4P54764 AC060780.2-201ENST00000589047 198 ntBASIC5.32□□□□□ -1.56
EPHA4P54764 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.32□□□□□ -1.56
EPHA4P54764 AL162431.4-201ENST00000604674 411 ntBASIC5.32□□□□□ -1.56
EPHA4P54764 TEX41-280ENST00000629185 591 ntTSL 5 BASIC5.32□□□□□ -1.56
EPHA4P54764 AC074101.1-201ENST00000637861 241 ntBASIC5.32□□□□□ -1.56
EPHA4P54764 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
EPHA4P54764 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
EPHA4P54764 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.32□□□□□ -1.56
EPHA4P54764 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
EPHA4P54764 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
EPHA4P54764 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
EPHA4P54764 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
EPHA4P54764 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
EPHA4P54764 MTND5P9-201ENST00000503854 1755 ntBASIC5.32□□□□□ -1.56
EPHA4P54764 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
EPHA4P54764 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
EPHA4P54764 AC239868.2-201ENST00000564237 4527 ntBASIC5.31□□□□□ -1.56
EPHA4P54764 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
EPHA4P54764 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC5.31□□□□□ -1.56
EPHA4P54764 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
EPHA4P54764 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
EPHA4P54764 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
EPHA4P54764 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
EPHA4P54764 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
EPHA4P54764 AC004076.2-201ENST00000620532 3323 ntBASIC5.31□□□□□ -1.56
EPHA4P54764 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC5.31□□□□□ -1.56
EPHA4P54764 RNA5SP339-201ENST00000390987 122 ntBASIC5.31□□□□□ -1.56
EPHA4P54764 AL513331.1-201ENST00000411908 397 ntBASIC5.31□□□□□ -1.56
EPHA4P54764 AL133482.1-201ENST00000415988 498 ntBASIC5.31□□□□□ -1.56
EPHA4P54764 EI24P1-201ENST00000416584 867 ntBASIC5.31□□□□□ -1.56
EPHA4P54764 AF186996.5-201ENST00000418098 904 ntBASIC5.31□□□□□ -1.56
EPHA4P54764 TOMM20P4-201ENST00000427861 435 ntBASIC5.31□□□□□ -1.56
EPHA4P54764 C4BPAP2-201ENST00000428434 478 ntBASIC5.31□□□□□ -1.56
EPHA4P54764 AL592045.1-201ENST00000429867 352 ntBASIC5.31□□□□□ -1.56
EPHA4P54764 AC093414.1-201ENST00000434712 514 ntBASIC5.31□□□□□ -1.56
EPHA4P54764 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC5.31□□□□□ -1.56
EPHA4P54764 HSPD1P21-201ENST00000436541 245 ntBASIC5.31□□□□□ -1.56
EPHA4P54764 AC004383.1-201ENST00000438135 289 ntBASIC5.31□□□□□ -1.56
EPHA4P54764 RPS11P7-201ENST00000442125 465 ntBASIC5.31□□□□□ -1.56
EPHA4P54764 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.31□□□□□ -1.56
EPHA4P54764 AC110792.1-201ENST00000491826 472 ntBASIC5.31□□□□□ -1.56
EPHA4P54764 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.31□□□□□ -1.56
EPHA4P54764 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC5.31□□□□□ -1.56
EPHA4P54764 SCARNA16.4-201ENST00000516956 187 ntBASIC5.31□□□□□ -1.56
EPHA4P54764 SNORA81.3-201ENST00000517283 198 ntBASIC5.31□□□□□ -1.56
EPHA4P54764 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.31□□□□□ -1.56
EPHA4P54764 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.31□□□□□ -1.56
EPHA4P54764 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.31□□□□□ -1.56
EPHA4P54764 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC5.31□□□□□ -1.56
EPHA4P54764 MIR1273C-201ENST00000578669 77 ntBASIC5.31□□□□□ -1.56
EPHA4P54764 MIR4443-201ENST00000585052 53 ntBASIC5.31□□□□□ -1.56
EPHA4P54764 AC211433.2-201ENST00000608433 387 ntBASIC5.31□□□□□ -1.56
EPHA4P54764 AC018445.2-201ENST00000622987 260 ntBASIC5.31□□□□□ -1.56
EPHA4P54764 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
EPHA4P54764 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
EPHA4P54764 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
EPHA4P54764 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.31□□□□□ -1.56
EPHA4P54764 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
EPHA4P54764 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.3□□□□□ -1.56
EPHA4P54764 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
EPHA4P54764 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
EPHA4P54764 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
EPHA4P54764 SDAD1P2-201ENST00000441308 2028 ntBASIC5.3□□□□□ -1.56
EPHA4P54764 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
EPHA4P54764 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.3□□□□□ -1.56
EPHA4P54764 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
EPHA4P54764 MIR133B-201ENST00000362210 119 ntBASIC5.3□□□□□ -1.56
EPHA4P54764 RNA5SP326-201ENST00000363209 110 ntBASIC5.3□□□□□ -1.56
EPHA4P54764 RNU6-1317P-201ENST00000364582 104 ntBASIC5.3□□□□□ -1.56
EPHA4P54764 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC5.3□□□□□ -1.56
EPHA4P54764 RN7SKP106-201ENST00000410832 272 ntBASIC5.3□□□□□ -1.56
EPHA4P54764 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.3□□□□□ -1.56
EPHA4P54764 AC016769.2-201ENST00000414815 475 ntBASIC5.3□□□□□ -1.56
EPHA4P54764 AL096701.2-201ENST00000416920 238 ntBASIC5.3□□□□□ -1.56
EPHA4P54764 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
EPHA4P54764 AL138785.1-201ENST00000425821 331 ntBASIC5.3□□□□□ -1.56
EPHA4P54764 AL159987.2-201ENST00000432754 307 ntBASIC5.3□□□□□ -1.56
EPHA4P54764 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC5.3□□□□□ -1.56
EPHA4P54764 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.3□□□□□ -1.56
EPHA4P54764 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC5.3□□□□□ -1.56
EPHA4P54764 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.3□□□□□ -1.56
EPHA4P54764 PRELID3BP1-201ENST00000457142 540 ntBASIC5.3□□□□□ -1.56
EPHA4P54764 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.3□□□□□ -1.56
EPHA4P54764 AC087588.1-201ENST00000462203 316 ntBASIC5.3□□□□□ -1.56
EPHA4P54764 RN7SL727P-201ENST00000482164 296 ntBASIC5.3□□□□□ -1.56
EPHA4P54764 SNORA31.6-201ENST00000516241 130 ntBASIC5.3□□□□□ -1.56
EPHA4P54764 HMGB1P40-201ENST00000525121 540 ntBASIC5.3□□□□□ -1.56
EPHA4P54764 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.3□□□□□ -1.56
EPHA4P54764 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.3□□□□□ -1.56
EPHA4P54764 AL157871.3-201ENST00000557231 293 ntBASIC5.3□□□□□ -1.56
EPHA4P54764 AL158827.2-201ENST00000602494 330 ntBASIC5.3□□□□□ -1.56
EPHA4P54764 AC138965.3-201ENST00000623875 498 ntBASIC5.3□□□□□ -1.56
EPHA4P54764 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.3□□□□□ -1.56
EPHA4P54764 AL691447.3-201ENST00000635020 330 ntBASIC5.3□□□□□ -1.56
EPHA4P54764 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
EPHA4P54764 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.3□□□□□ -1.56
EPHA4P54764 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
EPHA4P54764 AC083843.2-201ENST00000568248 6253 ntBASIC5.3□□□□□ -1.56
EPHA4P54764 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 149.3 ms