Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.56□□□□□ -1.84
CLCNKAP51800 SYF2P1-201ENST00000550658 413 ntBASIC3.56□□□□□ -1.84
CLCNKAP51800 SETP7-201ENST00000552169 453 ntBASIC3.56□□□□□ -1.84
CLCNKAP51800 RPL21P5-201ENST00000554662 472 ntBASIC3.56□□□□□ -1.84
CLCNKAP51800 AL157394.1-201ENST00000562983 1224 ntBASIC3.56□□□□□ -1.84
CLCNKAP51800 HMGN1P30-201ENST00000589286 268 ntBASIC3.56□□□□□ -1.84
CLCNKAP51800 AC010591.1-201ENST00000603941 649 ntBASIC3.56□□□□□ -1.84
CLCNKAP51800 NDUFA8P1-201ENST00000605525 367 ntBASIC3.56□□□□□ -1.84
CLCNKAP51800 AC011816.2-201ENST00000607089 556 ntBASIC3.56□□□□□ -1.84
CLCNKAP51800 OR10AB1P-201ENST00000609613 938 ntBASIC3.56□□□□□ -1.84
CLCNKAP51800 MIR8058-201ENST00000615737 89 ntBASIC3.56□□□□□ -1.84
CLCNKAP51800 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.56□□□□□ -1.84
CLCNKAP51800 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLCNKAP51800 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CLCNKAP51800 AC007823.1-201ENST00000569932 1566 ntBASIC3.55□□□□□ -1.84
CLCNKAP51800 MTND5P33-201ENST00000571250 1450 ntBASIC3.55□□□□□ -1.84
CLCNKAP51800 AL136164.4-201ENST00000625013 2135 ntBASIC3.55□□□□□ -1.84
CLCNKAP51800 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.55□□□□□ -1.84
CLCNKAP51800 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.55□□□□□ -1.84
CLCNKAP51800 SNORD9-201ENST00000362566 104 ntBASIC3.55□□□□□ -1.84
CLCNKAP51800 Y_RNA.41-201ENST00000362646 102 ntBASIC3.55□□□□□ -1.84
CLCNKAP51800 MIR670-201ENST00000390142 98 ntBASIC3.55□□□□□ -1.84
CLCNKAP51800 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CLCNKAP51800 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CLCNKAP51800 SNORD115.1-201ENST00000391109 76 ntBASIC3.55□□□□□ -1.84
CLCNKAP51800 RPS3AP36-201ENST00000398190 775 ntBASIC3.55□□□□□ -1.84
CLCNKAP51800 RNA5SP129-201ENST00000410276 118 ntBASIC3.55□□□□□ -1.84
CLCNKAP51800 Y_RNA.599-201ENST00000410489 109 ntBASIC3.55□□□□□ -1.84
CLCNKAP51800 MTCO3P12-201ENST00000416718 547 ntBASIC3.55□□□□□ -1.84
CLCNKAP51800 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.55□□□□□ -1.84
CLCNKAP51800 AC069157.1-201ENST00000421749 137 ntBASIC3.55□□□□□ -1.84
CLCNKAP51800 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.55□□□□□ -1.84
CLCNKAP51800 AC010975.2-201ENST00000427781 588 ntBASIC3.55□□□□□ -1.84
CLCNKAP51800 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC3.55□□□□□ -1.84
CLCNKAP51800 MTND6P13-201ENST00000443510 523 ntBASIC3.55□□□□□ -1.84
CLCNKAP51800 AC112653.1-201ENST00000443851 386 ntBASIC3.55□□□□□ -1.84
CLCNKAP51800 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.55□□□□□ -1.84
CLCNKAP51800 RPS24P6-201ENST00000452670 400 ntBASIC3.55□□□□□ -1.84
CLCNKAP51800 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.55□□□□□ -1.84
CLCNKAP51800 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.55□□□□□ -1.84
CLCNKAP51800 AL136097.1-201ENST00000456945 913 ntBASIC3.55□□□□□ -1.84
CLCNKAP51800 snoU109.4-201ENST00000458953 143 ntBASIC3.55□□□□□ -1.84
CLCNKAP51800 snoU13.24-201ENST00000458998 104 ntBASIC3.55□□□□□ -1.84
CLCNKAP51800 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.55□□□□□ -1.84
CLCNKAP51800 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.55□□□□□ -1.84
CLCNKAP51800 AC110768.1-201ENST00000509222 400 ntBASIC3.55□□□□□ -1.84
CLCNKAP51800 CDC42P4-201ENST00000510507 563 ntBASIC3.55□□□□□ -1.84
CLCNKAP51800 RNU6-720P-201ENST00000516363 108 ntBASIC3.55□□□□□ -1.84
CLCNKAP51800 AP003467.2-201ENST00000520175 319 ntBASIC3.55□□□□□ -1.84
CLCNKAP51800 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.55□□□□□ -1.84
CLCNKAP51800 AC022616.6-201ENST00000520479 119 ntBASIC3.55□□□□□ -1.84
CLCNKAP51800 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.55□□□□□ -1.84
CLCNKAP51800 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.55□□□□□ -1.84
CLCNKAP51800 AC123904.2-201ENST00000548059 300 ntBASIC3.55□□□□□ -1.84
CLCNKAP51800 CCNG2P1-201ENST00000549521 1000 ntBASIC3.55□□□□□ -1.84
CLCNKAP51800 AC009063.1-201ENST00000563342 702 ntBASIC3.55□□□□□ -1.84
CLCNKAP51800 AC137800.2-201ENST00000574375 120 ntBASIC3.55□□□□□ -1.84
CLCNKAP51800 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.55□□□□□ -1.84
CLCNKAP51800 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.55□□□□□ -1.84
CLCNKAP51800 BNIP3P33-201ENST00000598912 569 ntBASIC3.55□□□□□ -1.84
CLCNKAP51800 AC012669.1-201ENST00000603209 283 ntBASIC3.55□□□□□ -1.84
CLCNKAP51800 AL365503.1-201ENST00000605247 905 ntBASIC3.55□□□□□ -1.84
CLCNKAP51800 MIR92B-201ENST00000607575 96 ntBASIC3.55□□□□□ -1.84
CLCNKAP51800 AL391813.2-201ENST00000609113 322 ntBASIC3.55□□□□□ -1.84
CLCNKAP51800 MIR7851-201ENST00000610611 160 ntBASIC3.55□□□□□ -1.84
CLCNKAP51800 AP001506.1-201ENST00000615444 211 ntBASIC3.55□□□□□ -1.84
CLCNKAP51800 AC108479.2-201ENST00000617314 601 ntBASIC3.55□□□□□ -1.84
CLCNKAP51800 AC026585.1-201ENST00000619582 524 ntBASIC3.55□□□□□ -1.84
CLCNKAP51800 AC244258.1-201ENST00000637553 1071 ntBASIC3.55□□□□□ -1.84
CLCNKAP51800 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.55□□□□□ -1.84
CLCNKAP51800 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.55□□□□□ -1.84
CLCNKAP51800 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.55□□□□□ -1.84
CLCNKAP51800 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CLCNKAP51800 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.55□□□□□ -1.84
CLCNKAP51800 AC092447.7-201ENST00000422212 1621 ntBASIC3.55□□□□□ -1.84
CLCNKAP51800 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CLCNKAP51800 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
CLCNKAP51800 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CLCNKAP51800 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.54□□□□□ -1.84
CLCNKAP51800 AC002546.1-201ENST00000588041 2504 ntBASIC3.54□□□□□ -1.84
CLCNKAP51800 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CLCNKAP51800 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.54□□□□□ -1.84
CLCNKAP51800 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.54□□□□□ -1.84
CLCNKAP51800 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CLCNKAP51800 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.54□□□□□ -1.84
CLCNKAP51800 SNORA71.3-201ENST00000362582 128 ntBASIC3.54□□□□□ -1.84
CLCNKAP51800 RNU6-359P-201ENST00000365466 108 ntBASIC3.54□□□□□ -1.84
CLCNKAP51800 U3.20-201ENST00000390909 217 ntBASIC3.54□□□□□ -1.84
CLCNKAP51800 FCF1P10-201ENST00000407590 479 ntBASIC3.54□□□□□ -1.84
CLCNKAP51800 Y_RNA.619-201ENST00000410951 90 ntBASIC3.54□□□□□ -1.84
CLCNKAP51800 HMGB3P23-201ENST00000414981 585 ntBASIC3.54□□□□□ -1.84
CLCNKAP51800 SPA17P1-201ENST00000416656 452 ntBASIC3.54□□□□□ -1.84
CLCNKAP51800 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.54□□□□□ -1.84
CLCNKAP51800 RPL21P109-201ENST00000422213 475 ntBASIC3.54□□□□□ -1.84
CLCNKAP51800 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.54□□□□□ -1.84
CLCNKAP51800 AC108734.1-201ENST00000439549 399 ntBASIC3.54□□□□□ -1.84
CLCNKAP51800 RPL21P23-201ENST00000446654 460 ntBASIC3.54□□□□□ -1.84
CLCNKAP51800 AL358232.1-201ENST00000448030 501 ntBASIC3.54□□□□□ -1.84
CLCNKAP51800 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.54□□□□□ -1.84
CLCNKAP51800 RBMY2UP-201ENST00000453474 324 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms