Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 RPS15AP36-201ENST00000492022 382 ntBASIC4.2□□□□□ -1.74
TM4SF4P48230 AP001086.1-201ENST00000494882 321 ntBASIC4.2□□□□□ -1.74
TM4SF4P48230 AC093663.1-201ENST00000497190 394 ntBASIC4.2□□□□□ -1.74
TM4SF4P48230 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.2□□□□□ -1.74
TM4SF4P48230 AC079140.3-201ENST00000511111 550 ntBASIC4.2□□□□□ -1.74
TM4SF4P48230 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.2□□□□□ -1.74
TM4SF4P48230 SNORA31.8-201ENST00000516327 108 ntBASIC4.2□□□□□ -1.74
TM4SF4P48230 SNORA18.6-201ENST00000516792 115 ntBASIC4.2□□□□□ -1.74
TM4SF4P48230 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.2□□□□□ -1.74
TM4SF4P48230 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.2□□□□□ -1.74
TM4SF4P48230 MIR5680-201ENST00000577577 84 ntBASIC4.2□□□□□ -1.74
TM4SF4P48230 HMGN1P30-201ENST00000589286 268 ntBASIC4.2□□□□□ -1.74
TM4SF4P48230 AC079089.3-201ENST00000603094 673 ntBASIC4.2□□□□□ -1.74
TM4SF4P48230 AP000254.1-201ENST00000609934 520 ntBASIC4.2□□□□□ -1.74
TM4SF4P48230 TUG1_2.1-201ENST00000614234 87 ntBASIC4.2□□□□□ -1.74
TM4SF4P48230 AL591424.2-201ENST00000617023 128 ntBASIC4.2□□□□□ -1.74
TM4SF4P48230 AC072046.2-201ENST00000618366 268 ntBASIC4.2□□□□□ -1.74
TM4SF4P48230 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.2□□□□□ -1.74
TM4SF4P48230 PISRT1-201ENST00000626175 531 ntBASIC4.2□□□□□ -1.74
TM4SF4P48230 AC099654.13-201ENST00000639774 207 ntBASIC4.2□□□□□ -1.74
TM4SF4P48230 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TM4SF4P48230 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.2□□□□□ -1.74
TM4SF4P48230 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.2□□□□□ -1.74
TM4SF4P48230 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.2□□□□□ -1.74
TM4SF4P48230 AL672296.1-201ENST00000427780 2158 ntBASIC4.2□□□□□ -1.74
TM4SF4P48230 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
TM4SF4P48230 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
TM4SF4P48230 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TM4SF4P48230 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
TM4SF4P48230 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TM4SF4P48230 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.19□□□□□ -1.74
TM4SF4P48230 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TM4SF4P48230 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TM4SF4P48230 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
TM4SF4P48230 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.19□□□□□ -1.74
TM4SF4P48230 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TM4SF4P48230 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.19□□□□□ -1.74
TM4SF4P48230 RNU5E-8P-201ENST00000363502 116 ntBASIC4.19□□□□□ -1.74
TM4SF4P48230 Y_RNA.359-201ENST00000365498 102 ntBASIC4.19□□□□□ -1.74
TM4SF4P48230 TXNP7-201ENST00000406296 293 ntBASIC4.19□□□□□ -1.74
TM4SF4P48230 RPL21P24-201ENST00000413752 448 ntBASIC4.19□□□□□ -1.74
TM4SF4P48230 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.19□□□□□ -1.74
TM4SF4P48230 C1DP2-201ENST00000418167 426 ntBASIC4.19□□□□□ -1.74
TM4SF4P48230 COTL1P1-201ENST00000422309 375 ntBASIC4.19□□□□□ -1.74
TM4SF4P48230 PPP1R11P2-201ENST00000423543 382 ntBASIC4.19□□□□□ -1.74
TM4SF4P48230 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.19□□□□□ -1.74
TM4SF4P48230 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC4.19□□□□□ -1.74
TM4SF4P48230 AC244505.5-201ENST00000443639 207 ntBASIC4.19□□□□□ -1.74
TM4SF4P48230 MTND1P12-201ENST00000455231 147 ntBASIC4.19□□□□□ -1.74
TM4SF4P48230 AC005008.1-201ENST00000456151 612 ntBASIC4.19□□□□□ -1.74
TM4SF4P48230 RN7SL504P-201ENST00000494496 287 ntBASIC4.19□□□□□ -1.74
TM4SF4P48230 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TM4SF4P48230 AL359273.1-201ENST00000510918 627 ntBASIC4.19□□□□□ -1.74
TM4SF4P48230 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.19□□□□□ -1.74
TM4SF4P48230 RNU6-390P-201ENST00000516259 103 ntBASIC4.19□□□□□ -1.74
TM4SF4P48230 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.19□□□□□ -1.74
TM4SF4P48230 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.19□□□□□ -1.74
TM4SF4P48230 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.19□□□□□ -1.74
TM4SF4P48230 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.19□□□□□ -1.74
TM4SF4P48230 AL606834.2-201ENST00000602954 668 ntBASIC4.19□□□□□ -1.74
TM4SF4P48230 AC245517.5-201ENST00000611529 162 ntBASIC4.19□□□□□ -1.74
TM4SF4P48230 AC008498.1-201ENST00000613012 531 ntBASIC4.19□□□□□ -1.74
TM4SF4P48230 uc_338.12-201ENST00000616344 181 ntBASIC4.19□□□□□ -1.74
TM4SF4P48230 FRG1KP-201ENST00000623592 341 ntBASIC4.19□□□□□ -1.74
TM4SF4P48230 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.19□□□□□ -1.74
TM4SF4P48230 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.19□□□□□ -1.74
TM4SF4P48230 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.19□□□□□ -1.74
TM4SF4P48230 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TM4SF4P48230 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.18□□□□□ -1.74
TM4SF4P48230 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TM4SF4P48230 RNY4P16-201ENST00000364768 94 ntBASIC4.18□□□□□ -1.74
TM4SF4P48230 SNORA23-201ENST00000365128 182 ntBASIC4.18□□□□□ -1.74
TM4SF4P48230 RNY3P13-201ENST00000365542 102 ntBASIC4.18□□□□□ -1.74
TM4SF4P48230 DEFB109C-201ENST00000382575 264 ntBASIC4.18□□□□□ -1.74
TM4SF4P48230 DEFB109B-201ENST00000382656 264 ntBASIC4.18□□□□□ -1.74
TM4SF4P48230 RNU6-1119P-201ENST00000384349 108 ntBASIC4.18□□□□□ -1.74
TM4SF4P48230 HMGB3P23-201ENST00000414981 585 ntBASIC4.18□□□□□ -1.74
TM4SF4P48230 AC019097.1-201ENST00000424783 735 ntBASIC4.18□□□□□ -1.74
TM4SF4P48230 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC4.18□□□□□ -1.74
TM4SF4P48230 KCTD9P3-201ENST00000434597 1169 ntBASIC4.18□□□□□ -1.74
TM4SF4P48230 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TM4SF4P48230 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.18□□□□□ -1.74
TM4SF4P48230 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.18□□□□□ -1.74
TM4SF4P48230 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.18□□□□□ -1.74
TM4SF4P48230 MTCO2P29-201ENST00000465212 189 ntBASIC4.18□□□□□ -1.74
TM4SF4P48230 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.18□□□□□ -1.74
TM4SF4P48230 AC114967.1-201ENST00000504890 259 ntBASIC4.18□□□□□ -1.74
TM4SF4P48230 AC091435.1-201ENST00000505442 584 ntBASIC4.18□□□□□ -1.74
TM4SF4P48230 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.18□□□□□ -1.74
TM4SF4P48230 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.18□□□□□ -1.74
TM4SF4P48230 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.18□□□□□ -1.74
TM4SF4P48230 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.18□□□□□ -1.74
TM4SF4P48230 AP002963.1-201ENST00000530590 184 ntBASIC4.18□□□□□ -1.74
TM4SF4P48230 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TM4SF4P48230 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.18□□□□□ -1.74
TM4SF4P48230 AL391156.1-201ENST00000554965 554 ntBASIC4.18□□□□□ -1.74
TM4SF4P48230 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC4.18□□□□□ -1.74
TM4SF4P48230 MED28P6-201ENST00000558776 231 ntBASIC4.18□□□□□ -1.74
TM4SF4P48230 AC055876.1-202ENST00000567053 138 ntBASIC4.18□□□□□ -1.74
TM4SF4P48230 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms