Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 AC084024.2-201ENST00000503480 791 ntBASIC3.11□□□□□ -1.91
RFC4P35249 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.11□□□□□ -1.91
RFC4P35249 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RFC4P35249 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.11□□□□□ -1.91
RFC4P35249 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RFC4P35249 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.11□□□□□ -1.91
RFC4P35249 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.11□□□□□ -1.91
RFC4P35249 AP001317.1-201ENST00000531194 960 ntBASIC3.11□□□□□ -1.91
RFC4P35249 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.11□□□□□ -1.91
RFC4P35249 AC055876.1-202ENST00000567053 138 ntBASIC3.11□□□□□ -1.91
RFC4P35249 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.11□□□□□ -1.91
RFC4P35249 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.11□□□□□ -1.91
RFC4P35249 AC126365.2-201ENST00000580630 379 ntBASIC3.11□□□□□ -1.91
RFC4P35249 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RFC4P35249 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RFC4P35249 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RFC4P35249 SNORD114-1-201ENST00000362705 72 ntBASIC3.1□□□□□ -1.91
RFC4P35249 RNU6-839P-201ENST00000363347 108 ntBASIC3.1□□□□□ -1.91
RFC4P35249 MIR217-201ENST00000384817 110 ntBASIC3.1□□□□□ -1.91
RFC4P35249 MIR493-201ENST00000385254 89 ntBASIC3.1□□□□□ -1.91
RFC4P35249 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.1□□□□□ -1.91
RFC4P35249 RPS15AP38-201ENST00000413110 372 ntBASIC3.1□□□□□ -1.91
RFC4P35249 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.1□□□□□ -1.91
RFC4P35249 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.1□□□□□ -1.91
RFC4P35249 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.1□□□□□ -1.91
RFC4P35249 AC096638.1-201ENST00000444678 216 ntBASIC3.1□□□□□ -1.91
RFC4P35249 AC104058.1-201ENST00000448028 297 ntBASIC3.1□□□□□ -1.91
RFC4P35249 CACYBPP2-201ENST00000453625 678 ntBASIC3.1□□□□□ -1.91
RFC4P35249 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.1□□□□□ -1.91
RFC4P35249 RPL30P9-201ENST00000465586 330 ntBASIC3.1□□□□□ -1.91
RFC4P35249 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RFC4P35249 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.1□□□□□ -1.91
RFC4P35249 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC3.1□□□□□ -1.91
RFC4P35249 AC087897.1-201ENST00000550134 156 ntBASIC3.1□□□□□ -1.91
RFC4P35249 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.1□□□□□ -1.91
RFC4P35249 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.1□□□□□ -1.91
RFC4P35249 AC010620.2-201ENST00000600135 313 ntBASIC3.1□□□□□ -1.91
RFC4P35249 AL445435.1-201ENST00000604232 665 ntBASIC3.1□□□□□ -1.91
RFC4P35249 BNIP3P31-201ENST00000604515 566 ntBASIC3.1□□□□□ -1.91
RFC4P35249 AP002802.2-201ENST00000605877 235 ntBASIC3.1□□□□□ -1.91
RFC4P35249 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.1□□□□□ -1.91
RFC4P35249 AC009318.4-201ENST00000620496 486 ntBASIC3.1□□□□□ -1.91
RFC4P35249 AP003476.1-201ENST00000623984 516 ntBASIC3.1□□□□□ -1.91
RFC4P35249 PISRT1-201ENST00000626175 531 ntBASIC3.1□□□□□ -1.91
RFC4P35249 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.1□□□□□ -1.91
RFC4P35249 AC106858.1-201ENST00000637497 429 ntBASIC3.1□□□□□ -1.91
RFC4P35249 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.1□□□□□ -1.91
RFC4P35249 AC008264.2-201ENST00000610193 3731 ntBASIC3.1□□□□□ -1.91
RFC4P35249 RNU1-100P-201ENST00000365255 165 ntBASIC3.09□□□□□ -1.91
RFC4P35249 RNA5SP252-201ENST00000391131 119 ntBASIC3.09□□□□□ -1.91
RFC4P35249 BTF3P7-201ENST00000407097 488 ntBASIC3.09□□□□□ -1.91
RFC4P35249 AL133384.1-201ENST00000412744 351 ntBASIC3.09□□□□□ -1.91
RFC4P35249 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.09□□□□□ -1.91
RFC4P35249 C1DP1-201ENST00000426049 402 ntBASIC3.09□□□□□ -1.91
RFC4P35249 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.09□□□□□ -1.91
RFC4P35249 TRBV26OR9-2-201ENST00000432077 293 ntBASIC3.09□□□□□ -1.91
RFC4P35249 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
RFC4P35249 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.09□□□□□ -1.91
RFC4P35249 RPL23AP16-201ENST00000441715 421 ntBASIC3.09□□□□□ -1.91
RFC4P35249 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.09□□□□□ -1.91
RFC4P35249 AL589880.1-201ENST00000448271 287 ntBASIC3.09□□□□□ -1.91
RFC4P35249 AC008427.1-201ENST00000503102 655 ntBASIC3.09□□□□□ -1.91
RFC4P35249 AC026414.1-201ENST00000504046 698 ntBASIC3.09□□□□□ -1.91
RFC4P35249 AC009901.1-201ENST00000506703 541 ntBASIC3.09□□□□□ -1.91
RFC4P35249 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.09□□□□□ -1.91
RFC4P35249 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC3.09□□□□□ -1.91
RFC4P35249 CKS1BP7-201ENST00000522230 235 ntBASIC3.09□□□□□ -1.91
RFC4P35249 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.09□□□□□ -1.91
RFC4P35249 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.09□□□□□ -1.91
RFC4P35249 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.09□□□□□ -1.91
RFC4P35249 MIR4666A-201ENST00000580160 79 ntBASIC3.09□□□□□ -1.91
RFC4P35249 GLUD1P4-201ENST00000590914 418 ntBASIC3.09□□□□□ -1.91
RFC4P35249 AP003973.1-201ENST00000604639 691 ntBASIC3.09□□□□□ -1.91
RFC4P35249 AC009159.1-201ENST00000618386 642 ntBASIC3.09□□□□□ -1.91
RFC4P35249 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC3.09□□□□□ -1.91
RFC4P35249 AC026634.1-201ENST00000634369 198 ntBASIC3.09□□□□□ -1.91
RFC4P35249 AC099063.3-201ENST00000642066 185 ntBASIC3.09□□□□□ -1.91
RFC4P35249 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
RFC4P35249 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RFC4P35249 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.09□□□□□ -1.91
RFC4P35249 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
RFC4P35249 AC099654.7-201ENST00000635788 2127 ntBASIC3.08□□□□□ -1.92
RFC4P35249 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
RFC4P35249 RNA5SP456-201ENST00000364002 114 ntBASIC3.08□□□□□ -1.92
RFC4P35249 RNA5SP210-201ENST00000391034 120 ntBASIC3.08□□□□□ -1.92
RFC4P35249 AC107081.1-201ENST00000414975 361 ntBASIC3.08□□□□□ -1.92
RFC4P35249 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.08□□□□□ -1.92
RFC4P35249 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.08□□□□□ -1.92
RFC4P35249 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC3.08□□□□□ -1.92
RFC4P35249 AC244505.4-201ENST00000434905 287 ntBASIC3.08□□□□□ -1.92
RFC4P35249 MTND4LP10-201ENST00000435146 291 ntBASIC3.08□□□□□ -1.92
RFC4P35249 AL603825.1-201ENST00000438481 80 ntBASIC3.08□□□□□ -1.92
RFC4P35249 SSXP5-201ENST00000443473 287 ntBASIC3.08□□□□□ -1.92
RFC4P35249 Z96811.1-201ENST00000445880 108 ntBASIC3.08□□□□□ -1.92
RFC4P35249 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.08□□□□□ -1.92
RFC4P35249 AC093767.1-201ENST00000504523 156 ntBASIC3.08□□□□□ -1.92
RFC4P35249 CBX3P3-201ENST00000508108 532 ntBASIC3.08□□□□□ -1.92
RFC4P35249 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.08□□□□□ -1.92
RFC4P35249 RNU6-991P-201ENST00000516168 107 ntBASIC3.08□□□□□ -1.92
RFC4P35249 MTCO3P15-201ENST00000526563 574 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms