Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CD40P25942 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.16□□□□□ -1.74
CD40P25942 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.16□□□□□ -1.74
CD40P25942 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
CD40P25942 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CD40P25942 MAPK10-338ENST00000641647 3362 ntBASIC4.16□□□□□ -1.74
CD40P25942 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.15□□□□□ -1.74
CD40P25942 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.74
CD40P25942 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
CD40P25942 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
CD40P25942 TLK1P1-201ENST00000456760 2440 ntBASIC4.15□□□□□ -1.74
CD40P25942 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
CD40P25942 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CD40P25942 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.74
CD40P25942 AC009643.2-201ENST00000603543 1448 ntBASIC4.15□□□□□ -1.74
CD40P25942 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.15□□□□□ -1.74
CD40P25942 LINC01109-201ENST00000603837 3081 ntBASIC4.15□□□□□ -1.75
CD40P25942 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CD40P25942 UBE2L2-201ENST00000254302 429 ntBASIC4.15□□□□□ -1.75
CD40P25942 RNU6-254P-201ENST00000363377 107 ntBASIC4.15□□□□□ -1.75
CD40P25942 Y_RNA.387-201ENST00000383918 102 ntBASIC4.15□□□□□ -1.75
CD40P25942 Y_RNA.394-201ENST00000383942 103 ntBASIC4.15□□□□□ -1.75
CD40P25942 Y_RNA.399-201ENST00000383955 105 ntBASIC4.15□□□□□ -1.75
CD40P25942 MIR548F5-201ENST00000408421 86 ntBASIC4.15□□□□□ -1.75
CD40P25942 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC4.15□□□□□ -1.75
CD40P25942 RPL35AP21-201ENST00000437667 333 ntBASIC4.15□□□□□ -1.75
CD40P25942 AC011753.3-201ENST00000443436 406 ntBASIC4.15□□□□□ -1.75
CD40P25942 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.15□□□□□ -1.75
CD40P25942 AC010326.1-201ENST00000462726 602 ntBASIC4.15□□□□□ -1.75
CD40P25942 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CD40P25942 AC002456.2-201ENST00000509356 380 ntBASIC4.15□□□□□ -1.75
CD40P25942 AL359273.1-201ENST00000510918 627 ntBASIC4.15□□□□□ -1.75
CD40P25942 RNA5SP471-201ENST00000516971 106 ntBASIC4.15□□□□□ -1.75
CD40P25942 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.15□□□□□ -1.75
CD40P25942 RPL23AP53-201ENST00000521854 457 ntBASIC4.15□□□□□ -1.75
CD40P25942 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.15□□□□□ -1.75
CD40P25942 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.15□□□□□ -1.75
CD40P25942 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.15□□□□□ -1.75
CD40P25942 DYNLL1P4-201ENST00000549314 266 ntBASIC4.15□□□□□ -1.75
CD40P25942 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.15□□□□□ -1.75
CD40P25942 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.15□□□□□ -1.75
CD40P25942 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC4.15□□□□□ -1.75
CD40P25942 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.15□□□□□ -1.75
CD40P25942 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
CD40P25942 MIR5699-201ENST00000578903 90 ntBASIC4.15□□□□□ -1.75
CD40P25942 POLR3GP2-201ENST00000588366 668 ntBASIC4.15□□□□□ -1.75
CD40P25942 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.15□□□□□ -1.75
CD40P25942 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CD40P25942 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
CD40P25942 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
CD40P25942 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
CD40P25942 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.15□□□□□ -1.75
CD40P25942 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CD40P25942 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.75
CD40P25942 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CD40P25942 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.14□□□□□ -1.75
CD40P25942 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.14□□□□□ -1.75
CD40P25942 AL590240.1-201ENST00000334118 313 ntBASIC4.14□□□□□ -1.75
CD40P25942 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.14□□□□□ -1.75
CD40P25942 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CD40P25942 AL592045.1-201ENST00000429867 352 ntBASIC4.14□□□□□ -1.75
CD40P25942 AC236972.2-201ENST00000434979 310 ntBASIC4.14□□□□□ -1.75
CD40P25942 RPL23AP89-201ENST00000439324 255 ntBASIC4.14□□□□□ -1.75
CD40P25942 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.14□□□□□ -1.75
CD40P25942 AL356981.1-201ENST00000454879 684 ntBASIC4.14□□□□□ -1.75
CD40P25942 RPL37P6-201ENST00000460682 294 ntBASIC4.14□□□□□ -1.75
CD40P25942 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.14□□□□□ -1.75
CD40P25942 AC006463.2-201ENST00000473326 348 ntBASIC4.14□□□□□ -1.75
CD40P25942 AC009901.1-201ENST00000506703 541 ntBASIC4.14□□□□□ -1.75
CD40P25942 AC091868.1-201ENST00000508746 304 ntBASIC4.14□□□□□ -1.75
CD40P25942 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
CD40P25942 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC4.14□□□□□ -1.75
CD40P25942 RNU6-1256P-201ENST00000516539 103 ntBASIC4.14□□□□□ -1.75
CD40P25942 RNU6-566P-201ENST00000516790 107 ntBASIC4.14□□□□□ -1.75
CD40P25942 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.14□□□□□ -1.75
CD40P25942 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.14□□□□□ -1.75
CD40P25942 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.14□□□□□ -1.75
CD40P25942 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CD40P25942 MIR3921-201ENST00000577308 85 ntBASIC4.14□□□□□ -1.75
CD40P25942 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC4.14□□□□□ -1.75
CD40P25942 MIR3672-201ENST00000584290 82 ntBASIC4.14□□□□□ -1.75
CD40P25942 AL133255.1-201ENST00000606374 441 ntBASIC4.14□□□□□ -1.75
CD40P25942 AP002826.1-201ENST00000608835 315 ntBASIC4.14□□□□□ -1.75
CD40P25942 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.14□□□□□ -1.75
CD40P25942 AP000346.3-201ENST00000622821 210 ntBASIC4.14□□□□□ -1.75
CD40P25942 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.14□□□□□ -1.75
CD40P25942 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.14□□□□□ -1.75
CD40P25942 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CD40P25942 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CD40P25942 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.14□□□□□ -1.75
CD40P25942 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.14□□□□□ -1.75
CD40P25942 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.14□□□□□ -1.75
CD40P25942 MTND4P23-201ENST00000447723 1363 ntBASIC4.14□□□□□ -1.75
CD40P25942 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
CD40P25942 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.13□□□□□ -1.75
CD40P25942 PCAT14-202ENST00000627127 3935 ntBASIC4.13□□□□□ -1.75
CD40P25942 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CD40P25942 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CD40P25942 ZNF285B-201ENST00000561698 1767 ntBASIC4.13□□□□□ -1.75
CD40P25942 RNU6-512P-201ENST00000364438 103 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms