| PTPN2 | P17706 | Y_RNA.46-201 | ENST00000362695 | 102 nt | BASIC | 3.78 | □□□□□ -1.8 | | |
| PTPN2 | P17706 | OR5V1-215 | ENST00000377154 | 1266 nt | APPRIS P1 BASIC | 3.78 | □□□□□ -1.8 | | |
| PTPN2 | P17706 | SNORA75-201 | ENST00000384158 | 137 nt | BASIC | 3.78 | □□□□□ -1.8 | | |
| PTPN2 | P17706 | EI24P2-201 | ENST00000397776 | 1076 nt | BASIC | 3.78 | □□□□□ -1.8 | | |
| PTPN2 | P17706 | AP000567.1-201 | ENST00000406413 | 156 nt | BASIC | 3.78 | □□□□□ -1.8 | | |
| PTPN2 | P17706 | CCNG1P1-201 | ENST00000406783 | 885 nt | BASIC | 3.78 | □□□□□ -1.8 | | |
| PTPN2 | P17706 | PSMA4-202 | ENST00000413382 | 1019 nt | TSL 1 (best) BASIC | 3.78 | □□□□□ -1.8 | | |
| PTPN2 | P17706 | NAP1L1P2-201 | ENST00000414182 | 1089 nt | BASIC | 3.78 | □□□□□ -1.8 | | |
| PTPN2 | P17706 | CDK8P2-201 | ENST00000415020 | 547 nt | BASIC | 3.78 | □□□□□ -1.8 | | |
| PTPN2 | P17706 | RPL21P32-201 | ENST00000419877 | 477 nt | BASIC | 3.78 | □□□□□ -1.8 | | |
| PTPN2 | P17706 | LINC01794-201 | ENST00000420187 | 549 nt | TSL 4 BASIC | 3.78 | □□□□□ -1.8 | | |
| PTPN2 | P17706 | AC099342.1-201 | ENST00000446399 | 1124 nt | TSL 3 BASIC | 3.78 | □□□□□ -1.8 | | |
| PTPN2 | P17706 | AL592447.1-201 | ENST00000447592 | 540 nt | BASIC | 3.78 | □□□□□ -1.8 | | |
| PTPN2 | P17706 | AC104308.1-201 | ENST00000454621 | 333 nt | BASIC | 3.78 | □□□□□ -1.8 | | |
| PTPN2 | P17706 | HMGN2P16-201 | ENST00000456802 | 261 nt | BASIC | 3.78 | □□□□□ -1.8 | | |
| PTPN2 | P17706 | AL034349.1-201 | ENST00000458367 | 549 nt | TSL 5 BASIC | 3.78 | □□□□□ -1.8 | | |
| PTPN2 | P17706 | RN7SL601P-201 | ENST00000471221 | 293 nt | BASIC | 3.78 | □□□□□ -1.8 | | |
| PTPN2 | P17706 | APOA2-210 | ENST00000491350 | 263 nt | TSL 1 (best) BASIC | 3.78 | □□□□□ -1.8 | | |
| PTPN2 | P17706 | HMGB1P22-201 | ENST00000505315 | 124 nt | BASIC | 3.78 | □□□□□ -1.8 | | |
| PTPN2 | P17706 | ARL2BPP4-201 | ENST00000506854 | 471 nt | BASIC | 3.78 | □□□□□ -1.8 | | |
| PTPN2 | P17706 | AC093297.2-205 | ENST00000508123 | 572 nt | TSL 3 BASIC | 3.78 | □□□□□ -1.8 | | |
| PTPN2 | P17706 | RNA5SP468-201 | ENST00000516782 | 93 nt | BASIC | 3.78 | □□□□□ -1.8 | | |
| PTPN2 | P17706 | RNU6-1003P-201 | ENST00000517099 | 105 nt | BASIC | 3.78 | □□□□□ -1.8 | | |
| PTPN2 | P17706 | AC102945.1-201 | ENST00000522640 | 407 nt | TSL 2 BASIC | 3.78 | □□□□□ -1.8 | | |
| PTPN2 | P17706 | ALKBH3-AS1-202 | ENST00000527960 | 547 nt | TSL 4 BASIC | 3.78 | □□□□□ -1.8 | | |
| PTPN2 | P17706 | AP003497.1-201 | ENST00000528472 | 562 nt | BASIC | 3.78 | □□□□□ -1.8 | | |
| PTPN2 | P17706 | SYF2P1-201 | ENST00000550658 | 413 nt | BASIC | 3.78 | □□□□□ -1.8 | | |
| PTPN2 | P17706 | AC011611.1-201 | ENST00000552179 | 197 nt | BASIC | 3.78 | □□□□□ -1.8 | | |
| PTPN2 | P17706 | LINC02562-201 | ENST00000561705 | 785 nt | TSL 2 BASIC | 3.78 | □□□□□ -1.8 | | |
| PTPN2 | P17706 | AC120045.1-201 | ENST00000563502 | 251 nt | TSL 3 BASIC | 3.78 | □□□□□ -1.8 | | |
| PTPN2 | P17706 | AC139426.2-201 | ENST00000568289 | 251 nt | TSL 3 BASIC | 3.78 | □□□□□ -1.8 | | |
| PTPN2 | P17706 | AC037487.2-201 | ENST00000581796 | 537 nt | TSL 3 BASIC | 3.78 | □□□□□ -1.8 | | |
| PTPN2 | P17706 | AC060771.1-201 | ENST00000582031 | 164 nt | BASIC | 3.78 | □□□□□ -1.8 | | |
| PTPN2 | P17706 | AC005771.1-201 | ENST00000585581 | 349 nt | BASIC | 3.78 | □□□□□ -1.8 | | |
| PTPN2 | P17706 | XIAPP1-201 | ENST00000603162 | 600 nt | BASIC | 3.78 | □□□□□ -1.8 | | |
| PTPN2 | P17706 | AC006254.3-201 | ENST00000603353 | 884 nt | BASIC | 3.78 | □□□□□ -1.8 | | |
| PTPN2 | P17706 | AC015871.2-201 | ENST00000603605 | 948 nt | BASIC | 3.78 | □□□□□ -1.8 | | |
| PTPN2 | P17706 | ANKRD36C-207 | ENST00000612359 | 650 nt | TSL 1 (best) BASIC | 3.78 | □□□□□ -1.8 | | |
| PTPN2 | P17706 | AL592295.2-201 | ENST00000612578 | 206 nt | BASIC | 3.78 | □□□□□ -1.8 | | |
| PTPN2 | P17706 | TMBIM4-213 | ENST00000613669 | 851 nt | TSL 5 BASIC | 3.78 | □□□□□ -1.8 | | |
| PTPN2 | P17706 | AC008250.2-201 | ENST00000615261 | 205 nt | BASIC | 3.78 | □□□□□ -1.8 | | |
| PTPN2 | P17706 | AL603839.4-201 | ENST00000624658 | 1005 nt | BASIC | 3.78 | □□□□□ -1.8 | | |
| PTPN2 | P17706 | CAPZA2-214 | ENST00000628758 | 525 nt | TSL 5 BASIC | 3.78 | □□□□□ -1.8 | | |
| PTPN2 | P17706 | PCBP1-AS1-348 | ENST00000629506 | 667 nt | TSL 5 BASIC | 3.78 | □□□□□ -1.8 | | |
| PTPN2 | P17706 | FAM71D-211 | ENST00000612183 | 1790 nt | APPRIS P1 TSL 2 BASIC | 3.78 | □□□□□ -1.8 | | |
| PTPN2 | P17706 | D21S2088E-201 | ENST00000262354 | 1725 nt | TSL 1 (best) BASIC | 3.78 | □□□□□ -1.8 | | |
| PTPN2 | P17706 | LINC01828-203 | ENST00000452716 | 3250 nt | TSL 5 BASIC | 3.78 | □□□□□ -1.8 | | |
| PTPN2 | P17706 | ZNF92-204 | ENST00000450302 | 2957 nt | TSL 1 (best) BASIC | 3.78 | □□□□□ -1.81 | | |
| PTPN2 | P17706 | MACC1-205 | ENST00000589011 | 2686 nt | APPRIS P1 TSL 5 BASIC | 3.77 | □□□□□ -1.81 | | |
| PTPN2 | P17706 | HEATR5B-201 | ENST00000233099 | 6905 nt | APPRIS P1 TSL 1 (best) BASIC | 3.77 | □□□□□ -1.81 | | |
| PTPN2 | P17706 | C2orf78-201 | ENST00000409561 | 3045 nt | APPRIS P1 TSL 2 BASIC | 3.77 | □□□□□ -1.81 | | |
| PTPN2 | P17706 | RNU6-359P-201 | ENST00000365466 | 108 nt | BASIC | 3.77 | □□□□□ -1.81 | | |
| PTPN2 | P17706 | IVNS1ABP-201 | ENST00000367497 | 746 nt | TSL 5 BASIC | 3.77 | □□□□□ -1.81 | | |
| PTPN2 | P17706 | RNU6-114P-201 | ENST00000384704 | 105 nt | BASIC | 3.77 | □□□□□ -1.81 | | |
| PTPN2 | P17706 | U3.20-201 | ENST00000390909 | 217 nt | BASIC | 3.77 | □□□□□ -1.81 | | |
| PTPN2 | P17706 | MTHFD2P2-201 | ENST00000407725 | 247 nt | BASIC | 3.77 | □□□□□ -1.81 | | |
| PTPN2 | P17706 | USP9YP13-201 | ENST00000417797 | 480 nt | BASIC | 3.77 | □□□□□ -1.81 | | |
| PTPN2 | P17706 | HMGB3P20-201 | ENST00000417997 | 600 nt | BASIC | 3.77 | □□□□□ -1.81 | | |
| PTPN2 | P17706 | AL691515.1-201 | ENST00000432976 | 733 nt | TSL 2 BASIC | 3.77 | □□□□□ -1.81 | | |
| PTPN2 | P17706 | AL583835.2-201 | ENST00000435483 | 500 nt | TSL 2 BASIC | 3.77 | □□□□□ -1.81 | | |
| PTPN2 | P17706 | Z83839.2-201 | ENST00000436294 | 274 nt | TSL 5 BASIC | 3.77 | □□□□□ -1.81 | | |
| PTPN2 | P17706 | UBE2V1P13-201 | ENST00000436983 | 439 nt | BASIC | 3.77 | □□□□□ -1.81 | | |
| PTPN2 | P17706 | AL022238.1-201 | ENST00000442557 | 355 nt | BASIC | 3.77 | □□□□□ -1.81 | | |
| PTPN2 | P17706 | MTND1P27-201 | ENST00000451117 | 902 nt | BASIC | 3.77 | □□□□□ -1.81 | | |
| PTPN2 | P17706 | AC099563.1-201 | ENST00000456086 | 418 nt | BASIC | 3.77 | □□□□□ -1.81 | | |
| PTPN2 | P17706 | AP1S2P1-201 | ENST00000457344 | 379 nt | BASIC | 3.77 | □□□□□ -1.81 | | |
| PTPN2 | P17706 | SNORA70.18-201 | ENST00000516696 | 98 nt | BASIC | 3.77 | □□□□□ -1.81 | | |
| PTPN2 | P17706 | AC090539.1-201 | ENST00000523907 | 434 nt | TSL 3 BASIC | 3.77 | □□□□□ -1.81 | | |
| PTPN2 | P17706 | AP002963.1-201 | ENST00000530590 | 184 nt | BASIC | 3.77 | □□□□□ -1.81 | | |
| PTPN2 | P17706 | AC022878.1-201 | ENST00000530684 | 149 nt | BASIC | 3.77 | □□□□□ -1.81 | | |
| PTPN2 | P17706 | AP000442.2-202 | ENST00000531311 | 601 nt | TSL 3 BASIC | 3.77 | □□□□□ -1.81 | | |
| PTPN2 | P17706 | LINC02286-201 | ENST00000552425 | 285 nt | TSL 2 BASIC | 3.77 | □□□□□ -1.81 | | |
| PTPN2 | P17706 | TIMM9-208 | ENST00000556007 | 746 nt | TSL 3 BASIC | 3.77 | □□□□□ -1.81 | | |
| PTPN2 | P17706 | AC021739.4-201 | ENST00000561417 | 569 nt | TSL 4 BASIC | 3.77 | □□□□□ -1.81 | | |
| PTPN2 | P17706 | AGGF1P4-201 | ENST00000568249 | 801 nt | BASIC | 3.77 | □□□□□ -1.81 | | |
| PTPN2 | P17706 | ZNF415P1-201 | ENST00000582279 | 1166 nt | BASIC | 3.77 | □□□□□ -1.81 | | |
| PTPN2 | P17706 | UBE2L4-201 | ENST00000587688 | 464 nt | BASIC | 3.77 | □□□□□ -1.81 | | |
| PTPN2 | P17706 | AL365503.1-201 | ENST00000605247 | 905 nt | BASIC | 3.77 | □□□□□ -1.81 | | |
| PTPN2 | P17706 | OR10AB1P-201 | ENST00000609613 | 938 nt | BASIC | 3.77 | □□□□□ -1.81 | | |
| PTPN2 | P17706 | AC100793.4-201 | ENST00000613683 | 429 nt | BASIC | 3.77 | □□□□□ -1.81 | | |
| PTPN2 | P17706 | AC002550.2-201 | ENST00000621246 | 394 nt | BASIC | 3.77 | □□□□□ -1.81 | | |
| PTPN2 | P17706 | AL356585.4-201 | ENST00000623078 | 1229 nt | BASIC | 3.77 | □□□□□ -1.81 | | |
| PTPN2 | P17706 | AL158801.5-201 | ENST00000623123 | 465 nt | BASIC | 3.77 | □□□□□ -1.81 | | |
| PTPN2 | P17706 | AC079597.1-201 | ENST00000624306 | 508 nt | BASIC | 3.77 | □□□□□ -1.81 | | |
| PTPN2 | P17706 | ADGRG4-203 | ENST00000394143 | 9931 nt | APPRIS P2 TSL 1 (best) BASIC | 3.77 | □□□□□ -1.81 | | |
| PTPN2 | P17706 | FOXP2-224 | ENST00000635534 | 4290 nt | TSL 5 BASIC | 3.77 | □□□□□ -1.81 | | |
| PTPN2 | P17706 | LTN1-207 | ENST00000614971 | 7756 nt | TSL 1 (best) BASIC | 3.77 | □□□□□ -1.81 | | |
| PTPN2 | P17706 | RBM39-201 | ENST00000253363 | 2488 nt | APPRIS P4 TSL 1 (best) BASIC | 3.77 | □□□□□ -1.81 | | |
| PTPN2 | P17706 | TMCO5A-203 | ENST00000558158 | 2894 nt | APPRIS ALT2 TSL 3 BASIC | 3.77 | □□□□□ -1.81 | | |
| PTPN2 | P17706 | HSP90AA4P-202 | ENST00000506915 | 2228 nt | BASIC | 3.76 | □□□□□ -1.81 | | |
| PTPN2 | P17706 | OR5B3-201 | ENST00000309403 | 945 nt | APPRIS P1 BASIC | 3.76 | □□□□□ -1.81 | | |
| PTPN2 | P17706 | OR10A7-201 | ENST00000326258 | 951 nt | APPRIS P1 BASIC | 3.76 | □□□□□ -1.81 | | |
| PTPN2 | P17706 | RNY4P24-201 | ENST00000362735 | 96 nt | BASIC | 3.76 | □□□□□ -1.81 | | |
| PTPN2 | P17706 | DEFB109C-201 | ENST00000382575 | 264 nt | BASIC | 3.76 | □□□□□ -1.81 | | |
| PTPN2 | P17706 | DEFB109B-201 | ENST00000382656 | 264 nt | BASIC | 3.76 | □□□□□ -1.81 | | |
| PTPN2 | P17706 | Y_RNA.608-201 | ENST00000410647 | 95 nt | BASIC | 3.76 | □□□□□ -1.81 | | |
| PTPN2 | P17706 | AC105271.1-202 | ENST00000411417 | 445 nt | TSL 3 BASIC | 3.76 | □□□□□ -1.81 | | |
| PTPN2 | P17706 | AL663109.1-201 | ENST00000411498 | 844 nt | BASIC | 3.76 | □□□□□ -1.81 | | |
| PTPN2 | P17706 | AC078974.1-201 | ENST00000411597 | 223 nt | BASIC | 3.76 | □□□□□ -1.81 | | |
| PTPN2 | P17706 | MTCO3P41-201 | ENST00000414801 | 328 nt | BASIC | 3.76 | □□□□□ -1.81 | | |