Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.55□□□□□ -1.68
COL6A2P12110 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.55□□□□□ -1.68
COL6A2P12110 AL121576.1-201ENST00000556055 276 ntBASIC4.55□□□□□ -1.68
COL6A2P12110 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.55□□□□□ -1.68
COL6A2P12110 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
COL6A2P12110 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.55□□□□□ -1.68
COL6A2P12110 CTHRC1P1-201ENST00000605383 469 ntBASIC4.55□□□□□ -1.68
COL6A2P12110 AC024940.4-201ENST00000605507 246 ntBASIC4.55□□□□□ -1.68
COL6A2P12110 AL133215.3-201ENST00000609801 448 ntBASIC4.55□□□□□ -1.68
COL6A2P12110 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC4.55□□□□□ -1.68
COL6A2P12110 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.55□□□□□ -1.68
COL6A2P12110 AC243312.2-201ENST00000623340 601 ntBASIC4.55□□□□□ -1.68
COL6A2P12110 AC134503.1-201ENST00000633048 54 ntBASIC4.55□□□□□ -1.68
COL6A2P12110 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
COL6A2P12110 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
COL6A2P12110 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.55□□□□□ -1.68
COL6A2P12110 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
COL6A2P12110 AL136964.1-201ENST00000622038 2990 ntBASIC4.55□□□□□ -1.68
COL6A2P12110 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.55□□□□□ -1.68
COL6A2P12110 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
COL6A2P12110 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
COL6A2P12110 LARP1BP1-201ENST00000506036 1359 ntBASIC4.54□□□□□ -1.68
COL6A2P12110 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.54□□□□□ -1.68
COL6A2P12110 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
COL6A2P12110 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
COL6A2P12110 AL391684.1-202ENST00000641293 1636 ntBASIC4.54□□□□□ -1.68
COL6A2P12110 RNU1-108P-201ENST00000362556 161 ntBASIC4.54□□□□□ -1.68
COL6A2P12110 RNU6-1155P-201ENST00000363554 107 ntBASIC4.54□□□□□ -1.68
COL6A2P12110 MIR135A2-201ENST00000384854 100 ntBASIC4.54□□□□□ -1.68
COL6A2P12110 SDHCP2-201ENST00000398565 501 ntBASIC4.54□□□□□ -1.68
COL6A2P12110 RPL37P18-201ENST00000411602 243 ntBASIC4.54□□□□□ -1.68
COL6A2P12110 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.54□□□□□ -1.68
COL6A2P12110 BX323014.1-201ENST00000412876 237 ntBASIC4.54□□□□□ -1.68
COL6A2P12110 AL137014.1-201ENST00000420490 1226 ntBASIC4.54□□□□□ -1.68
COL6A2P12110 AL360081.1-201ENST00000428299 555 ntBASIC4.54□□□□□ -1.68
COL6A2P12110 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.54□□□□□ -1.68
COL6A2P12110 OR1H1P-201ENST00000448731 937 ntBASIC4.54□□□□□ -1.68
COL6A2P12110 snoU13.20-201ENST00000459180 104 ntBASIC4.54□□□□□ -1.68
COL6A2P12110 RPL35AP28-201ENST00000459730 331 ntBASIC4.54□□□□□ -1.68
COL6A2P12110 AC008481.1-201ENST00000463278 396 ntBASIC4.54□□□□□ -1.68
COL6A2P12110 RPS26P28-201ENST00000470806 348 ntBASIC4.54□□□□□ -1.68
COL6A2P12110 RN7SL860P-201ENST00000473738 223 ntBASIC4.54□□□□□ -1.68
COL6A2P12110 AC068587.1-201ENST00000483613 781 ntBASIC4.54□□□□□ -1.68
COL6A2P12110 RPL36AP41-201ENST00000493820 306 ntBASIC4.54□□□□□ -1.68
COL6A2P12110 BTF3P13-201ENST00000513224 490 ntBASIC4.54□□□□□ -1.68
COL6A2P12110 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.54□□□□□ -1.68
COL6A2P12110 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.54□□□□□ -1.68
COL6A2P12110 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.54□□□□□ -1.68
COL6A2P12110 AC020661.2-201ENST00000560114 134 ntBASIC4.54□□□□□ -1.68
COL6A2P12110 AC105129.1-201ENST00000560250 297 ntBASIC4.54□□□□□ -1.68
COL6A2P12110 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.54□□□□□ -1.68
COL6A2P12110 AC093249.1-201ENST00000567049 203 ntBASIC4.54□□□□□ -1.68
COL6A2P12110 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.54□□□□□ -1.68
COL6A2P12110 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.54□□□□□ -1.68
COL6A2P12110 BNIP3P22-201ENST00000593399 556 ntBASIC4.54□□□□□ -1.68
COL6A2P12110 AL034351.1-201ENST00000605288 668 ntBASIC4.54□□□□□ -1.68
COL6A2P12110 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
COL6A2P12110 AC068870.2-201ENST00000620635 389 ntBASIC4.54□□□□□ -1.68
COL6A2P12110 AC110801.1-201ENST00000623590 212 ntBASIC4.54□□□□□ -1.68
COL6A2P12110 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.54□□□□□ -1.68
COL6A2P12110 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
COL6A2P12110 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
COL6A2P12110 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
COL6A2P12110 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.53□□□□□ -1.68
COL6A2P12110 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.53□□□□□ -1.68
COL6A2P12110 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.53□□□□□ -1.68
COL6A2P12110 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
COL6A2P12110 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.53□□□□□ -1.68
COL6A2P12110 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.53□□□□□ -1.68
COL6A2P12110 XIAPP3-201ENST00000312918 795 ntBASIC4.53□□□□□ -1.68
COL6A2P12110 RNA5SP502-201ENST00000362694 119 ntBASIC4.53□□□□□ -1.68
COL6A2P12110 RNA5SP123-201ENST00000363244 119 ntBASIC4.53□□□□□ -1.68
COL6A2P12110 Y_RNA.212-201ENST00000364177 102 ntBASIC4.53□□□□□ -1.68
COL6A2P12110 Y_RNA.259-201ENST00000364619 101 ntBASIC4.53□□□□□ -1.68
COL6A2P12110 LAP3P1-201ENST00000403648 294 ntBASIC4.53□□□□□ -1.68
COL6A2P12110 VN1R36P-201ENST00000414936 291 ntBASIC4.53□□□□□ -1.68
COL6A2P12110 MTCO2P27-201ENST00000420740 428 ntBASIC4.53□□□□□ -1.68
COL6A2P12110 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.53□□□□□ -1.68
COL6A2P12110 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.53□□□□□ -1.68
COL6A2P12110 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.53□□□□□ -1.68
COL6A2P12110 RPL21P112-201ENST00000434403 463 ntBASIC4.53□□□□□ -1.68
COL6A2P12110 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
COL6A2P12110 AC069285.2-201ENST00000440210 275 ntBASIC4.53□□□□□ -1.68
COL6A2P12110 AC020550.1-201ENST00000447385 163 ntBASIC4.53□□□□□ -1.68
COL6A2P12110 AC010631.1-201ENST00000474150 156 ntBASIC4.53□□□□□ -1.68
COL6A2P12110 RPL21P103-201ENST00000479921 488 ntBASIC4.53□□□□□ -1.68
COL6A2P12110 AC083904.1-201ENST00000487828 231 ntBASIC4.53□□□□□ -1.68
COL6A2P12110 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.53□□□□□ -1.68
COL6A2P12110 RNU6-1038P-201ENST00000516516 104 ntBASIC4.53□□□□□ -1.68
COL6A2P12110 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC4.53□□□□□ -1.68
COL6A2P12110 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
COL6A2P12110 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.53□□□□□ -1.68
COL6A2P12110 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.53□□□□□ -1.68
COL6A2P12110 OR11H5P-201ENST00000554039 926 ntBASIC4.53□□□□□ -1.68
COL6A2P12110 EDDM3DP-201ENST00000554692 434 ntBASIC4.53□□□□□ -1.68
COL6A2P12110 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.53□□□□□ -1.68
COL6A2P12110 AC008521.1-201ENST00000587471 187 ntBASIC4.53□□□□□ -1.68
COL6A2P12110 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.53□□□□□ -1.68
COL6A2P12110 AC012669.1-201ENST00000603209 283 ntBASIC4.53□□□□□ -1.68
COL6A2P12110 AC174048.1-201ENST00000603389 144 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms