Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 AL035410.1-201ENST00000427409 427 ntBASIC2.79□□□□□ -1.96
HOXC4P09017 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC2.79□□□□□ -1.96
HOXC4P09017 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.79□□□□□ -1.96
HOXC4P09017 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.79□□□□□ -1.96
HOXC4P09017 MTND1P32-201ENST00000433043 938 ntBASIC2.79□□□□□ -1.96
HOXC4P09017 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.79□□□□□ -1.96
HOXC4P09017 RPL23AP16-201ENST00000441715 421 ntBASIC2.79□□□□□ -1.96
HOXC4P09017 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.79□□□□□ -1.96
HOXC4P09017 AC007327.1-201ENST00000447461 264 ntBASIC2.79□□□□□ -1.96
HOXC4P09017 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.79□□□□□ -1.96
HOXC4P09017 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2.79□□□□□ -1.96
HOXC4P09017 SNORA59A-201ENST00000459326 152 ntBASIC2.79□□□□□ -1.96
HOXC4P09017 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.79□□□□□ -1.96
HOXC4P09017 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.79□□□□□ -1.96
HOXC4P09017 AC105914.1-201ENST00000511798 226 ntBASIC2.79□□□□□ -1.96
HOXC4P09017 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.79□□□□□ -1.96
HOXC4P09017 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.79□□□□□ -1.96
HOXC4P09017 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.79□□□□□ -1.96
HOXC4P09017 ARL2BPP5-201ENST00000523141 481 ntBASIC2.79□□□□□ -1.96
HOXC4P09017 AC239860.2-201ENST00000525886 270 ntBASIC2.79□□□□□ -1.96
HOXC4P09017 AC008015.1-201ENST00000555505 465 ntBASIC2.79□□□□□ -1.96
HOXC4P09017 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.79□□□□□ -1.96
HOXC4P09017 CYCSP39-201ENST00000565821 309 ntBASIC2.79□□□□□ -1.96
HOXC4P09017 AC110760.3-201ENST00000598794 467 ntBASIC2.79□□□□□ -1.96
HOXC4P09017 ATP1B3P1-201ENST00000605365 821 ntBASIC2.79□□□□□ -1.96
HOXC4P09017 AL360181.4-201ENST00000621752 134 ntBASIC2.79□□□□□ -1.96
HOXC4P09017 AC073348.1-201ENST00000623002 331 ntBASIC2.79□□□□□ -1.96
HOXC4P09017 AC007490.1-201ENST00000624321 703 ntBASIC2.79□□□□□ -1.96
HOXC4P09017 AC087821.2-201ENST00000637086 450 ntBASIC2.79□□□□□ -1.96
HOXC4P09017 AC103706.2-201ENST00000638080 240 ntBASIC2.79□□□□□ -1.96
HOXC4P09017 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
HOXC4P09017 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
HOXC4P09017 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.78□□□□□ -1.96
HOXC4P09017 RNU6-115P-201ENST00000364310 107 ntBASIC2.78□□□□□ -1.96
HOXC4P09017 Y_RNA.465-201ENST00000384293 102 ntBASIC2.78□□□□□ -1.96
HOXC4P09017 MIR512-1-201ENST00000384913 84 ntBASIC2.78□□□□□ -1.96
HOXC4P09017 AL360182.1-201ENST00000397433 468 ntBASIC2.78□□□□□ -1.96
HOXC4P09017 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.78□□□□□ -1.96
HOXC4P09017 RNU4-72P-201ENST00000410754 173 ntBASIC2.78□□□□□ -1.96
HOXC4P09017 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.78□□□□□ -1.96
HOXC4P09017 BMS1P22-201ENST00000414726 313 ntBASIC2.78□□□□□ -1.96
HOXC4P09017 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.78□□□□□ -1.96
HOXC4P09017 AC090960.1-201ENST00000421072 306 ntBASIC2.78□□□□□ -1.96
HOXC4P09017 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.78□□□□□ -1.96
HOXC4P09017 AL593851.1-201ENST00000426171 157 ntBASIC2.78□□□□□ -1.96
HOXC4P09017 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.78□□□□□ -1.96
HOXC4P09017 USP9YP11-201ENST00000427537 717 ntBASIC2.78□□□□□ -1.96
HOXC4P09017 AL390023.1-201ENST00000428836 262 ntBASIC2.78□□□□□ -1.96
HOXC4P09017 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC2.78□□□□□ -1.96
HOXC4P09017 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.78□□□□□ -1.96
HOXC4P09017 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.78□□□□□ -1.96
HOXC4P09017 GTF2IP7-202ENST00000436677 309 ntBASIC2.78□□□□□ -1.96
HOXC4P09017 THAP5P1-201ENST00000439089 262 ntBASIC2.78□□□□□ -1.96
HOXC4P09017 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.78□□□□□ -1.96
HOXC4P09017 MTCO3P2-201ENST00000457365 171 ntBASIC2.78□□□□□ -1.96
HOXC4P09017 RNU7-125P-201ENST00000458760 62 ntBASIC2.78□□□□□ -1.96
HOXC4P09017 AP001025.2-201ENST00000490908 477 ntBASIC2.78□□□□□ -1.96
HOXC4P09017 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.78□□□□□ -1.96
HOXC4P09017 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
HOXC4P09017 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HOXC4P09017 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.78□□□□□ -1.96
HOXC4P09017 RN7SKP132-201ENST00000516001 208 ntBASIC2.78□□□□□ -1.96
HOXC4P09017 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.78□□□□□ -1.96
HOXC4P09017 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.78□□□□□ -1.96
HOXC4P09017 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
HOXC4P09017 HPRT1P3-201ENST00000539521 576 ntBASIC2.78□□□□□ -1.96
HOXC4P09017 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
HOXC4P09017 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.78□□□□□ -1.96
HOXC4P09017 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.78□□□□□ -1.96
HOXC4P09017 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.78□□□□□ -1.96
HOXC4P09017 NBEAP1-201ENST00000554452 979 ntBASIC2.78□□□□□ -1.96
HOXC4P09017 AC087481.2-201ENST00000565492 330 ntBASIC2.78□□□□□ -1.96
HOXC4P09017 AC109446.2-201ENST00000567872 497 ntBASIC2.78□□□□□ -1.96
HOXC4P09017 MIR3912-201ENST00000577566 105 ntBASIC2.78□□□□□ -1.96
HOXC4P09017 MIR3162-201ENST00000581818 82 ntBASIC2.78□□□□□ -1.96
HOXC4P09017 PIGPP4-201ENST00000584447 307 ntBASIC2.78□□□□□ -1.96
HOXC4P09017 AC021749.1-201ENST00000604322 607 ntBASIC2.78□□□□□ -1.96
HOXC4P09017 AC006329.2-201ENST00000611491 394 ntBASIC2.78□□□□□ -1.96
HOXC4P09017 AL110115.1-201ENST00000614396 364 ntBASIC2.78□□□□□ -1.96
HOXC4P09017 AC022509.4-201ENST00000621404 572 ntBASIC2.78□□□□□ -1.96
HOXC4P09017 AC109454.4-201ENST00000623411 649 ntBASIC2.78□□□□□ -1.96
HOXC4P09017 AC007671.2-201ENST00000637344 619 ntBASIC2.78□□□□□ -1.96
HOXC4P09017 AC068137.4-201ENST00000638485 296 ntBASIC2.78□□□□□ -1.96
HOXC4P09017 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
HOXC4P09017 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
HOXC4P09017 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.78□□□□□ -1.97
HOXC4P09017 AP000526.1-201ENST00000603308 1388 ntBASIC2.77□□□□□ -1.97
HOXC4P09017 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
HOXC4P09017 Y_RNA.318-201ENST00000365131 97 ntBASIC2.77□□□□□ -1.97
HOXC4P09017 RNU1-101P-201ENST00000391171 127 ntBASIC2.77□□□□□ -1.97
HOXC4P09017 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.77□□□□□ -1.97
HOXC4P09017 AL356131.1-201ENST00000405826 414 ntBASIC2.77□□□□□ -1.97
HOXC4P09017 RNU6-757P-201ENST00000410334 100 ntBASIC2.77□□□□□ -1.97
HOXC4P09017 RNA5SP21-201ENST00000410917 96 ntBASIC2.77□□□□□ -1.97
HOXC4P09017 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.77□□□□□ -1.97
HOXC4P09017 AC099677.1-201ENST00000420575 175 ntBASIC2.77□□□□□ -1.97
HOXC4P09017 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.77□□□□□ -1.97
HOXC4P09017 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
HOXC4P09017 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.77□□□□□ -1.97
HOXC4P09017 AL513043.1-201ENST00000439124 535 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms