Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 RNU6-1298P-201ENST00000362456 101 ntBASIC6.17□□□□□ -1.42
RNF40O75150 RNU6-923P-201ENST00000364753 107 ntBASIC6.17□□□□□ -1.42
RNF40O75150 MIR521-1-201ENST00000384902 87 ntBASIC6.17□□□□□ -1.42
RNF40O75150 SNORA12.2-201ENST00000391040 156 ntBASIC6.17□□□□□ -1.42
RNF40O75150 Y_RNA.590-201ENST00000410140 107 ntBASIC6.17□□□□□ -1.42
RNF40O75150 MTCO1P39-201ENST00000426148 480 ntBASIC6.17□□□□□ -1.42
RNF40O75150 PIGFP3-201ENST00000441918 722 ntBASIC6.17□□□□□ -1.42
RNF40O75150 HIGD1AP2-201ENST00000446367 280 ntBASIC6.17□□□□□ -1.42
RNF40O75150 GEMIN2P1-201ENST00000454246 752 ntBASIC6.17□□□□□ -1.42
RNF40O75150 snoU109.4-201ENST00000458953 143 ntBASIC6.17□□□□□ -1.42
RNF40O75150 RNU6-953P-201ENST00000459154 107 ntBASIC6.17□□□□□ -1.42
RNF40O75150 RN7SKP210-201ENST00000459176 261 ntBASIC6.17□□□□□ -1.42
RNF40O75150 FPGT-203ENST00000467578 601 ntTSL 2 BASIC6.17□□□□□ -1.42
RNF40O75150 RN7SL269P-201ENST00000467795 305 ntBASIC6.17□□□□□ -1.42
RNF40O75150 RPL23AP65-201ENST00000475608 468 ntBASIC6.17□□□□□ -1.42
RNF40O75150 HMGN1P11-201ENST00000508668 303 ntBASIC6.17□□□□□ -1.42
RNF40O75150 RNU2-31P-201ENST00000516954 155 ntBASIC6.17□□□□□ -1.42
RNF40O75150 RN7SKP258-201ENST00000517151 304 ntBASIC6.17□□□□□ -1.42
RNF40O75150 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.17□□□□□ -1.42
RNF40O75150 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC6.17□□□□□ -1.42
RNF40O75150 CR383656.7-201ENST00000548164 174 ntBASIC6.17□□□□□ -1.42
RNF40O75150 AC022404.1-201ENST00000555320 273 ntBASIC6.17□□□□□ -1.42
RNF40O75150 AC104581.2-201ENST00000572227 430 ntBASIC6.17□□□□□ -1.42
RNF40O75150 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC6.17□□□□□ -1.42
RNF40O75150 PRPF19P1-201ENST00000584766 898 ntBASIC6.17□□□□□ -1.42
RNF40O75150 MIR548AC-201ENST00000585049 88 ntBASIC6.17□□□□□ -1.42
RNF40O75150 AL034351.1-201ENST00000605288 668 ntBASIC6.17□□□□□ -1.42
RNF40O75150 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RNF40O75150 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.17□□□□□ -1.42
RNF40O75150 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RNF40O75150 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
RNF40O75150 AC012254.3-201ENST00000591183 2117 ntBASIC6.17□□□□□ -1.42
RNF40O75150 OR13C1P-202ENST00000641378 2919 ntBASIC6.17□□□□□ -1.42
RNF40O75150 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
RNF40O75150 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
RNF40O75150 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
RNF40O75150 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RNF40O75150 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RNF40O75150 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC6.17□□□□□ -1.42
RNF40O75150 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
RNF40O75150 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RNF40O75150 AC097461.1-201ENST00000568928 2821 ntBASIC6.17□□□□□ -1.42
RNF40O75150 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RNF40O75150 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RNF40O75150 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RNF40O75150 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
RNF40O75150 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.16□□□□□ -1.42
RNF40O75150 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
RNF40O75150 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC6.16□□□□□ -1.42
RNF40O75150 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.16□□□□□ -1.42
RNF40O75150 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RNF40O75150 MIR375-201ENST00000362103 64 ntBASIC6.16□□□□□ -1.42
RNF40O75150 RNA5SP375-201ENST00000362975 119 ntBASIC6.16□□□□□ -1.42
RNF40O75150 Y_RNA.400-201ENST00000383963 111 ntBASIC6.16□□□□□ -1.42
RNF40O75150 Y_RNA.534-201ENST00000384599 112 ntBASIC6.16□□□□□ -1.42
RNF40O75150 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
RNF40O75150 SNORD78.2-201ENST00000391076 69 ntBASIC6.16□□□□□ -1.42
RNF40O75150 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.16□□□□□ -1.42
RNF40O75150 RPL35AP3-201ENST00000414680 288 ntBASIC6.16□□□□□ -1.42
RNF40O75150 REREP1Y-201ENST00000422655 198 ntBASIC6.16□□□□□ -1.42
RNF40O75150 HMGN2P27-201ENST00000427352 270 ntBASIC6.16□□□□□ -1.42
RNF40O75150 REREP2Y-201ENST00000439103 200 ntBASIC6.16□□□□□ -1.42
RNF40O75150 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.16□□□□□ -1.42
RNF40O75150 AC016027.4-201ENST00000450866 277 ntBASIC6.16□□□□□ -1.42
RNF40O75150 SNORD2.1-201ENST00000458762 69 ntBASIC6.16□□□□□ -1.42
RNF40O75150 RPL23AP2-201ENST00000471227 466 ntBASIC6.16□□□□□ -1.42
RNF40O75150 RPL23AP40-201ENST00000487630 390 ntBASIC6.16□□□□□ -1.42
RNF40O75150 OR7H2P-201ENST00000513483 306 ntBASIC6.16□□□□□ -1.42
RNF40O75150 RNU6-914P-201ENST00000516749 109 ntBASIC6.16□□□□□ -1.42
RNF40O75150 H3F3AP1-201ENST00000559984 334 ntBASIC6.16□□□□□ -1.42
RNF40O75150 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
RNF40O75150 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC6.16□□□□□ -1.42
RNF40O75150 MIR4660-201ENST00000583549 74 ntBASIC6.16□□□□□ -1.42
RNF40O75150 AC009314.1-201ENST00000603871 304 ntBASIC6.16□□□□□ -1.42
RNF40O75150 AL133481.2-203ENST00000607558 139 ntBASIC6.16□□□□□ -1.42
RNF40O75150 MIR6133-201ENST00000617057 108 ntBASIC6.16□□□□□ -1.42
RNF40O75150 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
RNF40O75150 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
RNF40O75150 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
RNF40O75150 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.16□□□□□ -1.42
RNF40O75150 AC018809.2-201ENST00000602436 3823 ntBASIC6.16□□□□□ -1.42
RNF40O75150 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
RNF40O75150 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
RNF40O75150 AP001284.1-201ENST00000528393 2118 ntBASIC6.16□□□□□ -1.42
RNF40O75150 AC114947.2-201ENST00000565748 2125 ntBASIC6.16□□□□□ -1.42
RNF40O75150 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RNF40O75150 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.16□□□□□ -1.42
RNF40O75150 AC027228.2-201ENST00000567141 2154 ntBASIC6.16□□□□□ -1.42
RNF40O75150 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
RNF40O75150 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
RNF40O75150 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
RNF40O75150 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
RNF40O75150 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
RNF40O75150 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
RNF40O75150 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.15□□□□□ -1.42
RNF40O75150 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC6.15□□□□□ -1.42
RNF40O75150 SNORA70.6-201ENST00000383934 134 ntBASIC6.15□□□□□ -1.42
RNF40O75150 MIR143-201ENST00000385300 106 ntBASIC6.15□□□□□ -1.42
RNF40O75150 AL391361.1-201ENST00000405580 489 ntBASIC6.15□□□□□ -1.42
RNF40O75150 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms