Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 RNU6-1003P-201ENST00000517099 105 ntBASIC3.17□□□□□ -1.9
SNX3O60493 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.17□□□□□ -1.9
SNX3O60493 AC060788.1-201ENST00000521318 469 ntBASIC3.17□□□□□ -1.9
SNX3O60493 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.17□□□□□ -1.9
SNX3O60493 AP000907.2-201ENST00000530827 353 ntBASIC3.17□□□□□ -1.9
SNX3O60493 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SNX3O60493 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.17□□□□□ -1.9
SNX3O60493 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.17□□□□□ -1.9
SNX3O60493 AL391156.1-201ENST00000554965 554 ntBASIC3.17□□□□□ -1.9
SNX3O60493 MIR5697-201ENST00000578045 78 ntBASIC3.17□□□□□ -1.9
SNX3O60493 AC105224.1-201ENST00000587055 421 ntBASIC3.17□□□□□ -1.9
SNX3O60493 OR10AB1P-201ENST00000609613 938 ntBASIC3.17□□□□□ -1.9
SNX3O60493 AC024941.1-201ENST00000612250 334 ntBASIC3.17□□□□□ -1.9
SNX3O60493 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.17□□□□□ -1.9
SNX3O60493 AC104010.1-201ENST00000616889 150 ntBASIC3.17□□□□□ -1.9
SNX3O60493 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.17□□□□□ -1.9
SNX3O60493 MIR6830-201ENST00000636015 70 ntBASIC3.17□□□□□ -1.9
SNX3O60493 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SNX3O60493 AL079305.1-201ENST00000623159 3008 ntBASIC3.17□□□□□ -1.9
SNX3O60493 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.17□□□□□ -1.9
SNX3O60493 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SNX3O60493 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SNX3O60493 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SNX3O60493 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.16□□□□□ -1.9
SNX3O60493 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SNX3O60493 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SNX3O60493 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SNX3O60493 AC126755.2-208ENST00000327792 462 ntBASIC3.16□□□□□ -1.9
SNX3O60493 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SNX3O60493 AC138969.1-213ENST00000331436 462 ntBASIC3.16□□□□□ -1.9
SNX3O60493 DEFB108F-201ENST00000344638 222 ntBASIC3.16□□□□□ -1.9
SNX3O60493 MIR372-201ENST00000362225 67 ntBASIC3.16□□□□□ -1.9
SNX3O60493 RNU4-21P-201ENST00000362802 126 ntBASIC3.16□□□□□ -1.9
SNX3O60493 RNU6-533P-201ENST00000384144 107 ntBASIC3.16□□□□□ -1.9
SNX3O60493 RNU6-432P-201ENST00000384196 109 ntBASIC3.16□□□□□ -1.9
SNX3O60493 MIR181B1-201ENST00000385240 110 ntBASIC3.16□□□□□ -1.9
SNX3O60493 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
SNX3O60493 RPL32P23-201ENST00000397237 405 ntBASIC3.16□□□□□ -1.9
SNX3O60493 AP000567.1-201ENST00000406413 156 ntBASIC3.16□□□□□ -1.9
SNX3O60493 U3.42-201ENST00000408746 214 ntBASIC3.16□□□□□ -1.9
SNX3O60493 RN7SKP156-201ENST00000410308 342 ntBASIC3.16□□□□□ -1.9
SNX3O60493 AC007390.1-201ENST00000415722 356 ntBASIC3.16□□□□□ -1.9
SNX3O60493 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.16□□□□□ -1.9
SNX3O60493 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.16□□□□□ -1.9
SNX3O60493 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.16□□□□□ -1.9
SNX3O60493 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.16□□□□□ -1.9
SNX3O60493 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.16□□□□□ -1.9
SNX3O60493 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.16□□□□□ -1.9
SNX3O60493 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.16□□□□□ -1.9
SNX3O60493 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SNX3O60493 AL592447.1-201ENST00000447592 540 ntBASIC3.16□□□□□ -1.9
SNX3O60493 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.16□□□□□ -1.9
SNX3O60493 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.16□□□□□ -1.9
SNX3O60493 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.16□□□□□ -1.9
SNX3O60493 UBE2CP3-201ENST00000502715 450 ntBASIC3.16□□□□□ -1.9
SNX3O60493 RNU1-61P-201ENST00000516107 151 ntBASIC3.16□□□□□ -1.9
SNX3O60493 RNA5SP76-201ENST00000516277 87 ntBASIC3.16□□□□□ -1.9
SNX3O60493 ERHP1-201ENST00000523006 310 ntBASIC3.16□□□□□ -1.9
SNX3O60493 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.16□□□□□ -1.9
SNX3O60493 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.16□□□□□ -1.9
SNX3O60493 PARP1P2-201ENST00000556806 195 ntBASIC3.16□□□□□ -1.9
SNX3O60493 HSPE1P5-201ENST00000561489 272 ntBASIC3.16□□□□□ -1.9
SNX3O60493 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.16□□□□□ -1.9
SNX3O60493 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.16□□□□□ -1.9
SNX3O60493 AC012065.4-201ENST00000602445 679 ntBASIC3.16□□□□□ -1.9
SNX3O60493 OR2AS2P-201ENST00000606902 342 ntBASIC3.16□□□□□ -1.9
SNX3O60493 AC012360.2-201ENST00000609349 391 ntBASIC3.16□□□□□ -1.9
SNX3O60493 AC006338.2-201ENST00000616864 791 ntBASIC3.16□□□□□ -1.9
SNX3O60493 AL159972.1-201ENST00000625150 448 ntBASIC3.16□□□□□ -1.9
SNX3O60493 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.16□□□□□ -1.9
SNX3O60493 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SNX3O60493 AC005832.2-201ENST00000538921 1430 ntBASIC3.16□□□□□ -1.9
SNX3O60493 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
SNX3O60493 AL138713.1-201ENST00000624026 2130 ntBASIC3.16□□□□□ -1.9
SNX3O60493 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.16□□□□□ -1.9
SNX3O60493 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
SNX3O60493 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
SNX3O60493 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
SNX3O60493 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.15□□□□□ -1.9
SNX3O60493 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
SNX3O60493 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.15□□□□□ -1.9
SNX3O60493 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.15□□□□□ -1.9
SNX3O60493 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
SNX3O60493 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
SNX3O60493 RPL7P25-201ENST00000404151 721 ntBASIC3.15□□□□□ -1.91
SNX3O60493 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SNX3O60493 RNU4-65P-201ENST00000410473 140 ntBASIC3.15□□□□□ -1.91
SNX3O60493 CYCSP46-201ENST00000423569 204 ntBASIC3.15□□□□□ -1.91
SNX3O60493 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.15□□□□□ -1.91
SNX3O60493 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.15□□□□□ -1.91
SNX3O60493 RPL35AP22-201ENST00000436855 335 ntBASIC3.15□□□□□ -1.91
SNX3O60493 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.15□□□□□ -1.91
SNX3O60493 AL049734.2-201ENST00000441066 616 ntBASIC3.15□□□□□ -1.91
SNX3O60493 AL590365.1-201ENST00000450788 243 ntBASIC3.15□□□□□ -1.91
SNX3O60493 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.15□□□□□ -1.91
SNX3O60493 HSPE1P6-201ENST00000479457 291 ntBASIC3.15□□□□□ -1.91
SNX3O60493 AC026979.1-201ENST00000492525 396 ntBASIC3.15□□□□□ -1.91
SNX3O60493 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.15□□□□□ -1.91
SNX3O60493 FCF1P8-201ENST00000510322 597 ntBASIC3.15□□□□□ -1.91
SNX3O60493 NPM1P41-201ENST00000512920 831 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms