Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.66□□□□□ -1.98
LSM1O15116 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.66□□□□□ -1.98
LSM1O15116 RPS29P26-201ENST00000477483 171 ntBASIC2.66□□□□□ -1.98
LSM1O15116 HSPE1P6-201ENST00000479457 291 ntBASIC2.66□□□□□ -1.98
LSM1O15116 CAB39P1-201ENST00000502277 460 ntBASIC2.66□□□□□ -1.98
LSM1O15116 CDC42P4-201ENST00000510507 563 ntBASIC2.66□□□□□ -1.98
LSM1O15116 SNORA31.11-201ENST00000516528 139 ntBASIC2.66□□□□□ -1.98
LSM1O15116 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.66□□□□□ -1.98
LSM1O15116 DEFB130C-202ENST00000530001 230 ntBASIC2.66□□□□□ -1.98
LSM1O15116 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.66□□□□□ -1.98
LSM1O15116 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.66□□□□□ -1.98
LSM1O15116 HIGD1AP17-201ENST00000554576 276 ntBASIC2.66□□□□□ -1.98
LSM1O15116 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC2.66□□□□□ -1.98
LSM1O15116 AC024220.1-201ENST00000603675 484 ntBASIC2.66□□□□□ -1.98
LSM1O15116 AL445435.1-201ENST00000604232 665 ntBASIC2.66□□□□□ -1.98
LSM1O15116 AL161756.2-201ENST00000604597 246 ntBASIC2.66□□□□□ -1.98
LSM1O15116 AC023158.2-201ENST00000614876 543 ntBASIC2.66□□□□□ -1.98
LSM1O15116 SDAD1P2-201ENST00000441308 2028 ntBASIC2.66□□□□□ -1.98
LSM1O15116 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.65□□□□□ -1.98
LSM1O15116 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.65□□□□□ -1.99
LSM1O15116 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.65□□□□□ -1.99
LSM1O15116 AP005901.5-201ENST00000545779 1796 ntBASIC2.65□□□□□ -1.99
LSM1O15116 SNORA63.3-201ENST00000362682 132 ntBASIC2.65□□□□□ -1.99
LSM1O15116 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
LSM1O15116 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.65□□□□□ -1.99
LSM1O15116 SNORA36C-201ENST00000384289 132 ntBASIC2.65□□□□□ -1.99
LSM1O15116 MIR144-201ENST00000384886 86 ntBASIC2.65□□□□□ -1.99
LSM1O15116 AL138885.1-201ENST00000405921 675 ntBASIC2.65□□□□□ -1.99
LSM1O15116 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.65□□□□□ -1.99
LSM1O15116 MTATP6P27-201ENST00000416987 621 ntBASIC2.65□□□□□ -1.99
LSM1O15116 AC013262.1-201ENST00000426710 252 ntBASIC2.65□□□□□ -1.99
LSM1O15116 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.65□□□□□ -1.99
LSM1O15116 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.65□□□□□ -1.99
LSM1O15116 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.65□□□□□ -1.99
LSM1O15116 THAP5P1-201ENST00000439089 262 ntBASIC2.65□□□□□ -1.99
LSM1O15116 NDUFAF4P2-201ENST00000445374 520 ntBASIC2.65□□□□□ -1.99
LSM1O15116 WASF1P1-201ENST00000447560 1131 ntBASIC2.65□□□□□ -1.99
LSM1O15116 snoU13.28-201ENST00000459235 104 ntBASIC2.65□□□□□ -1.99
LSM1O15116 AC114322.1-201ENST00000506771 926 ntBASIC2.65□□□□□ -1.99
LSM1O15116 AC093677.1-201ENST00000514414 678 ntBASIC2.65□□□□□ -1.99
LSM1O15116 RNU6-1282P-201ENST00000516735 96 ntBASIC2.65□□□□□ -1.99
LSM1O15116 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.65□□□□□ -1.99
LSM1O15116 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.65□□□□□ -1.99
LSM1O15116 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.65□□□□□ -1.99
LSM1O15116 NDUFS5P6-201ENST00000529136 295 ntBASIC2.65□□□□□ -1.99
LSM1O15116 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.65□□□□□ -1.99
LSM1O15116 GTF2IP8-201ENST00000560687 584 ntBASIC2.65□□□□□ -1.99
LSM1O15116 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.65□□□□□ -1.99
LSM1O15116 MYL12BP1-201ENST00000569826 507 ntBASIC2.65□□□□□ -1.99
LSM1O15116 MIR5708-201ENST00000579723 85 ntBASIC2.65□□□□□ -1.99
LSM1O15116 AL022067.1-201ENST00000602426 454 ntBASIC2.65□□□□□ -1.99
LSM1O15116 AL035413.2-201ENST00000604801 525 ntBASIC2.65□□□□□ -1.99
LSM1O15116 AP002802.2-201ENST00000605877 235 ntBASIC2.65□□□□□ -1.99
LSM1O15116 AC120053.1-201ENST00000607706 736 ntBASIC2.65□□□□□ -1.99
LSM1O15116 ATP5A1P2-202ENST00000616464 443 ntBASIC2.65□□□□□ -1.99
LSM1O15116 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.65□□□□□ -1.99
LSM1O15116 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.65□□□□□ -1.99
LSM1O15116 AC107982.1-201ENST00000507171 1300 ntBASIC2.65□□□□□ -1.99
LSM1O15116 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.64□□□□□ -1.99
LSM1O15116 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.64□□□□□ -1.99
LSM1O15116 SNORA67.1-201ENST00000364749 141 ntBASIC2.64□□□□□ -1.99
LSM1O15116 RNU6-1035P-201ENST00000384477 107 ntBASIC2.64□□□□□ -1.99
LSM1O15116 RNU2-72P-201ENST00000411175 163 ntBASIC2.64□□□□□ -1.99
LSM1O15116 AC096533.1-201ENST00000411645 353 ntBASIC2.64□□□□□ -1.99
LSM1O15116 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.64□□□□□ -1.99
LSM1O15116 PPP1R11P2-201ENST00000423543 382 ntBASIC2.64□□□□□ -1.99
LSM1O15116 ZNF736P7Y-201ENST00000425158 820 ntBASIC2.64□□□□□ -1.99
LSM1O15116 AC009414.1-201ENST00000427200 443 ntBASIC2.64□□□□□ -1.99
LSM1O15116 AC092427.1-202ENST00000430569 476 ntBASIC2.64□□□□□ -1.99
LSM1O15116 AL139132.1-201ENST00000431587 344 ntBASIC2.64□□□□□ -1.99
LSM1O15116 RPS20P5-201ENST00000434808 360 ntBASIC2.64□□□□□ -1.99
LSM1O15116 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
LSM1O15116 AC092798.1-201ENST00000458542 409 ntBASIC2.64□□□□□ -1.99
LSM1O15116 RPS27P26-201ENST00000494583 239 ntBASIC2.64□□□□□ -1.99
LSM1O15116 TTC39CP1-201ENST00000512513 755 ntBASIC2.64□□□□□ -1.99
LSM1O15116 SNORA74D-201ENST00000516404 141 ntBASIC2.64□□□□□ -1.99
LSM1O15116 SCARNA15.2-201ENST00000516409 127 ntBASIC2.64□□□□□ -1.99
LSM1O15116 RNU6-928P-201ENST00000516876 104 ntBASIC2.64□□□□□ -1.99
LSM1O15116 RNA5SP471-201ENST00000516971 106 ntBASIC2.64□□□□□ -1.99
LSM1O15116 AC090136.1-201ENST00000520009 240 ntBASIC2.64□□□□□ -1.99
LSM1O15116 AC087808.1-201ENST00000520501 361 ntBASIC2.64□□□□□ -1.99
LSM1O15116 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC2.64□□□□□ -1.99
LSM1O15116 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.64□□□□□ -1.99
LSM1O15116 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.64□□□□□ -1.99
LSM1O15116 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.64□□□□□ -1.99
LSM1O15116 MTATP6P2-201ENST00000603319 678 ntBASIC2.64□□□□□ -1.99
LSM1O15116 AC069545.1-201ENST00000605671 358 ntBASIC2.64□□□□□ -1.99
LSM1O15116 MIR8057-201ENST00000620957 69 ntBASIC2.64□□□□□ -1.99
LSM1O15116 AC079597.1-201ENST00000624306 508 ntBASIC2.64□□□□□ -1.99
LSM1O15116 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.64□□□□□ -1.99
LSM1O15116 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.64□□□□□ -1.99
LSM1O15116 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
LSM1O15116 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.63□□□□□ -1.99
LSM1O15116 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.63□□□□□ -1.99
LSM1O15116 ANKRD36P1-201ENST00000344424 659 ntBASIC2.63□□□□□ -1.99
LSM1O15116 RNA5SP354-201ENST00000391247 136 ntBASIC2.63□□□□□ -1.99
LSM1O15116 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.63□□□□□ -1.99
LSM1O15116 CCDC58P2-201ENST00000417131 366 ntBASIC2.63□□□□□ -1.99
LSM1O15116 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC2.63□□□□□ -1.99
LSM1O15116 RNF2P1-201ENST00000442955 1010 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms