Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 GTF2IP22-201ENST00000554443 182 ntBASIC3.32□□□□□ -1.88
CCDC188H7C350 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC188H7C350 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC188H7C350 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC188H7C350 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.32□□□□□ -1.88
CCDC188H7C350 RPL23AP84-201ENST00000571193 464 ntBASIC3.32□□□□□ -1.88
CCDC188H7C350 AC107214.2-201ENST00000608204 634 ntBASIC3.32□□□□□ -1.88
CCDC188H7C350 AL355493.4-201ENST00000618530 292 ntBASIC3.32□□□□□ -1.88
CCDC188H7C350 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC188H7C350 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC188H7C350 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC188H7C350 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC188H7C350 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC188H7C350 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC188H7C350 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC188H7C350 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.31□□□□□ -1.88
CCDC188H7C350 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC188H7C350 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CCDC188H7C350 AC009902.3-201ENST00000606235 2172 ntBASIC3.31□□□□□ -1.88
CCDC188H7C350 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC188H7C350 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC188H7C350 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC188H7C350 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC188H7C350 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC188H7C350 SNORA1.3-201ENST00000384676 136 ntBASIC3.31□□□□□ -1.88
CCDC188H7C350 RNU6-1197P-201ENST00000391183 107 ntBASIC3.31□□□□□ -1.88
CCDC188H7C350 PTMAP2-201ENST00000397627 327 ntBASIC3.31□□□□□ -1.88
CCDC188H7C350 BMS1P22-201ENST00000414726 313 ntBASIC3.31□□□□□ -1.88
CCDC188H7C350 UBE2FP1-201ENST00000416536 447 ntBASIC3.31□□□□□ -1.88
CCDC188H7C350 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC188H7C350 AC012498.1-201ENST00000424037 437 ntBASIC3.31□□□□□ -1.88
CCDC188H7C350 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC188H7C350 AC007389.2-201ENST00000434630 306 ntBASIC3.31□□□□□ -1.88
CCDC188H7C350 HIGD1AP11-201ENST00000438361 280 ntBASIC3.31□□□□□ -1.88
CCDC188H7C350 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC188H7C350 MTND5P2-201ENST00000442927 1142 ntBASIC3.31□□□□□ -1.88
CCDC188H7C350 TPT1P14-201ENST00000448018 505 ntBASIC3.31□□□□□ -1.88
CCDC188H7C350 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.31□□□□□ -1.88
CCDC188H7C350 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC188H7C350 AC106707.2-201ENST00000484182 374 ntBASIC3.31□□□□□ -1.88
CCDC188H7C350 LTV1P1-201ENST00000510683 1237 ntBASIC3.31□□□□□ -1.88
CCDC188H7C350 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC188H7C350 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC188H7C350 AP000907.2-201ENST00000530827 353 ntBASIC3.31□□□□□ -1.88
CCDC188H7C350 LRRC34P1-201ENST00000542742 915 ntBASIC3.31□□□□□ -1.88
CCDC188H7C350 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
CCDC188H7C350 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC188H7C350 ZNF415P1-201ENST00000582279 1166 ntBASIC3.31□□□□□ -1.88
CCDC188H7C350 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC188H7C350 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC188H7C350 AC021171.1-201ENST00000603137 706 ntBASIC3.31□□□□□ -1.88
CCDC188H7C350 AC018714.1-201ENST00000605028 208 ntBASIC3.31□□□□□ -1.88
CCDC188H7C350 AC073657.2-201ENST00000605661 303 ntBASIC3.31□□□□□ -1.88
CCDC188H7C350 uc_338.25-201ENST00000613756 156 ntBASIC3.31□□□□□ -1.88
CCDC188H7C350 AC091304.6-201ENST00000619761 202 ntBASIC3.31□□□□□ -1.88
CCDC188H7C350 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC188H7C350 AC009093.8-201ENST00000641769 292 ntBASIC3.31□□□□□ -1.88
CCDC188H7C350 FAM35BP-202ENST00000497389 3337 ntBASIC3.31□□□□□ -1.88
CCDC188H7C350 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC188H7C350 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.3□□□□□ -1.88
CCDC188H7C350 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC188H7C350 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC188H7C350 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC188H7C350 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC188H7C350 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC188H7C350 AL391994.1-201ENST00000254724 282 ntBASIC3.3□□□□□ -1.88
CCDC188H7C350 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CCDC188H7C350 SNORA23-201ENST00000365128 182 ntBASIC3.3□□□□□ -1.88
CCDC188H7C350 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
CCDC188H7C350 U8.14-201ENST00000390843 143 ntBASIC3.3□□□□□ -1.88
CCDC188H7C350 AC119751.3-201ENST00000399720 670 ntBASIC3.3□□□□□ -1.88
CCDC188H7C350 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
CCDC188H7C350 HMGN1P24-201ENST00000412282 298 ntBASIC3.3□□□□□ -1.88
CCDC188H7C350 MTND1P21-201ENST00000412991 285 ntBASIC3.3□□□□□ -1.88
CCDC188H7C350 AC018630.2-202ENST00000422992 927 ntBASIC3.3□□□□□ -1.88
CCDC188H7C350 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC188H7C350 AC233728.2-201ENST00000425348 757 ntBASIC3.3□□□□□ -1.88
CCDC188H7C350 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.3□□□□□ -1.88
CCDC188H7C350 AC073063.1-201ENST00000434352 607 ntBASIC3.3□□□□□ -1.88
CCDC188H7C350 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC188H7C350 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC188H7C350 RPL21P23-201ENST00000446654 460 ntBASIC3.3□□□□□ -1.88
CCDC188H7C350 AL590664.1-201ENST00000448065 339 ntBASIC3.3□□□□□ -1.88
CCDC188H7C350 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC188H7C350 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC188H7C350 AL359385.1-201ENST00000456509 365 ntBASIC3.3□□□□□ -1.88
CCDC188H7C350 ATG12P2-201ENST00000456830 416 ntBASIC3.3□□□□□ -1.88
CCDC188H7C350 AC093663.1-201ENST00000497190 394 ntBASIC3.3□□□□□ -1.88
CCDC188H7C350 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC188H7C350 AC021678.1-201ENST00000505195 936 ntBASIC3.3□□□□□ -1.88
CCDC188H7C350 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.3□□□□□ -1.88
CCDC188H7C350 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC188H7C350 RNU6-390P-201ENST00000516259 103 ntBASIC3.3□□□□□ -1.88
CCDC188H7C350 RNU1-95P-201ENST00000516357 160 ntBASIC3.3□□□□□ -1.88
CCDC188H7C350 RNU6-1256P-201ENST00000516539 103 ntBASIC3.3□□□□□ -1.88
CCDC188H7C350 RNU1-128P-201ENST00000516704 160 ntBASIC3.3□□□□□ -1.88
CCDC188H7C350 SNORA31.22-201ENST00000517204 135 ntBASIC3.3□□□□□ -1.88
CCDC188H7C350 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC188H7C350 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.3□□□□□ -1.88
CCDC188H7C350 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms