Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC85CA6NKD9 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
CCDC85CA6NKD9 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC85CA6NKD9 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC85CA6NKD9 GABPAP-201ENST00000419271 1356 ntBASIC4.91□□□□□ -1.62
CCDC85CA6NKD9 SDAD1P2-201ENST00000441308 2028 ntBASIC4.9□□□□□ -1.62
CCDC85CA6NKD9 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CCDC85CA6NKD9 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CCDC85CA6NKD9 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
CCDC85CA6NKD9 CBX3P1-201ENST00000325243 554 ntBASIC4.9□□□□□ -1.63
CCDC85CA6NKD9 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CCDC85CA6NKD9 RNU6-1068P-201ENST00000410958 103 ntBASIC4.9□□□□□ -1.63
CCDC85CA6NKD9 RNU2-41P-201ENST00000410991 178 ntBASIC4.9□□□□□ -1.63
CCDC85CA6NKD9 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.9□□□□□ -1.63
CCDC85CA6NKD9 AL139095.3-201ENST00000419672 1203 ntBASIC4.9□□□□□ -1.63
CCDC85CA6NKD9 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.9□□□□□ -1.63
CCDC85CA6NKD9 SRIP2-201ENST00000428470 166 ntBASIC4.9□□□□□ -1.63
CCDC85CA6NKD9 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.9□□□□□ -1.63
CCDC85CA6NKD9 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.9□□□□□ -1.63
CCDC85CA6NKD9 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.9□□□□□ -1.63
CCDC85CA6NKD9 AP000852.1-201ENST00000472460 573 ntBASIC4.9□□□□□ -1.63
CCDC85CA6NKD9 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.9□□□□□ -1.63
CCDC85CA6NKD9 AC018710.1-201ENST00000506509 158 ntBASIC4.9□□□□□ -1.63
CCDC85CA6NKD9 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.9□□□□□ -1.63
CCDC85CA6NKD9 AC099522.1-202ENST00000514718 367 ntBASIC4.9□□□□□ -1.63
CCDC85CA6NKD9 RNA5SP401-201ENST00000515920 127 ntBASIC4.9□□□□□ -1.63
CCDC85CA6NKD9 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.9□□□□□ -1.63
CCDC85CA6NKD9 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.9□□□□□ -1.63
CCDC85CA6NKD9 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.9□□□□□ -1.63
CCDC85CA6NKD9 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.9□□□□□ -1.63
CCDC85CA6NKD9 AF038458.1-201ENST00000588406 262 ntBASIC4.9□□□□□ -1.63
CCDC85CA6NKD9 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.9□□□□□ -1.63
CCDC85CA6NKD9 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.9□□□□□ -1.63
CCDC85CA6NKD9 AC233309.1-201ENST00000619522 751 ntBASIC4.9□□□□□ -1.63
CCDC85CA6NKD9 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.9□□□□□ -1.63
CCDC85CA6NKD9 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
CCDC85CA6NKD9 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.9□□□□□ -1.63
CCDC85CA6NKD9 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.9□□□□□ -1.63
CCDC85CA6NKD9 Z95331.1-201ENST00000623075 23112 ntBASIC4.9□□□□□ -1.63
CCDC85CA6NKD9 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CCDC85CA6NKD9 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC85CA6NKD9 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC85CA6NKD9 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC85CA6NKD9 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC85CA6NKD9 Y_RNA.72-201ENST00000362894 103 ntBASIC4.89□□□□□ -1.63
CCDC85CA6NKD9 RNU6-179P-201ENST00000363350 107 ntBASIC4.89□□□□□ -1.63
CCDC85CA6NKD9 RNA5SP235-201ENST00000365411 114 ntBASIC4.89□□□□□ -1.63
CCDC85CA6NKD9 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC85CA6NKD9 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CCDC85CA6NKD9 TXNP7-201ENST00000406296 293 ntBASIC4.89□□□□□ -1.63
CCDC85CA6NKD9 RNU6-193P-201ENST00000410977 107 ntBASIC4.89□□□□□ -1.63
CCDC85CA6NKD9 RNU6-387P-201ENST00000411331 105 ntBASIC4.89□□□□□ -1.63
CCDC85CA6NKD9 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.89□□□□□ -1.63
CCDC85CA6NKD9 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC4.89□□□□□ -1.63
CCDC85CA6NKD9 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.89□□□□□ -1.63
CCDC85CA6NKD9 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.89□□□□□ -1.63
CCDC85CA6NKD9 RPL7AP49-201ENST00000429522 581 ntBASIC4.89□□□□□ -1.63
CCDC85CA6NKD9 AL591438.1-201ENST00000433508 581 ntBASIC4.89□□□□□ -1.63
CCDC85CA6NKD9 RPL26P6-201ENST00000440913 438 ntBASIC4.89□□□□□ -1.63
CCDC85CA6NKD9 CYCSP35-201ENST00000451978 304 ntBASIC4.89□□□□□ -1.63
CCDC85CA6NKD9 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.89□□□□□ -1.63
CCDC85CA6NKD9 RPS20P20-201ENST00000460498 340 ntBASIC4.89□□□□□ -1.63
CCDC85CA6NKD9 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC4.89□□□□□ -1.63
CCDC85CA6NKD9 MTCO2P30-201ENST00000503662 364 ntBASIC4.89□□□□□ -1.63
CCDC85CA6NKD9 AC098799.2-201ENST00000509466 868 ntBASIC4.89□□□□□ -1.63
CCDC85CA6NKD9 AC114781.4-201ENST00000513707 639 ntBASIC4.89□□□□□ -1.63
CCDC85CA6NKD9 Vault.1-201ENST00000516474 102 ntBASIC4.89□□□□□ -1.63
CCDC85CA6NKD9 CENPUP1-201ENST00000526649 1202 ntBASIC4.89□□□□□ -1.63
CCDC85CA6NKD9 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.89□□□□□ -1.63
CCDC85CA6NKD9 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.89□□□□□ -1.63
CCDC85CA6NKD9 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.89□□□□□ -1.63
CCDC85CA6NKD9 OR4H12P-201ENST00000556269 907 ntBASIC4.89□□□□□ -1.63
CCDC85CA6NKD9 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.89□□□□□ -1.63
CCDC85CA6NKD9 AC005730.3-201ENST00000583067 366 ntBASIC4.89□□□□□ -1.63
CCDC85CA6NKD9 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.89□□□□□ -1.63
CCDC85CA6NKD9 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.89□□□□□ -1.63
CCDC85CA6NKD9 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.89□□□□□ -1.63
CCDC85CA6NKD9 AL360181.4-201ENST00000621752 134 ntBASIC4.89□□□□□ -1.63
CCDC85CA6NKD9 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.89□□□□□ -1.63
CCDC85CA6NKD9 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.89□□□□□ -1.63
CCDC85CA6NKD9 AL133243.3-201ENST00000617415 3004 ntBASIC4.89□□□□□ -1.63
CCDC85CA6NKD9 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.89□□□□□ -1.63
CCDC85CA6NKD9 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.89□□□□□ -1.63
CCDC85CA6NKD9 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC85CA6NKD9 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CCDC85CA6NKD9 AL353746.1-201ENST00000566293 6881 ntBASIC4.88□□□□□ -1.63
CCDC85CA6NKD9 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC85CA6NKD9 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC85CA6NKD9 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.88□□□□□ -1.63
CCDC85CA6NKD9 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.88□□□□□ -1.63
CCDC85CA6NKD9 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC85CA6NKD9 Y_RNA.160-201ENST00000363677 92 ntBASIC4.88□□□□□ -1.63
CCDC85CA6NKD9 SNORA62.1-201ENST00000364287 154 ntBASIC4.88□□□□□ -1.63
CCDC85CA6NKD9 RNU6-61P-201ENST00000365528 109 ntBASIC4.88□□□□□ -1.63
CCDC85CA6NKD9 Y_RNA.510-201ENST00000384511 114 ntBASIC4.88□□□□□ -1.63
CCDC85CA6NKD9 MIR3065-201ENST00000390137 79 ntBASIC4.88□□□□□ -1.63
CCDC85CA6NKD9 U3.32-201ENST00000408116 212 ntBASIC4.88□□□□□ -1.63
CCDC85CA6NKD9 RNU2-29P-201ENST00000410423 189 ntBASIC4.88□□□□□ -1.63
CCDC85CA6NKD9 RPS23P10-201ENST00000416185 486 ntBASIC4.88□□□□□ -1.63
CCDC85CA6NKD9 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms