Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 AC048347.1-201ENST00000624621 427 ntBASIC4.62□□□□□ -1.67
CCDC163A0A0D9SF12 RNA5SP196-201ENST00000625967 102 ntBASIC4.62□□□□□ -1.67
CCDC163A0A0D9SF12 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.62□□□□□ -1.67
CCDC163A0A0D9SF12 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC163A0A0D9SF12 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.62□□□□□ -1.67
CCDC163A0A0D9SF12 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
CCDC163A0A0D9SF12 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCDC163A0A0D9SF12 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.62□□□□□ -1.67
CCDC163A0A0D9SF12 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
CCDC163A0A0D9SF12 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC163A0A0D9SF12 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC163A0A0D9SF12 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
CCDC163A0A0D9SF12 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CCDC163A0A0D9SF12 Y_RNA.142-201ENST00000363491 102 ntBASIC4.61□□□□□ -1.67
CCDC163A0A0D9SF12 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC163A0A0D9SF12 RNU6-38P-201ENST00000384085 107 ntBASIC4.61□□□□□ -1.67
CCDC163A0A0D9SF12 SNORA36C-201ENST00000384289 132 ntBASIC4.61□□□□□ -1.67
CCDC163A0A0D9SF12 RNU2-37P-201ENST00000410695 177 ntBASIC4.61□□□□□ -1.67
CCDC163A0A0D9SF12 AC092809.3-201ENST00000415453 231 ntBASIC4.61□□□□□ -1.67
CCDC163A0A0D9SF12 AC245054.1-201ENST00000420944 258 ntBASIC4.61□□□□□ -1.67
CCDC163A0A0D9SF12 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC163A0A0D9SF12 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC163A0A0D9SF12 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC163A0A0D9SF12 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC163A0A0D9SF12 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC4.61□□□□□ -1.67
CCDC163A0A0D9SF12 RNU6-333P-201ENST00000459117 107 ntBASIC4.61□□□□□ -1.67
CCDC163A0A0D9SF12 RN7SL604P-201ENST00000492589 296 ntBASIC4.61□□□□□ -1.67
CCDC163A0A0D9SF12 HMGB1P22-201ENST00000505315 124 ntBASIC4.61□□□□□ -1.67
CCDC163A0A0D9SF12 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC163A0A0D9SF12 RNU6-352P-201ENST00000516908 107 ntBASIC4.61□□□□□ -1.67
CCDC163A0A0D9SF12 IGLVIV-65-201ENST00000517313 360 ntBASIC4.61□□□□□ -1.67
CCDC163A0A0D9SF12 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.61□□□□□ -1.67
CCDC163A0A0D9SF12 AC078814.3-201ENST00000553036 491 ntBASIC4.61□□□□□ -1.67
CCDC163A0A0D9SF12 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.61□□□□□ -1.67
CCDC163A0A0D9SF12 MIR4660-201ENST00000583549 74 ntBASIC4.61□□□□□ -1.67
CCDC163A0A0D9SF12 AC008521.1-201ENST00000587471 187 ntBASIC4.61□□□□□ -1.67
CCDC163A0A0D9SF12 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC163A0A0D9SF12 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC163A0A0D9SF12 ARF4P1-201ENST00000605447 541 ntBASIC4.61□□□□□ -1.67
CCDC163A0A0D9SF12 AC012409.4-201ENST00000612923 249 ntBASIC4.61□□□□□ -1.67
CCDC163A0A0D9SF12 AL390240.1-201ENST00000612950 384 ntBASIC4.61□□□□□ -1.67
CCDC163A0A0D9SF12 AL136221.1-201ENST00000621449 509 ntBASIC4.61□□□□□ -1.67
CCDC163A0A0D9SF12 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC163A0A0D9SF12 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC163A0A0D9SF12 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
CCDC163A0A0D9SF12 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC163A0A0D9SF12 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.61□□□□□ -1.67
CCDC163A0A0D9SF12 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC163A0A0D9SF12 AP004289.2-201ENST00000444413 1457 ntBASIC4.61□□□□□ -1.67
CCDC163A0A0D9SF12 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.61□□□□□ -1.67
CCDC163A0A0D9SF12 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC163A0A0D9SF12 LINC01355-201ENST00000566551 5444 ntBASIC4.61□□□□□ -1.67
CCDC163A0A0D9SF12 USP8P1-201ENST00000494673 3183 ntBASIC4.61□□□□□ -1.67
CCDC163A0A0D9SF12 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC163A0A0D9SF12 OR4G2P-202ENST00000641004 1759 ntBASIC4.6□□□□□ -1.67
CCDC163A0A0D9SF12 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.6□□□□□ -1.67
CCDC163A0A0D9SF12 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC163A0A0D9SF12 PRO1804-201ENST00000623780 2050 ntBASIC4.6□□□□□ -1.67
CCDC163A0A0D9SF12 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.6□□□□□ -1.67
CCDC163A0A0D9SF12 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
CCDC163A0A0D9SF12 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
CCDC163A0A0D9SF12 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC163A0A0D9SF12 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC163A0A0D9SF12 RNU6-190P-201ENST00000384154 102 ntBASIC4.6□□□□□ -1.67
CCDC163A0A0D9SF12 RNU6-550P-201ENST00000391057 101 ntBASIC4.6□□□□□ -1.67
CCDC163A0A0D9SF12 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC163A0A0D9SF12 RNU2-41P-201ENST00000410991 178 ntBASIC4.6□□□□□ -1.67
CCDC163A0A0D9SF12 RNU6-387P-201ENST00000411331 105 ntBASIC4.6□□□□□ -1.67
CCDC163A0A0D9SF12 RPL23AP26-201ENST00000412728 464 ntBASIC4.6□□□□□ -1.67
CCDC163A0A0D9SF12 COX5BP7-201ENST00000414780 274 ntBASIC4.6□□□□□ -1.67
CCDC163A0A0D9SF12 TMSB10P2-201ENST00000416049 131 ntBASIC4.6□□□□□ -1.67
CCDC163A0A0D9SF12 BTF3L4P3-201ENST00000418879 476 ntBASIC4.6□□□□□ -1.67
CCDC163A0A0D9SF12 AL353678.1-201ENST00000422735 741 ntBASIC4.6□□□□□ -1.67
CCDC163A0A0D9SF12 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC4.6□□□□□ -1.67
CCDC163A0A0D9SF12 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.6□□□□□ -1.67
CCDC163A0A0D9SF12 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC163A0A0D9SF12 AL590639.1-201ENST00000456484 337 ntBASIC4.6□□□□□ -1.67
CCDC163A0A0D9SF12 AC007547.1-201ENST00000462177 490 ntBASIC4.6□□□□□ -1.67
CCDC163A0A0D9SF12 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC163A0A0D9SF12 AC105137.1-201ENST00000484355 562 ntBASIC4.6□□□□□ -1.67
CCDC163A0A0D9SF12 AC110792.1-201ENST00000491826 472 ntBASIC4.6□□□□□ -1.67
CCDC163A0A0D9SF12 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC163A0A0D9SF12 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
CCDC163A0A0D9SF12 RNU6-677P-201ENST00000516914 101 ntBASIC4.6□□□□□ -1.67
CCDC163A0A0D9SF12 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.6□□□□□ -1.67
CCDC163A0A0D9SF12 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.6□□□□□ -1.67
CCDC163A0A0D9SF12 AC107953.1-201ENST00000522216 297 ntBASIC4.6□□□□□ -1.67
CCDC163A0A0D9SF12 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.6□□□□□ -1.67
CCDC163A0A0D9SF12 AC040958.1-201ENST00000561102 201 ntBASIC4.6□□□□□ -1.67
CCDC163A0A0D9SF12 AC106782.4-201ENST00000568264 210 ntBASIC4.6□□□□□ -1.67
CCDC163A0A0D9SF12 AC034105.4-201ENST00000568304 277 ntBASIC4.6□□□□□ -1.67
CCDC163A0A0D9SF12 MIR5583-1-201ENST00000580941 59 ntBASIC4.6□□□□□ -1.67
CCDC163A0A0D9SF12 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC163A0A0D9SF12 BDH2P1-201ENST00000602288 736 ntBASIC4.6□□□□□ -1.67
CCDC163A0A0D9SF12 AC245389.1-201ENST00000605141 529 ntBASIC4.6□□□□□ -1.67
CCDC163A0A0D9SF12 MIR92B-201ENST00000607575 96 ntBASIC4.6□□□□□ -1.67
CCDC163A0A0D9SF12 AC006023.2-201ENST00000609916 167 ntBASIC4.6□□□□□ -1.67
CCDC163A0A0D9SF12 AC009248.2-201ENST00000619826 254 ntBASIC4.6□□□□□ -1.67
CCDC163A0A0D9SF12 AL360181.4-201ENST00000621752 134 ntBASIC4.6□□□□□ -1.67
CCDC163A0A0D9SF12 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms