Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
GPC6Q9Y625 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
GPC6Q9Y625 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.26□□□□□ -1.57
GPC6Q9Y625 AL391987.6-201ENST00000305671 199 ntBASIC5.26□□□□□ -1.57
GPC6Q9Y625 AL159987.1-201ENST00000347911 293 ntBASIC5.26□□□□□ -1.57
GPC6Q9Y625 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
GPC6Q9Y625 RNU6-1155P-201ENST00000363554 107 ntBASIC5.26□□□□□ -1.57
GPC6Q9Y625 Y_RNA.180-201ENST00000363867 113 ntBASIC5.26□□□□□ -1.57
GPC6Q9Y625 Y_RNA.183-201ENST00000363882 113 ntBASIC5.26□□□□□ -1.57
GPC6Q9Y625 RNU6-1317P-201ENST00000364582 104 ntBASIC5.26□□□□□ -1.57
GPC6Q9Y625 MIR215-201ENST00000384858 110 ntBASIC5.26□□□□□ -1.57
GPC6Q9Y625 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
GPC6Q9Y625 AL109941.1-201ENST00000401925 229 ntBASIC5.26□□□□□ -1.57
GPC6Q9Y625 AL133388.1-201ENST00000404509 287 ntBASIC5.26□□□□□ -1.57
GPC6Q9Y625 RNU6-1203P-201ENST00000410703 110 ntBASIC5.26□□□□□ -1.57
GPC6Q9Y625 RNU6-130P-201ENST00000411112 103 ntBASIC5.26□□□□□ -1.57
GPC6Q9Y625 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
GPC6Q9Y625 ELOCP18-201ENST00000434209 337 ntBASIC5.26□□□□□ -1.57
GPC6Q9Y625 AC004383.1-201ENST00000438135 289 ntBASIC5.26□□□□□ -1.57
GPC6Q9Y625 AL121871.1-201ENST00000443413 436 ntBASIC5.26□□□□□ -1.57
GPC6Q9Y625 HLA-DPA3-207ENST00000454398 229 ntBASIC5.26□□□□□ -1.57
GPC6Q9Y625 AC133134.1-201ENST00000466800 359 ntBASIC5.26□□□□□ -1.57
GPC6Q9Y625 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.26□□□□□ -1.57
GPC6Q9Y625 RPS4XP20-201ENST00000505751 772 ntBASIC5.26□□□□□ -1.57
GPC6Q9Y625 AC008958.1-201ENST00000511047 682 ntBASIC5.26□□□□□ -1.57
GPC6Q9Y625 NDUFB4P9-201ENST00000511646 388 ntBASIC5.26□□□□□ -1.57
GPC6Q9Y625 AC114781.3-201ENST00000512083 142 ntBASIC5.26□□□□□ -1.57
GPC6Q9Y625 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.26□□□□□ -1.57
GPC6Q9Y625 Y_RNA.700-201ENST00000516806 100 ntBASIC5.26□□□□□ -1.57
GPC6Q9Y625 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.26□□□□□ -1.57
GPC6Q9Y625 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC5.26□□□□□ -1.57
GPC6Q9Y625 DEFB108E-201ENST00000524692 240 ntBASIC5.26□□□□□ -1.57
GPC6Q9Y625 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.26□□□□□ -1.57
GPC6Q9Y625 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.26□□□□□ -1.57
GPC6Q9Y625 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
GPC6Q9Y625 AC122688.1-201ENST00000541494 223 ntBASIC5.26□□□□□ -1.57
GPC6Q9Y625 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC5.26□□□□□ -1.57
GPC6Q9Y625 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.26□□□□□ -1.57
GPC6Q9Y625 AC005951.2-201ENST00000576282 495 ntBASIC5.26□□□□□ -1.57
GPC6Q9Y625 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.26□□□□□ -1.57
GPC6Q9Y625 AP001282.2-201ENST00000616149 309 ntBASIC5.26□□□□□ -1.57
GPC6Q9Y625 MIR6778-201ENST00000617912 73 ntBASIC5.26□□□□□ -1.57
GPC6Q9Y625 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.26□□□□□ -1.57
GPC6Q9Y625 MIR1910-201ENST00000636955 80 ntBASIC5.26□□□□□ -1.57
GPC6Q9Y625 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.26□□□□□ -1.57
GPC6Q9Y625 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
GPC6Q9Y625 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
GPC6Q9Y625 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
GPC6Q9Y625 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
GPC6Q9Y625 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
GPC6Q9Y625 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.26□□□□□ -1.57
GPC6Q9Y625 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
GPC6Q9Y625 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
GPC6Q9Y625 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
GPC6Q9Y625 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
GPC6Q9Y625 HSPA8P1-201ENST00000425843 1833 ntBASIC5.25□□□□□ -1.57
GPC6Q9Y625 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
GPC6Q9Y625 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
GPC6Q9Y625 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
GPC6Q9Y625 RNU1-76P-201ENST00000362903 159 ntBASIC5.25□□□□□ -1.57
GPC6Q9Y625 Y_RNA.518-201ENST00000384552 113 ntBASIC5.25□□□□□ -1.57
GPC6Q9Y625 RNU6-146P-201ENST00000384602 108 ntBASIC5.25□□□□□ -1.57
GPC6Q9Y625 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
GPC6Q9Y625 RNU2-14P-201ENST00000411053 191 ntBASIC5.25□□□□□ -1.57
GPC6Q9Y625 CYCSP33-201ENST00000414485 327 ntBASIC5.25□□□□□ -1.57
GPC6Q9Y625 AL451062.2-201ENST00000427515 271 ntBASIC5.25□□□□□ -1.57
GPC6Q9Y625 AL592045.1-201ENST00000429867 352 ntBASIC5.25□□□□□ -1.57
GPC6Q9Y625 AC004938.1-201ENST00000438468 308 ntBASIC5.25□□□□□ -1.57
GPC6Q9Y625 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.25□□□□□ -1.57
GPC6Q9Y625 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.25□□□□□ -1.57
GPC6Q9Y625 NDUFB1P2-201ENST00000449477 176 ntBASIC5.25□□□□□ -1.57
GPC6Q9Y625 RPS15AP34-201ENST00000487776 387 ntBASIC5.25□□□□□ -1.57
GPC6Q9Y625 AC009120.1-201ENST00000493458 473 ntBASIC5.25□□□□□ -1.57
GPC6Q9Y625 RNU6-1095P-201ENST00000516148 108 ntBASIC5.25□□□□□ -1.57
GPC6Q9Y625 RNU6-941P-201ENST00000516346 108 ntBASIC5.25□□□□□ -1.57
GPC6Q9Y625 IGKV2-23-201ENST00000518729 323 ntBASIC5.25□□□□□ -1.57
GPC6Q9Y625 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.25□□□□□ -1.57
GPC6Q9Y625 LRRC37A5P-203ENST00000580181 585 ntBASIC5.25□□□□□ -1.57
GPC6Q9Y625 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC5.25□□□□□ -1.57
GPC6Q9Y625 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC5.25□□□□□ -1.57
GPC6Q9Y625 AC006557.5-201ENST00000603126 811 ntBASIC5.25□□□□□ -1.57
GPC6Q9Y625 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.25□□□□□ -1.57
GPC6Q9Y625 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC5.25□□□□□ -1.57
GPC6Q9Y625 AC090607.5-201ENST00000615692 224 ntBASIC5.25□□□□□ -1.57
GPC6Q9Y625 AL731566.2-201ENST00000618971 317 ntBASIC5.25□□□□□ -1.57
GPC6Q9Y625 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.25□□□□□ -1.57
GPC6Q9Y625 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC5.25□□□□□ -1.57
GPC6Q9Y625 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.25□□□□□ -1.57
GPC6Q9Y625 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.25□□□□□ -1.57
GPC6Q9Y625 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
GPC6Q9Y625 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
GPC6Q9Y625 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
GPC6Q9Y625 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
GPC6Q9Y625 PRO1804-201ENST00000623780 2050 ntBASIC5.25□□□□□ -1.57
GPC6Q9Y625 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
GPC6Q9Y625 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.25□□□□□ -1.57
GPC6Q9Y625 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
GPC6Q9Y625 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
GPC6Q9Y625 EOGT-210ENST00000615922 1931 ntBASIC5.25□□□□□ -1.57
GPC6Q9Y625 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms